BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011469
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   367   4e-99
gb|AFK47538.1| unknown [Medicago truncatula]                          363   5e-98
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   346   5e-93
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   345   1e-92
ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|2...   340   3e-91

>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score =  367 bits (941), Expect = 4e-99
 Identities = 192/242 (79%), Positives = 197/242 (81%), Gaps = 3/242 (1%)
 Frame = -3

Query: 990 GEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHP 811
           G GGA QPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT NNEQLRMRSVHP
Sbjct: 12  GGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHP 71

Query: 810 LDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNV 631
           LD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGSIYQAPQLCNV
Sbjct: 72  LDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNV 131

Query: 630 FAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPKVGKEAIDVKEVKRVDH 460
           FAARIGRALYYIQKAFTTAASKLEKIGY    DSENETALLE K  KE ID+KEVKRVDH
Sbjct: 132 FAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKEVKRVDH 191

Query: 459 ILASLQRKLXXXXXXXXXXXXXXXXPTAEIXXXXXXXXXXXXXXAPAVDPIIDQGPAKRM 280
           ILASLQRKL                PTAE               AP  DPIIDQGPAKRM
Sbjct: 192 ILASLQRKLPPAPPPPPFPEGYVPPPTAE-TEKGTETQEAAETQAPTADPIIDQGPAKRM 250

Query: 279 KF 274
           KF
Sbjct: 251 KF 252


>gb|AFK47538.1| unknown [Medicago truncatula]
          Length = 248

 Score =  363 bits (931), Expect = 5e-98
 Identities = 189/249 (75%), Positives = 199/249 (79%), Gaps = 3/249 (1%)
 Frame = -3

Query: 1011 MATPGPGGEGGAV---QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 841
            MATPG G   G V   QPPGTDMTGICFRDQLWLNTYPLDR+LVFDYFALSPFYDWTSNN
Sbjct: 1    MATPGMGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRDLVFDYFALSPFYDWTSNN 60

Query: 840  EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 661
            EQLRMRS HPLD SQL+KM G EYVLSEVMEPHLF+++KQKRDSPDKVTPMLAYYILDGS
Sbjct: 61   EQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGS 120

Query: 660  IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVK 481
            IYQAPQL NVFAARIGRALYYI+KAFTTAASKLEKIGYVDSENET + EPKV KE ID+K
Sbjct: 121  IYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLK 180

Query: 480  EVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPTAEIXXXXXXXXXXXXXXAPAVDPIID 301
            E+KRVDHILASLQRKL                 TAE               AP VDPI+D
Sbjct: 181  EIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAE-TEKGPETQEAAESLAPTVDPILD 239

Query: 300  QGPAKRMKF 274
            QGPAKRMKF
Sbjct: 240  QGPAKRMKF 248


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  346 bits (888), Expect = 5e-93
 Identities = 181/254 (71%), Positives = 191/254 (75%), Gaps = 8/254 (3%)
 Frame = -3

Query: 1011 MATPGP--------GGEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 856
            MA P P        G    A  PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 1    MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 855  WTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYY 676
            WT NNEQLR+RS+HPLD S LSKMTGTEY+L+EVMEPHLFVIRKQKRD P+KVTPML YY
Sbjct: 61   WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYY 120

Query: 675  ILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKE 496
            ILDGSIYQAPQLCNVF ARIGRALY+I KAFTTAASKLEKIGYVD+ENE   LE KVGKE
Sbjct: 121  ILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKE 180

Query: 495  AIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPTAEIXXXXXXXXXXXXXXAPAV 316
             ID KEV RVD ILASLQRKL                PTAE                PA+
Sbjct: 181  TIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAE-GEKGPETQQAAEPQLPAL 239

Query: 315  DPIIDQGPAKRMKF 274
            DPIIDQGP+KRMKF
Sbjct: 240  DPIIDQGPSKRMKF 253


>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
            subunit 6 [Vitis vinifera]
          Length = 258

 Score =  345 bits (884), Expect = 1e-92
 Identities = 180/254 (70%), Positives = 190/254 (74%), Gaps = 8/254 (3%)
 Frame = -3

Query: 1011 MATPGP--------GGEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 856
            MA P P        G       PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 6    MAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 65

Query: 855  WTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYY 676
            WT NNEQLR+RS+HPLD S LSKMTGTEY+L+EVMEPHLFVIRKQKRD P+KVTPML YY
Sbjct: 66   WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYY 125

Query: 675  ILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKE 496
            ILDGSIYQAPQLCNVF ARIGRALY+I KAFTTAASKLEKIGYVD+ENE   LE KVGKE
Sbjct: 126  ILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKE 185

Query: 495  AIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPTAEIXXXXXXXXXXXXXXAPAV 316
             ID KEV RVD ILASLQRKL                PTAE                PA+
Sbjct: 186  TIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAE-GEKGPETQQAAEPQLPAL 244

Query: 315  DPIIDQGPAKRMKF 274
            DPIIDQGP+KRMKF
Sbjct: 245  DPIIDQGPSKRMKF 258


>ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|222874599|gb|EEF11730.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  340 bits (873), Expect = 3e-91
 Identities = 174/233 (74%), Positives = 183/233 (78%)
 Frame = -3

Query: 972 QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHPLDPSQL 793
           QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWT NNEQLR +S+HPLD S L
Sbjct: 4   QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHL 63

Query: 792 SKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNVFAARIG 613
            KMTGTEY+LSEVMEPHLFV RKQKRDS +KVTPML YY+LDGSIYQAPQLC+VFAAR+G
Sbjct: 64  LKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVG 123

Query: 612 RALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVKEVKRVDHILASLQRKL 433
           RALYYI KAF TAASKLEKIGYVDSENE A  E K GKE ID KEVKR+DHILASLQRKL
Sbjct: 124 RALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKL 183

Query: 432 XXXXXXXXXXXXXXXXPTAEIXXXXXXXXXXXXXXAPAVDPIIDQGPAKRMKF 274
                           PT E                P+VDPIIDQGPAKRMKF
Sbjct: 184 PPAPPPPSFPEGYVPQPTTE-EEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235