BLASTX nr result

ID: Glycyrrhiza24_contig00011567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011567
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   192   4e-47
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   189   3e-46
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   165   8e-39
ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220...   147   2e-33
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              142   4e-32

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  192 bits (489), Expect = 4e-47
 Identities = 113/219 (51%), Positives = 138/219 (63%)
 Frame = -2

Query: 659 LSLLLSPNAPVLTXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXHLPKSRKLKPSQN 480
           LSLLL+PNAPV T                                     +  + + S  
Sbjct: 83  LSLLLAPNAPVFTLFTPISFLSFLRSLRRSCKAHSHPGPAQDNSMNRKRKRPGRGRASNP 142

Query: 479 DDVDDNPSDTQQQXXXXXXXXXXXXXXXVMFLIHLHRFPDSLKSLVQTISEVPLMALESC 300
            + DD+P DT  Q               VM LIHL+RFP++LKSL+QT++E+P+ +L++C
Sbjct: 143 QNDDDSP-DTGSQHDPRVLLRVLEKLVKVMGLIHLNRFPETLKSLIQTVAEIPVTSLDTC 201

Query: 299 GNTSNYSKLVNLCSRVLKEVLRPEHGEPRDTTAEVLKSLSSLVLMPKSLARTFAIGFVTS 120
           GN + YS+L++LCS VLKEVL+ EHGEP +T AEVLKSL SLVLM KSLARTFAIGFVT 
Sbjct: 202 GNAAVYSRLLSLCSHVLKEVLKSEHGEPSNTAAEVLKSLCSLVLMAKSLARTFAIGFVTG 261

Query: 119 LARDSDEEVKKALVNFPRYLAMKAPDKAEPRALAVDSIM 3
           L+   D  VKKALVNFPRYLA KAP+KAEPRALAVDSIM
Sbjct: 262 LSNQCD-GVKKALVNFPRYLAKKAPEKAEPRALAVDSIM 299


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  189 bits (481), Expect = 3e-46
 Identities = 110/219 (50%), Positives = 136/219 (62%)
 Frame = -2

Query: 659 LSLLLSPNAPVLTXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXHLPKSRKLKPSQN 480
           LSLLL+PNAPV T                                     +  + +    
Sbjct: 93  LSLLLAPNAPVFTLFTPMSFLSFLRSLRRSCKAHSHPGPAQDNSQNGKRKRPGRGRAKNP 152

Query: 479 DDVDDNPSDTQQQXXXXXXXXXXXXXXXVMFLIHLHRFPDSLKSLVQTISEVPLMALESC 300
            + DD+P DT  Q               VM LIHL+RFP++LKSL+QT++E+P+ +L +C
Sbjct: 153 QNEDDSP-DTSSQHDPRVLLRVLEKLVEVMGLIHLNRFPETLKSLIQTVAEIPVTSLNTC 211

Query: 299 GNTSNYSKLVNLCSRVLKEVLRPEHGEPRDTTAEVLKSLSSLVLMPKSLARTFAIGFVTS 120
           GN + YS+L++LCS VLKEVL+ EHGEP +T AEVLKSL SLVLM KS ARTFA+GFVTS
Sbjct: 212 GNAAVYSRLLSLCSHVLKEVLKSEHGEPSNTAAEVLKSLCSLVLMAKSQARTFALGFVTS 271

Query: 119 LARDSDEEVKKALVNFPRYLAMKAPDKAEPRALAVDSIM 3
           L    D +VKKALVNFPRYLA KAP+KAEPRALAV+SIM
Sbjct: 272 LGNQCD-DVKKALVNFPRYLAKKAPEKAEPRALAVESIM 309


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  165 bits (417), Expect = 8e-39
 Identities = 89/162 (54%), Positives = 114/162 (70%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 DVDDNPSDTQQQXXXXXXXXXXXXXXXVMFLIHLHRFPDSLKSLVQTISEVPLMALESCG 297
           +VDD     + +               V+ LIHL RFPDSLKSLVQT++E+P MALE CG
Sbjct: 164 EVDDGDGSEESEFDVRMLFSVLERLQLVLGLIHLDRFPDSLKSLVQTVAEIPAMALELCG 223

Query: 296 NTSNYSKLVNLCSRVLKEVLRPEHGEPRDTTAEVLKSLSSLVLMPKSLARTFAIGFVTS- 120
           NT+++ KL +LCSRVL EVL  EHG+   T AEVLKSLS L+L+ KS ARTFA+GF+ + 
Sbjct: 224 NTASFDKLTHLCSRVLTEVLSSEHGDQATTAAEVLKSLSPLILLAKSEARTFALGFMMNR 283

Query: 119 ---LARDSDEEVKKALVNFPRYLAMKAPDKAEPRALAVDSIM 3
              +A++ D  VKKA+VN PRYL  KAP+K+EPRALAV+S+M
Sbjct: 284 MMGMAKEFD-GVKKAIVNLPRYLLQKAPEKSEPRALAVESVM 324


>ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220407, partial [Cucumis
           sativus]
          Length = 500

 Score =  147 bits (370), Expect = 2e-33
 Identities = 77/134 (57%), Positives = 99/134 (73%), Gaps = 4/134 (2%)
 Frame = -2

Query: 392 MFLIHLHRFPDSLKSLVQTISEVPLMALESCGNTSNYSKLVNLCSRVLKEVLRPEHGEPR 213
           M +IHL RFPDSLKSL++T+ ++P++ALE C N S YSK  + CSR+L  +LRPE G+  
Sbjct: 191 MSVIHLDRFPDSLKSLIETVIDIPVLALEICTNLSIYSKFTDFCSRILSAMLRPEDGDLS 250

Query: 212 DTTAEVLKSLSSLVLMPKSLARTFAIGFVT----SLARDSDEEVKKALVNFPRYLAMKAP 45
           +T  EV+KSLS L+L  K  AR FA+ FVT     +A++SD  VK ALVN PRYL  KAP
Sbjct: 251 NTAVEVIKSLSPLILNHKDQARAFALEFVTIQIGKVAKESD-GVKSALVNLPRYLVQKAP 309

Query: 44  DKAEPRALAVDSIM 3
           +K+EPR+LAVDSIM
Sbjct: 310 EKSEPRSLAVDSIM 323


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  142 bits (359), Expect = 4e-32
 Identities = 74/121 (61%), Positives = 96/121 (79%), Gaps = 4/121 (3%)
 Frame = -2

Query: 353 KSLVQTISEVPLMALESCGNTSNYSKLVNLCSRVLKEVLRPEHGEPRDTTAEVLKSLSSL 174
           +SLVQT++E+P MALE CGNT+++ KL +LCSRVL EVL  EHG+   T AEVLKSLS L
Sbjct: 164 ESLVQTVAEIPAMALELCGNTASFDKLTHLCSRVLTEVLSSEHGDQATTAAEVLKSLSPL 223

Query: 173 VLMPKSLARTFAIGFVTS----LARDSDEEVKKALVNFPRYLAMKAPDKAEPRALAVDSI 6
           +L+ KS ARTFA+GF+ +    +A++ D  VKKA+VN PRYL  KAP+K+EPRALAV+S+
Sbjct: 224 ILLAKSEARTFALGFMMNRMMGMAKEFD-GVKKAIVNLPRYLLQKAPEKSEPRALAVESV 282

Query: 5   M 3
           M
Sbjct: 283 M 283


Top