BLASTX nr result

ID: Glycyrrhiza24_contig00011501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011501
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   275   2e-71
gb|ACU23746.1| unknown [Glycine max]                                  275   2e-71
ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   273   5e-71
ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   273   5e-71
ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   273   5e-71

>ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 309

 Score =  275 bits (703), Expect = 2e-71
 Identities = 139/174 (79%), Positives = 140/174 (80%)
 Frame = +3

Query: 207 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 386
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 387 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRVLVTGLPSSAS 566
           YDFDGHRLRVEPA                                 E+RVLVTGLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSAS 123

Query: 567 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 728
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>gb|ACU23746.1| unknown [Glycine max]
          Length = 310

 Score =  275 bits (703), Expect = 2e-71
 Identities = 139/174 (79%), Positives = 140/174 (80%)
 Frame = +3

Query: 207 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 386
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 387 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRVLVTGLPSSAS 566
           YDFDGHRLRVEPA                                 E+RVLVTGLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSAS 123

Query: 567 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 728
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
           [Glycine max]
          Length = 326

 Score =  273 bits (699), Expect = 5e-71
 Identities = 138/174 (79%), Positives = 140/174 (80%)
 Frame = +3

Query: 207 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 386
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 387 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRVLVTGLPSSAS 566
           YDFDGHRLRVEPA                                 E+RVLV+GLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPSSAS 123

Query: 567 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 728
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 347

 Score =  273 bits (699), Expect = 5e-71
 Identities = 140/197 (71%), Positives = 143/197 (72%)
 Frame = +3

Query: 138 GNATDPQFPHXXXXXXXXXXXXXTVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRP 317
           GN TD  FP              TVYVGNLPGDIREREVEDLF+KYG ITHIDLKVPPRP
Sbjct: 11  GNTTDLNFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP 70

Query: 318 PGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXX 497
           PGYAFVEFED QDAEDAIRGRDGYDFDGHRLRVE A                        
Sbjct: 71  PGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAA----HGGRGNSSSRDRYSSHSNGR 126

Query: 498 XXXXXXXXXEFRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 677
                    E+RV+V GLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD
Sbjct: 127 GGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 186

Query: 678 MKYAIKKLDDSEFRNAF 728
           MKYAIKKLDDSEFRNAF
Sbjct: 187 MKYAIKKLDDSEFRNAF 203


>ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 329

 Score =  273 bits (699), Expect = 5e-71
 Identities = 140/197 (71%), Positives = 143/197 (72%)
 Frame = +3

Query: 138 GNATDPQFPHXXXXXXXXXXXXXTVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRP 317
           GN TD  FP              TVYVGNLPGDIREREVEDLF+KYG ITHIDLKVPPRP
Sbjct: 11  GNTTDLNFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP 70

Query: 318 PGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXX 497
           PGYAFVEFED QDAEDAIRGRDGYDFDGHRLRVE A                        
Sbjct: 71  PGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAA----HGGRGNSSSRDRYSSHSNGR 126

Query: 498 XXXXXXXXXEFRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 677
                    E+RV+V GLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD
Sbjct: 127 GGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 186

Query: 678 MKYAIKKLDDSEFRNAF 728
           MKYAIKKLDDSEFRNAF
Sbjct: 187 MKYAIKKLDDSEFRNAF 203


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