BLASTX nr result

ID: Glycyrrhiza24_contig00011422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011422
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   169   3e-40
ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   164   5e-39
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   160   1e-37
emb|CBI25550.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat...   117   7e-25

>ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355510509|gb|AES91651.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 671

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/90 (88%), Positives = 83/90 (92%), Gaps = 1/90 (1%)
 Frame = +2

Query: 236 MSSKINGQISPQPCPHLAEFHRTSTKPFLSLHNCLRIKPPGGRASLRRDPHEVPRCAACG 415
           MSSKINGQISPQPCPHLAEF RTSTKPFLSLHNCLRIKPPGGRASLRRDPHE+P C ACG
Sbjct: 1   MSSKINGQISPQPCPHLAEFRRTSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACG 60

Query: 416 LSSPSRLYACIACAAVSCHSS-AGSPSHAA 502
           LS+PSRLYACI+CAAVSCHSS  G  SHAA
Sbjct: 61  LSAPSRLYACISCAAVSCHSSTVGVISHAA 90


>ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 594

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/90 (86%), Positives = 82/90 (91%), Gaps = 1/90 (1%)
 Frame = +2

Query: 236 MSSKINGQISPQPCPHLAEFHRTSTKPFLSLHNCLRIKPPGGRASLRRDPHEVPRCAACG 415
           MSSKINGQISP PCPHLAEFHRTS KPFL+LHNCLRIKPPGGRASLRR+P EVPRC ACG
Sbjct: 1   MSSKINGQISPLPCPHLAEFHRTSAKPFLALHNCLRIKPPGGRASLRRNPDEVPRCCACG 60

Query: 416 LSSPSRLYACIACAAVSCHSS-AGSPSHAA 502
           LS+PSRLYAC+ CAAVSCHSS AG  SHAA
Sbjct: 61  LSAPSRLYACVTCAAVSCHSSAAGVLSHAA 90


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  160 bits (405), Expect = 1e-37
 Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +2

Query: 236 MSSKINGQISPQPCPHLAEFHRTSTKPFLSLHNCLRIKPPGGRASLRRDPHEVPRCAACG 415
           MSSKINGQISPQPCPHLAEF RTS KPFL+LHNCLRIKPPGGRA+LRRDP EVPRC +CG
Sbjct: 1   MSSKINGQISPQPCPHLAEFRRTSAKPFLALHNCLRIKPPGGRAALRRDPDEVPRCCSCG 60

Query: 416 LSSPSRLYACIACAAVSCHSSAG-SPSHAA 502
           LS+PSRLYAC+ CAA+ CHSS G   SHAA
Sbjct: 61  LSAPSRLYACVTCAAIFCHSSTGVGLSHAA 90


>emb|CBI25550.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  120 bits (301), Expect = 1e-25
 Identities = 65/98 (66%), Positives = 75/98 (76%), Gaps = 7/98 (7%)
 Frame = +2

Query: 230 TAMSSKIN-----GQISPQPCPHLAEFH-RTSTKPFLSLHNCLRIKPPGGRASLRRDPHE 391
           T MSSKIN     GQI PQPCPHLAE+  R  +KPF +L  CLR+KP G RA++RRDP E
Sbjct: 18  TPMSSKINHHRINGQI-PQPCPHLAEYRTRNGSKPFRALQECLRVKPLG-RAAIRRDPSE 75

Query: 392 VPRCAACGLSSPSRLYACIACAAVSCHSS-AGSPSHAA 502
           VPRC ACG ++ SRLYAC+ CAAVSCHSS + SPSHAA
Sbjct: 76  VPRCGACGEAARSRLYACVTCAAVSCHSSDSPSPSHAA 113


>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +2

Query: 272 PCPHLAEFH-RTSTKPFLSLHNCLRIKPPGGRASLRRDPHEVPRCAACGLSSPSRLYACI 448
           PCPHLAEFH R  +KPF  L +CLRIKPPGGRA++RR+P EVPRC ACG SS  RLYAC+
Sbjct: 12  PCPHLAEFHSRNGSKPFRFLQDCLRIKPPGGRAAIRREPSEVPRCGACGESSRPRLYACV 71

Query: 449 ACAAVSCHSSAGSPSHAA 502
            CA +SCH+  G PSHAA
Sbjct: 72  TCATISCHAPPG-PSHAA 88


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