BLASTX nr result

ID: Glycyrrhiza24_contig00011383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011383
         (2122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612864.1| RNA-binding protein [Medicago truncatula] gi...   538   e-150
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...   524   e-146
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...   514   e-143
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105
ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...   387   e-105

>ref|XP_003612864.1| RNA-binding protein [Medicago truncatula] gi|355514199|gb|AES95822.1|
            RNA-binding protein [Medicago truncatula]
          Length = 518

 Score =  538 bits (1385), Expect = e-150
 Identities = 310/521 (59%), Positives = 347/521 (66%), Gaps = 16/521 (3%)
 Frame = +2

Query: 191  DAVSAPSSIFDKLFGDAPS-------TASLFSDDNPYRRKPQQPPPVSDATNHTPSPSNG 349
            D VSAPSSIF+ LF +AP        T SLFSDDNPY+RKP          N T SP NG
Sbjct: 16   DTVSAPSSIFNTLFANAPEQTTAAADTVSLFSDDNPYKRKP----------NQTLSPENG 65

Query: 350  VVXXXXXXXXXXXTPKLDSDSATE-DEASEKKLKH----GSDEREGKVVNLGGDAVGNSX 514
            VV           +P +DS+   E  E  EKK K     G +E + K VNL G+ VG+  
Sbjct: 66   VVDEKKRKKNKEKSPVIDSNPIIEVSEKKEKKKKKKSGSGEEEEKEKEVNLDGEGVGDKK 125

Query: 515  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRKERENPADMLVSKEGF 694
                                                     NKRK R+NPADM+V+KEGF
Sbjct: 126  KKKRKRDEVEKEWEEKKYGIVEGGDKDESVEKVG-------NKRKVRDNPADMMVTKEGF 178

Query: 695  DDEDKLLRTIFVGNXXXXXXXXXXXXXXXXFGEVESVRIRSVPLQETKKPRKGAILSKKI 874
            DDEDKLLRTIFVGN                FGEVESVRIRSVPLQ+TKKPRKGAIL+KKI
Sbjct: 179  DDEDKLLRTIFVGNLPVKVKKKTLLKEFKVFGEVESVRIRSVPLQDTKKPRKGAILAKKI 238

Query: 875  DESADSVHAYIVFKTEESAQASLSHNMTVVEGNHIRVDRACPPRKKLRGESTPLYDNKRT 1054
             E+A+SV+AYIVFKTEESAQASLSHNMTVV+GNHIRVDRACPPRKKL+G+S PLYDNKRT
Sbjct: 239  SETAESVNAYIVFKTEESAQASLSHNMTVVDGNHIRVDRACPPRKKLKGDSAPLYDNKRT 298

Query: 1055 VFVGNLPFDVKDEELYQLFCGMSNLESSIEAVRVVRDQHLNVGKGIAYVLFKTREAAYSV 1234
            VFVGNLPFDVKDEELYQLFCG+ +LESSIEA+RVVRD HLNVGKGIAY LFKTR+AA SV
Sbjct: 299  VFVGNLPFDVKDEELYQLFCGIPSLESSIEAIRVVRDPHLNVGKGIAYALFKTRDAALSV 358

Query: 1235 VKKRNLKLRDRELRLSHAKAD-AATPSKRPYS--SRPSHAKADTATPSKRPYSSSAQAYS 1405
            V+KR+L LRDRELR+S AKAD +ATPSKRPYS  +RPSH K D ATPSK+PYS + Q  S
Sbjct: 359  VRKRSLMLRDRELRVSIAKADPSATPSKRPYSPAARPSHGKPD-ATPSKKPYSQATQGRS 417

Query: 1406 TPA-KFXXXXXXXXXXXXXXXXXXXXXYQGLRATKSDVHKKTHGGEKRKERMTKRPSVAA 1582
            TP  KF                     YQGLRATKSDV KK+H GEK KER  KRP+VAA
Sbjct: 418  TPVKKFSGASKSPSSSKNGSNRKTTASYQGLRATKSDVPKKSHSGEKPKERTKKRPTVAA 477

Query: 1583 RKAKVKMHKEGGAPKQAGSKRKLDSRTPDAPLRNKKAKKNK 1705
            RKAK  M KEG  PKQAGSKRK DSRTPD+  R  K +K +
Sbjct: 478  RKAKANMQKEGDTPKQAGSKRKFDSRTPDSSRRVMKVQKKR 518


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score =  524 bits (1349), Expect = e-146
 Identities = 312/528 (59%), Positives = 347/528 (65%), Gaps = 23/528 (4%)
 Frame = +2

Query: 191  DAVSAPSSIFDKLFGDAP------STASLFSDDNPYRRKPQQPPPVSDATNHTPSPSNG- 349
            D VS PSSIF KLF  AP      + ASLFSDDNP+RRKP    P+SD+TN T +P++G 
Sbjct: 16   DTVSTPSSIFSKLFAIAPERTTATTAASLFSDDNPFRRKPT---PLSDSTNRTQNPNDGD 72

Query: 350  ---------VVXXXXXXXXXXXTPKLDSDSATE----DEASEKKLKHGSDEREGKVVNLG 490
                                  TP    D+        + SEKK K  SDE  GK + +G
Sbjct: 73   HPVNTDSGEEKKRKRNKEKTDKTPAPAIDTVVSVIEASDKSEKKRKRDSDE--GKDLIVG 130

Query: 491  GDAVGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRKERENPAD 670
             +A G                                             KRK  ++PAD
Sbjct: 131  AEASGKRKRKRGEVEKDWEEKKYGIVEEGLENKTVGI-------------KRKTLDDPAD 177

Query: 671  MLVSKEGFDDEDKLLRTIFVGNXXXXXXXXXXXXXXXXFGEVESVRIRSVPLQETKKPRK 850
            M+VSKEGFDDEDKLLRT+FVGN                FGEVESVRIRSVP+Q+TKKPRK
Sbjct: 178  MMVSKEGFDDEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRK 237

Query: 851  GAILSKKIDESADSVHAYIVFKTEESAQASLSHNMTVVEGNHIRVDRACPPRKKLRGEST 1030
            GAIL+KKI+++ADSVHAYIVFKTE+SAQASLSHNM++VEGNHIRVDRACPPRKK +GEST
Sbjct: 238  GAILAKKINDAADSVHAYIVFKTEQSAQASLSHNMSLVEGNHIRVDRACPPRKKHKGEST 297

Query: 1031 PLYDNKRTVFVGNLPFDVKDEELYQLFCGMSNLESSIEAVRVVRDQHLNVGKGIAYVLFK 1210
            PLYD+KRTVFVGNLPFDVKDEELYQLFCG+SNLESSIEAVRVVRD HLNVGKGIAYVLFK
Sbjct: 298  PLYDDKRTVFVGNLPFDVKDEELYQLFCGISNLESSIEAVRVVRDPHLNVGKGIAYVLFK 357

Query: 1211 TREAAYSVVKKRNLKLRDRELRLSHAKADAATPSKRPYSSRPSHAKADTATPSKRPYSSS 1390
            T+EAA  VVKKRNLKLRDRELRLSHAK D ATPSKRP    PS A A  +TP+KRPY   
Sbjct: 358  TKEAAKFVVKKRNLKLRDRELRLSHAKVD-ATPSKRP---NPSSAHA-PSTPAKRPY-PL 411

Query: 1391 AQAYSTPAK---FXXXXXXXXXXXXXXXXXXXXXYQGLRATKSDVHKKTHGGEKRKERMT 1561
            A A STPAK                         YQGLRATKSDVHKK  GGEK KERMT
Sbjct: 412  AHAPSTPAKEFSVASRSPSSSNNMSKSNRKTNASYQGLRATKSDVHKKIQGGEKPKERMT 471

Query: 1562 KRPSVAARKAKVKMHKEGGAPKQAGSKRKLDSRTPDAPLRNKKAKKNK 1705
            KRPSVAARKAK K+ KE   PKQAG KRKLDSRTPD+ LRN+K KKN+
Sbjct: 472  KRPSVAARKAKAKLGKESDLPKQAGMKRKLDSRTPDSTLRNRKVKKNR 519


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score =  514 bits (1325), Expect = e-143
 Identities = 305/524 (58%), Positives = 347/524 (66%), Gaps = 19/524 (3%)
 Frame = +2

Query: 191  DAVSAPSSIFDKLFGDAP------STASLFSDDNPYRRKPQQPPPVSDATNHTPSPSNG- 349
            DAVS PSSIF KLF +AP      + ASLFSDDNP+RRK     P+S +TN T +P+NG 
Sbjct: 16   DAVSTPSSIFSKLFANAPEQTTATAAASLFSDDNPFRRKSA---PLSYSTNRTQNPNNGD 72

Query: 350  --------VVXXXXXXXXXXXTPKLDSDSATED-EASEKKLKHGSDEREGKVVNLGGDAV 502
                                  P  D+ S  E  E   KK K  SDE  GK +++G +A+
Sbjct: 73   HPVNTDSSEEKKRKRTKDKTSAPAPDTVSVIEPLEEPGKKRKRDSDE--GKDLSVGAEAI 130

Query: 503  GNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRKERENPADMLVS 682
            G                                             KRK  ++PADM+VS
Sbjct: 131  GKRKRKRDEVEKEWEEKKYGAVEEGIENKTVGI-------------KRKTLDDPADMMVS 177

Query: 683  KEGFDDEDKLLRTIFVGNXXXXXXXXXXXXXXXXFGEVESVRIRSVPLQETKKPRKGAIL 862
            KEGFD+EDKLLRT+FVGN                FGEVESVRIRSVP+Q+TKKPRKGAIL
Sbjct: 178  KEGFDNEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAIL 237

Query: 863  SKKIDESADSVHAYIVFKTEESAQASLSHNMTVVEGNHIRVDRACPPRKKLRGESTPLYD 1042
            +KKI+++ADSVHAYIVFKTE+SAQASL+HNM++VEGNHIRVDRACPPRKK +GESTPLYD
Sbjct: 238  AKKINDAADSVHAYIVFKTEQSAQASLAHNMSLVEGNHIRVDRACPPRKKHKGESTPLYD 297

Query: 1043 NKRTVFVGNLPFDVKDEELYQLFCGMSNLESSIEAVRVVRDQHLNVGKGIAYVLFKTREA 1222
            NKRTVFVGNLPFDVKDEELY+LFCG+SNLESSIEA+RVVRD HLNVGKGIAYVLFKT+EA
Sbjct: 298  NKRTVFVGNLPFDVKDEELYKLFCGISNLESSIEAIRVVRDPHLNVGKGIAYVLFKTKEA 357

Query: 1223 AYSVVKKRNLKLRDRELRLSHAKADAATPSKRPYSSRPSHAKADTATPSKRPYSSSAQAY 1402
            A  VVKKRNLKLRDRELRL HAKAD ATPSKRP    PS A A  +TP+KRP + SA A 
Sbjct: 358  AKFVVKKRNLKLRDRELRLCHAKAD-ATPSKRP---NPSSAHA-PSTPAKRP-NPSAHAP 411

Query: 1403 STPAK---FXXXXXXXXXXXXXXXXXXXXXYQGLRATKSDVHKKTHGGEKRKERMTKRPS 1573
            STPAK                         YQGLRATKSDVHKK  GGEK KER TKRPS
Sbjct: 412  STPAKKFSVASRSPSSSNNMSKSNRKTNTSYQGLRATKSDVHKKIQGGEKPKERKTKRPS 471

Query: 1574 VAARKAKVKMHKEGGAPKQAGSKRKLDSRTPDAPLRNKKAKKNK 1705
            VAARKAK  + K+   PKQAG KRK+DSRTPD+ LRN+K KKN+
Sbjct: 472  VAARKAKANLVKQSDLPKQAGMKRKVDSRTPDSTLRNRKVKKNR 515


>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|222833855|gb|EEE72332.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score =  388 bits (996), Expect = e-105
 Identities = 250/524 (47%), Positives = 294/524 (56%), Gaps = 24/524 (4%)
 Frame = +2

Query: 200  SAPSSIFDKLFGDAP---STASLFSDDNPYRRKPQQPP----PVSDATNHTPSPSNGVVX 358
            SA S +F  LF  A    ST+SLFSD NP++RKP+ P     P +D     P   N    
Sbjct: 20   SALSDVFQTLFSGADQTASTSSLFSDSNPFKRKPEDPKSNENPSTDVDTQKP---NFYET 76

Query: 359  XXXXXXXXXXTPKLDSDSATEDEA-SEKKLKHGSDEREGKVVNLGGDAVGNSXXXXXXXX 535
                       P L  +   E+     KK K    ERE +    G   V N         
Sbjct: 77   TEKLKKVKTENPNLGFEPKEEETLRGRKKRKRDDLEREYEAKKYG-PVVDNEENASVVVG 135

Query: 536  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRKERENPADMLVSKE--GFDDEDK 709
                                               KRK  ++ AD+LVSKE  GFDDE K
Sbjct: 136  A----------------------------------KRKNTDDAADVLVSKESEGFDDESK 161

Query: 710  LLRTIFVGNXXXXXXXXXXXXXXXXFGEVESVRIRSVPLQETKKPRKGAILSKKIDESAD 889
            LLRT+FVGN                FG+VESVRIRSVP+ E+K PRKGAIL KK +++ D
Sbjct: 162  LLRTVFVGNLPLKVKKKTLIKEFSKFGDVESVRIRSVPIAESKIPRKGAILLKKFNDNVD 221

Query: 890  SVHAYIVFKTEESAQASLSHNMTVVEGNHIRVDRACPPRKKLRGESTPLYDNKRTVFVGN 1069
            SVHAY+VFK E+SA+ASLSHNM VV GNHIRVDRACPPRKKL+G   PLYDNKRTVFVGN
Sbjct: 222  SVHAYVVFKNEQSAEASLSHNMAVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGN 281

Query: 1070 LPFDVKDEELYQLFCGMSNLESSIEAVRVVRDQHLNVGKGIAYVLFKTREAAYSVVKKRN 1249
            LPFDVKDEELYQLF G+ +L SSIEAVRV+RD H+ +GKGIAYVLFKTREAA  V+KKRN
Sbjct: 282  LPFDVKDEELYQLFTGIKDLASSIEAVRVIRDPHVGLGKGIAYVLFKTREAANLVIKKRN 341

Query: 1250 LKLRDRELRLSHAKADAATPSKRPYSSRPSHAKADTATPSKRPYSSSAQAYSTPAKFXXX 1429
            LKLRDRELRLSHA+ D +TPSKR    + S A+    +P+KR    S   Y         
Sbjct: 342  LKLRDRELRLSHARQD-STPSKR----KNSFAEETANSPNKRLAPDSRAPYHN------- 389

Query: 1430 XXXXXXXXXXXXXXXXXXYQGLRATKSDVHKKTHG-------------GEKRKER-MTKR 1567
                              YQGLRA+KS V KK H               + R+E+   KR
Sbjct: 390  --------NRPDRKAAKSYQGLRASKSGVEKKVHAPAHSKRDVAPKMKSKPREEKHQGKR 441

Query: 1568 PSVAARKAKVKMHKEGGAPKQAGSKRKLDSRTPDAPLRNKKAKK 1699
            P+VA RKAK    K+GGA + A  KRKLDSRTPD+  R KKA+K
Sbjct: 442  PAVAKRKAKATALKDGGALEPARQKRKLDSRTPDSSNRKKKARK 485


>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score =  387 bits (993), Expect = e-105
 Identities = 251/544 (46%), Positives = 304/544 (55%), Gaps = 49/544 (9%)
 Frame = +2

Query: 215  IFDKLFGDAP----STASLFSDDNPYRRKPQ--------QPPPVSDA-------TNHTPS 337
            +F  LFG  P    S+ SLFSD NP+RRKP         + P + D+       T  T  
Sbjct: 14   VFKTLFGYLPKDDASSRSLFSDSNPFRRKPSLSSQTLPFENPSIPDSEVKKRKRTEETDE 73

Query: 338  PSNGV---------VXXXXXXXXXXXTPKLDSDSATEDEASEKKLKHGSDEREGKVVNLG 490
             S  +         V            P L S+S  E   S  +      + +GK + LG
Sbjct: 74   TSQTLEDAPKAQHLVEPKKSKNDKLRNPNLGSESNEELLNSVSESNKTLKKNKGKYIILG 133

Query: 491  GDAVGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---KRKEREN 661
             +   NS                                              KRK   N
Sbjct: 134  SEGNPNSGSEVKEMVDSEKGKEKKKKKRKRDEIEEEYEAQHYGTVAKVEGVGEKRKSVVN 193

Query: 662  PADMLVSKEGFDDEDKLLRTIFVGNXXXXXXXXXXXXXXXXFGEVESVRIRSVPLQETKK 841
            PA+MLVSKEGFDDE KLLRT+FVGN                FGEV+SVRIRSVP+ ++KK
Sbjct: 194  PAEMLVSKEGFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKK 253

Query: 842  PRKGAILSKKIDESADSVHAYIVFKTEESAQASLSHNMTVVEGNHIRVDRACPPRKKLRG 1021
            PRKGAI+SKKI++S DSVHAYIVFKTEESAQ SLSHNM+V+ GNHIRVDRACPPRKKL+G
Sbjct: 254  PRKGAIISKKINDSVDSVHAYIVFKTEESAQTSLSHNMSVIGGNHIRVDRACPPRKKLKG 313

Query: 1022 ES-TPLYDNKRTVFVGNLPFDVKDEELYQLFCGMSNLESSIEAVRVVRDQHLNVGKGIAY 1198
            E+   LYDNKRTVFVGNLPFDVK EE+YQLFCG+ +LESSIEAVRVVR+ H +VGKGIAY
Sbjct: 314  ENDASLYDNKRTVFVGNLPFDVKAEEIYQLFCGIDSLESSIEAVRVVRNPHTSVGKGIAY 373

Query: 1199 VLFKTREAAYSVVKKRNLKLRDRELRLSHAKADAATPSKRPYSSRPSHAKADTATPSKRP 1378
            +LFKT++AA  VVKKRNLKLRDR+LRL HAK  + TPSKR     P+ A+AD  +P+K+ 
Sbjct: 374  ILFKTKDAANLVVKKRNLKLRDRDLRLYHAKPSSTTPSKR---RNPTPAEAD-ISPAKKL 429

Query: 1379 YSSSAQAYSTPAKFXXXXXXXXXXXXXXXXXXXXXYQGLRATKSDVHKKTHGGEKR---- 1546
             S S  +  +  +                      YQGL+A+KS V KK     K     
Sbjct: 430  ASGSRISLESSNRL--------------KTKSVISYQGLQASKSGVPKKGRLQTKEAVKF 475

Query: 1547 ----------KERMTKRPSVAARKAKVKMHKE---GGAPKQAGSKRKLDSRTPDAPLRNK 1687
                      KE+  KRP+VAARKAK+        GG  KQ G KRKL+S+TP+   R+K
Sbjct: 476  KSKNQKENTLKEQQKKRPAVAARKAKINAVNAAGGGGGSKQTGKKRKLESQTPEGGRRSK 535

Query: 1688 KAKK 1699
            KAKK
Sbjct: 536  KAKK 539


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