BLASTX nr result

ID: Glycyrrhiza24_contig00011336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011336
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g...   513   e-143
ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g...   510   e-142
gb|ACU24211.1| unknown [Glycine max]                                  506   e-141
ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|2...   502   e-139

>ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 281

 Score =  513 bits (1321), Expect = e-143
 Identities = 258/282 (91%), Positives = 263/282 (93%)
 Frame = +1

Query: 217  MSGLYNPNFSPARAASPQIRSTPDVDSSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 396
            MSGLYNPNFSPARAASPQIRS P+VDS QYLSELLAEHQKLGPFMQVLPICSRLLNQEIL
Sbjct: 1    MSGLYNPNFSPARAASPQIRSNPEVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 59

Query: 397  RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 576
            RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW
Sbjct: 60   RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 119

Query: 577  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 756
            Q APASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 120  QSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 179

Query: 757  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDF 936
            IKDPDKEEKLRGRPGYEHLNEPLHILIEA+LPAN+VD+RLRQAQEIIEELLKPVDESQD+
Sbjct: 180  IKDPDKEEKLRGRPGYEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELLKPVDESQDY 239

Query: 937  IKRQQLRELAMLNSNFREEXXXXXXXXXXXXXXXMKRAKPGR 1062
            IKRQQLRELAMLNSNFREE               MKRAK GR
Sbjct: 240  IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281


>ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 281

 Score =  510 bits (1314), Expect = e-142
 Identities = 257/282 (91%), Positives = 262/282 (92%)
 Frame = +1

Query: 217  MSGLYNPNFSPARAASPQIRSTPDVDSSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 396
            MSGLYNPNFSPARAASPQIRS P+VDS QYLSELLAEHQKLGPFMQVLPICSRLLNQEIL
Sbjct: 1    MSGLYNPNFSPARAASPQIRSNPEVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 59

Query: 397  RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 576
            RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCG PGMTMDW
Sbjct: 60   RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDW 119

Query: 577  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 756
            Q APASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 120  QSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 179

Query: 757  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDF 936
            IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VD+RLRQAQEIIEELLKPVDESQD+
Sbjct: 180  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDY 239

Query: 937  IKRQQLRELAMLNSNFREEXXXXXXXXXXXXXXXMKRAKPGR 1062
            IKRQQLRELA+LNSNFREE               MKRAK GR
Sbjct: 240  IKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281


>gb|ACU24211.1| unknown [Glycine max]
          Length = 281

 Score =  506 bits (1304), Expect = e-141
 Identities = 255/282 (90%), Positives = 261/282 (92%)
 Frame = +1

Query: 217  MSGLYNPNFSPARAASPQIRSTPDVDSSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 396
            MSGLYNPNFSPARAASPQIRS P+VDS +YLSELLAEHQKLGPFMQVLPICSRLLNQEIL
Sbjct: 1    MSGLYNPNFSPARAASPQIRSNPEVDS-RYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 59

Query: 397  RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 576
            RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCG PGMTMDW
Sbjct: 60   RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDW 119

Query: 577  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 756
            Q APASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEA TGCRVYIRGKGS
Sbjct: 120  QSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEAITGCRVYIRGKGS 179

Query: 757  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDF 936
            IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VD+RLRQAQEIIEELLKPVDESQD+
Sbjct: 180  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDY 239

Query: 937  IKRQQLRELAMLNSNFREEXXXXXXXXXXXXXXXMKRAKPGR 1062
            IKRQQLRELA+LNSNFREE               MKRAK GR
Sbjct: 240  IKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281


>ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|222868316|gb|EEF05447.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  504 bits (1298), Expect = e-140
 Identities = 253/282 (89%), Positives = 260/282 (92%)
 Frame = +1

Query: 217  MSGLYNPNFSPARAASPQIRSTPDVDSSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 396
            MSGLYNP+FSPARAASPQIRSTPDVDS QYLSELLAEHQKLGPFMQ+LPICSRLLNQEI 
Sbjct: 1    MSGLYNPSFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQILPICSRLLNQEIF 59

Query: 397  RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 576
            RVSGM+SNQGFGDFDRLRHRSPSPMASSNL+SNV GTGLGGWN L QERL GPPGMTMDW
Sbjct: 60   RVSGMMSNQGFGDFDRLRHRSPSPMASSNLISNVGGTGLGGWNGLPQERLSGPPGMTMDW 119

Query: 577  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 756
            QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 120  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 179

Query: 757  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDF 936
            IKDPDKEEKL+GRPGYEHLN+PLHILIEADLPANIVD+RLRQAQEIIEELLKPVDESQDF
Sbjct: 180  IKDPDKEEKLKGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDF 239

Query: 937  IKRQQLRELAMLNSNFREEXXXXXXXXXXXXXXXMKRAKPGR 1062
            IKRQQLRELAMLNSNFREE               MKRAK GR
Sbjct: 240  IKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|222833468|gb|EEE71945.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  502 bits (1292), Expect = e-139
 Identities = 252/282 (89%), Positives = 258/282 (91%)
 Frame = +1

Query: 217  MSGLYNPNFSPARAASPQIRSTPDVDSSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIL 396
            MSGLYNPNFSPARAASPQIRSTPDVDS QYLSELLAEHQKLGPFMQVLP CSRLLNQEI 
Sbjct: 1    MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPTCSRLLNQEIF 59

Query: 397  RVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDW 576
            RVSGM+SNQGFGDFDRLRHRSPSPMASSNL+SNV GTGL GWN + QERL GPPGMTMDW
Sbjct: 60   RVSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQERLSGPPGMTMDW 119

Query: 577  QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 756
            QGAPASPSS+TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 120  QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 179

Query: 757  IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDF 936
            IKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANIVD+RLRQAQEIIEELLKPVDESQDF
Sbjct: 180  IKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDF 239

Query: 937  IKRQQLRELAMLNSNFREEXXXXXXXXXXXXXXXMKRAKPGR 1062
            IKRQQLRELAMLNSNFREE               MKRAK GR
Sbjct: 240  IKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


Top