BLASTX nr result

ID: Glycyrrhiza24_contig00011497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011497
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551943.1| PREDICTED: probable pectate lyase 5-like [Gl...    80   1e-13
ref|XP_003538582.1| PREDICTED: probable pectate lyase 5-like, pa...    80   1e-13
ref|XP_002314576.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003601871.1| Pectate lyase [Medicago truncatula] gi|35549...    79   5e-13
ref|XP_003552799.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...    76   3e-12

>ref|XP_003551943.1| PREDICTED: probable pectate lyase 5-like [Glycine max]
          Length = 405

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +2

Query: 137 SALQDPELVVEQVQKSINASRRNLAFLSCGSGNPIDDCWR 256
           S LQDPELVVE VQKSINASRRNLAFLSCG+GNPIDDCWR
Sbjct: 26  SPLQDPELVVEDVQKSINASRRNLAFLSCGTGNPIDDCWR 65


>ref|XP_003538582.1| PREDICTED: probable pectate lyase 5-like, partial [Glycine max]
          Length = 398

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +2

Query: 137 SALQDPELVVEQVQKSINASRRNLAFLSCGSGNPIDDCWR 256
           S LQDPELVVE VQKSINASRRNLAFLSCG+GNPIDDCWR
Sbjct: 19  SPLQDPELVVEDVQKSINASRRNLAFLSCGTGNPIDDCWR 58


>ref|XP_002314576.1| predicted protein [Populus trichocarpa] gi|222863616|gb|EEF00747.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/45 (84%), Positives = 41/45 (91%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 SFISAL--QDPELVVEQVQKSINASRRNLAFLSCGSGNPIDDCWR 256
           SFIS L  QDPELVVE+V +SINASRRNLAFLSCG+GNPIDDCWR
Sbjct: 17  SFISCLPVQDPELVVEEVHRSINASRRNLAFLSCGTGNPIDDCWR 61


>ref|XP_003601871.1| Pectate lyase [Medicago truncatula] gi|355490919|gb|AES72122.1|
           Pectate lyase [Medicago truncatula]
          Length = 403

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/45 (86%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 SFI--SALQDPELVVEQVQKSINASRRNLAFLSCGSGNPIDDCWR 256
           SFI  S LQDPELVV+ VQKSIN SRRNLAFLSCGSGNPIDDCWR
Sbjct: 19  SFIQSSPLQDPELVVQDVQKSINDSRRNLAFLSCGSGNPIDDCWR 63


>ref|XP_003552799.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 5-like
           [Glycine max]
          Length = 425

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +2

Query: 65  VVQAVMAXXXXXXXXXXXXXXSFI--SALQDPELVVEQVQKSINASRRNLAFLSCGSGNP 238
           VVQ +MA              S I  S +QDPELV+++VQKSIN SRRNL +LSCG+GNP
Sbjct: 18  VVQEIMAFSFTFMFQFLLLAPSVIYASPVQDPELVIQEVQKSINGSRRNLGYLSCGTGNP 77

Query: 239 IDDCWR 256
           IDDCWR
Sbjct: 78  IDDCWR 83


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