BLASTX nr result

ID: Glycyrrhiza24_contig00011545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011545
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-53
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   210   1e-52
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   210   1e-52
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   209   2e-52
ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula] g...   207   9e-52

>ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|222864442|gb|EEF01573.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/137 (78%), Positives = 110/137 (80%)
 Frame = -3

Query: 412 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 233
           GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGD+AVYD+LVRMAQDFSLR
Sbjct: 115 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDALVRMAQDFSLR 174

Query: 232 CPLIQGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXDTVDFVPNFDNSQKEXXX 53
           CPLIQGHGNFGS+DADPPAAMRYTECR               DTVDFVPNFDNSQKE   
Sbjct: 175 CPLIQGHGNFGSVDADPPAAMRYTECRLDGLTEAVFLADLEQDTVDFVPNFDNSQKEPSL 234

Query: 52  XXXXXXXXXLNGSSGIA 2
                    LNGSSGIA
Sbjct: 235 FPTRLPTLLLNGSSGIA 251


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 925

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/137 (76%), Positives = 110/137 (80%)
 Frame = -3

Query: 412 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 233
           GLKPVHRRILFAMHELGLSS+KP+KKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 112 GLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 171

Query: 232 CPLIQGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXDTVDFVPNFDNSQKEXXX 53
           CPLIQGHGNFGS+DADPPAAMRYTECR               DTVDF+PNFDNSQKE   
Sbjct: 172 CPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSL 231

Query: 52  XXXXXXXXXLNGSSGIA 2
                    LNGSSGIA
Sbjct: 232 LPARLPTLLLNGSSGIA 248


>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 924

 Score =  210 bits (534), Expect = 1e-52
 Identities = 108/137 (78%), Positives = 109/137 (79%)
 Frame = -3

Query: 412 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 233
           GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 112 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 171

Query: 232 CPLIQGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXDTVDFVPNFDNSQKEXXX 53
            PLIQGHGNFGSIDADPPAAMRYTECR               DTVDFVPNFDNSQKE   
Sbjct: 172 SPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLTDLEQDTVDFVPNFDNSQKEPSL 231

Query: 52  XXXXXXXXXLNGSSGIA 2
                    LNGSSGIA
Sbjct: 232 LPARLPTLLLNGSSGIA 248


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 923

 Score =  209 bits (531), Expect = 2e-52
 Identities = 106/137 (77%), Positives = 109/137 (79%)
 Frame = -3

Query: 412 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 233
           GLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 180

Query: 232 CPLIQGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXDTVDFVPNFDNSQKEXXX 53
            PLIQGHGNFGSIDADPPAAMRYTECR               +TVDFVPNFDNSQKE   
Sbjct: 181 SPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL 240

Query: 52  XXXXXXXXXLNGSSGIA 2
                    LNGSSGIA
Sbjct: 241 LPARLPTLLLNGSSGIA 257


>ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula]
           gi|355478707|gb|AES59910.1| DNA gyrase subunit A
           [Medicago truncatula]
          Length = 992

 Score =  207 bits (526), Expect = 9e-52
 Identities = 105/137 (76%), Positives = 108/137 (78%)
 Frame = -3

Query: 412 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 233
           GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGD+AVYDS+VRMAQDFSLR
Sbjct: 116 GLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSMVRMAQDFSLR 175

Query: 232 CPLIQGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXDTVDFVPNFDNSQKEXXX 53
            PL+ GHGNFGSIDADPPAAMRYTECR               DTVDFVPNFDNSQKE   
Sbjct: 176 SPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAVMLADLDQDTVDFVPNFDNSQKEPSL 235

Query: 52  XXXXXXXXXLNGSSGIA 2
                    LNGSSGIA
Sbjct: 236 LPARLPTLLLNGSSGIA 252


Top