BLASTX nr result

ID: Glycyrrhiza24_contig00011400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011400
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH28880.1| WD40 repeats protein LjTTG1 [Lotus japonicus]         154   9e-36
gb|ABQ18246.1| transcription factor WD-repeat protein 1 [Caragan...   154   9e-36
ref|XP_003602392.1| Protein TRANSPARENT TESTA GLABRA [Medicago t...   152   2e-35
gb|ADQ27315.1| truncated A2 protein [Pisum sativum]                   149   2e-34
gb|ADQ27313.1| truncated A2 protein [Pisum sativum]                   149   2e-34

>dbj|BAH28880.1| WD40 repeats protein LjTTG1 [Lotus japonicus]
          Length = 349

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 7/91 (7%)
 Frame = -2

Query: 254 MDNSTQESHLRSENSVTYESPYPLYAMAFSPNSHSHS-------QRVAVGSFIEEYTNRI 96
           MDNSTQ+SHLRSENSVTY+SPYPLYAMAFSPN++++S       QR+AVGSF+EEYTNR+
Sbjct: 1   MDNSTQDSHLRSENSVTYDSPYPLYAMAFSPNNNNNSHSAATTTQRLAVGSFLEEYTNRV 60

Query: 95  DILSFNPDTLSIRPQPSLSFDHPYPPTKLMF 3
           DILSFNPDT SIRPQPSLSFDHPYPPTKLMF
Sbjct: 61  DILSFNPDTPSIRPQPSLSFDHPYPPTKLMF 91


>gb|ABQ18246.1| transcription factor WD-repeat protein 1 [Caragana jubata]
          Length = 337

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = -2

Query: 254 MDNSTQESHLRSENSVTYESPYPLYAMAFSPNSHSHSQRVAVGSFIEEYTNRIDILSFNP 75
           MDNSTQESHLRSENSVTY+SPYPLYAM+FSPNS    QR+AVGSFIEEYTNR+DILSFNP
Sbjct: 1   MDNSTQESHLRSENSVTYDSPYPLYAMSFSPNS----QRIAVGSFIEEYTNRVDILSFNP 56

Query: 74  DTLSIRPQPSLSFDHPYPPTKLMF 3
           +TLSI+PQPSLSFDHPYPPTK+MF
Sbjct: 57  ETLSIKPQPSLSFDHPYPPTKVMF 80


>ref|XP_003602392.1| Protein TRANSPARENT TESTA GLABRA [Medicago truncatula]
           gi|158024528|gb|ABW08112.1| WD40-1 protein [Medicago
           truncatula] gi|355491440|gb|AES72643.1| Protein
           TRANSPARENT TESTA GLABRA [Medicago truncatula]
          Length = 342

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/85 (84%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
 Frame = -2

Query: 254 MDNSTQESHLRSEN-SVTYESPYPLYAMAFSPNSHSHSQRVAVGSFIEEYTNRIDILSFN 78
           MDNSTQESHLRS+N SVTY+SPYPLYAM+ SPN++S  QR+AVGSFIEEYTNRIDIL+FN
Sbjct: 1   MDNSTQESHLRSDNNSVTYDSPYPLYAMSISPNTNSPQQRIAVGSFIEEYTNRIDILNFN 60

Query: 77  PDTLSIRPQPSLSFDHPYPPTKLMF 3
           PDTLS++PQPSLSFDHPYPPTKLMF
Sbjct: 61  PDTLSLKPQPSLSFDHPYPPTKLMF 85


>gb|ADQ27315.1| truncated A2 protein [Pisum sativum]
          Length = 213

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/86 (84%), Positives = 80/86 (93%), Gaps = 2/86 (2%)
 Frame = -2

Query: 254 MDNSTQESHLRSEN-SVTYESPYPLYAMAFSPNSH-SHSQRVAVGSFIEEYTNRIDILSF 81
           MDNSTQESHLRS+N SVTY+SP+PLYAMAFS N +  H QR+AVGSFIEEYTNR+DILSF
Sbjct: 1   MDNSTQESHLRSDNNSVTYDSPHPLYAMAFSSNPNPQHHQRIAVGSFIEEYTNRVDILSF 60

Query: 80  NPDTLSIRPQPSLSFDHPYPPTKLMF 3
           NPDTLSI+PQPSLSFDHPYPPTKLMF
Sbjct: 61  NPDTLSIKPQPSLSFDHPYPPTKLMF 86


>gb|ADQ27313.1| truncated A2 protein [Pisum sativum]
          Length = 111

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/86 (84%), Positives = 80/86 (93%), Gaps = 2/86 (2%)
 Frame = -2

Query: 254 MDNSTQESHLRSEN-SVTYESPYPLYAMAFSPNSH-SHSQRVAVGSFIEEYTNRIDILSF 81
           MDNSTQESHLRS+N SVTY+SP+PLYAMAFS N +  H QR+AVGSFIEEYTNR+DILSF
Sbjct: 1   MDNSTQESHLRSDNNSVTYDSPHPLYAMAFSSNPNPQHHQRIAVGSFIEEYTNRVDILSF 60

Query: 80  NPDTLSIRPQPSLSFDHPYPPTKLMF 3
           NPDTLSI+PQPSLSFDHPYPPTKLMF
Sbjct: 61  NPDTLSIKPQPSLSFDHPYPPTKLMF 86


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