BLASTX nr result

ID: Glycyrrhiza24_contig00011347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011347
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex...    84   3e-14
ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...    81   2e-13
gb|AFK40144.1| unknown [Lotus japonicus]                               79   6e-13
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...    79   8e-13
ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex...    68   2e-09

>ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex subunit 2 [Glycine
           max]
          Length = 320

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -3

Query: 677 RMRRRVESLIQALDRAKPDPENSKKPSYNRSFKRMSLKDSRTNSFS 540
           RMRRRVESLIQAL+RAKPD ENSKK SYNRSFKR+SLKDSRTNSFS
Sbjct: 275 RMRRRVESLIQALNRAKPDVENSKKTSYNRSFKRLSLKDSRTNSFS 320


>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -3

Query: 677 RMRRRVESLIQALDRAKPDPENSKKPSYNRSFKRMSLKDSRTNSFS 540
           RMRRRVESLIQAL+RAKPD ENSKK SYNRSFKR+ LK+SRTNSFS
Sbjct: 279 RMRRRVESLIQALNRAKPDAENSKKTSYNRSFKRLGLKESRTNSFS 324


>gb|AFK40144.1| unknown [Lotus japonicus]
          Length = 324

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 677 RMRRRVESLIQALDRAKPDPENSKKPSYNRSFKRMSLKDSRTNSFS 540
           RMRRRVE+LIQALDRAKP+PE+SKK S NRSFKR+SLKDSR NSFS
Sbjct: 279 RMRRRVETLIQALDRAKPEPEDSKKTSNNRSFKRLSLKDSRVNSFS 324


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = -3

Query: 677 RMRRRVESLIQALDRAKPDPENSKKPSYNRSFKRMSLKDSRTNSFS 540
           RMRRRVESLIQAL RAKPDPE+SKK S++RSF+RMSLK+SRTNSFS
Sbjct: 330 RMRRRVESLIQALGRAKPDPESSKKTSHSRSFQRMSLKESRTNSFS 375


>ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex subunit 2 isoform 1
           [Vitis vinifera] gi|297737660|emb|CBI26861.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/48 (75%), Positives = 39/48 (81%)
 Frame = -3

Query: 677 RMRRRVESLIQALDRAKPDPENSKKPSYNRSFKRMSLKDSRTNSFS*R 534
           RMRRRVESLIQALDRAKPD E SKK    RSFKR+SLK++ TNS S R
Sbjct: 279 RMRRRVESLIQALDRAKPDLEKSKKTVQGRSFKRLSLKEAHTNSNSQR 326


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