BLASTX nr result

ID: Glycyrrhiza24_contig00011303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011303
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-l...   387   e-105
ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-l...   387   e-105
ref|XP_002517583.1| conserved hypothetical protein [Ricinus comm...   261   3e-67
ref|XP_003632878.1| PREDICTED: uncharacterized protein LOC100265...   258   1e-66
emb|CBI36264.3| unnamed protein product [Vitis vinifera]              258   1e-66

>ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 620

 Score =  387 bits (995), Expect = e-105
 Identities = 211/285 (74%), Positives = 231/285 (81%), Gaps = 4/285 (1%)
 Frame = -3

Query: 1114 VETDKGNSESSKKKHTSIIASKLQPVGEDKQMKALLSYGSVDHPQFTVLDIGNLGDNVVL 935
            VETDK N  SSKK+HT IIAS+LQPV E+KQMKAL++YGSVDHPQF++L+I N G+N+VL
Sbjct: 283  VETDKENGVSSKKRHTLIIASRLQPVEENKQMKALVTYGSVDHPQFSILNISNSGENIVL 342

Query: 934  NVGDETDSVEKHDXXXXXXXXXXXXXXXKRQATSDPDLPTTTDKVDF----DQCEAAEGV 767
             VGDETDSV++HD               KRQATSDPDLPTTT++VD     DQ EAA+GV
Sbjct: 343  YVGDETDSVQQHDSPSGKAIPMESKKAKKRQATSDPDLPTTTNEVDLAFNVDQHEAAKGV 402

Query: 766  LLDDDLSEPTMGEKLASLSLLDENKSRSDKEQESSVSMKPPSADSVHVLLKQXXXXXXXX 587
            LLDDDL+EPTMGEKLASLS+LD NKSRSD EQESSV  KPPSADSVHVLLKQ        
Sbjct: 403  LLDDDLNEPTMGEKLASLSVLDGNKSRSDTEQESSVPAKPPSADSVHVLLKQALNADDRT 462

Query: 586  XXXXXLYTQDEKVIKKSIAQLNPSNVLKLLNSLISIIESRGAILACALPWLKCLLLQHAS 407
                 L+TQDEKVI+KSIAQLNPSNVLKLL SLISIIESRG+IL CALPWLKCLLLQHAS
Sbjct: 463  LLLDCLFTQDEKVIRKSIAQLNPSNVLKLLYSLISIIESRGSILVCALPWLKCLLLQHAS 522

Query: 406  GIMSQESSLKVLNSLYQLNESRVSTFKSAIQLSSCLDILYTGVID 272
            GIMSQESSLK LNSLYQL ESRVSTFKSAIQLSSCLD L  G ID
Sbjct: 523  GIMSQESSLKALNSLYQLIESRVSTFKSAIQLSSCLDTLRIGAID 567


>ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 622

 Score =  387 bits (994), Expect = e-105
 Identities = 212/285 (74%), Positives = 231/285 (81%), Gaps = 4/285 (1%)
 Frame = -3

Query: 1114 VETDKGNSESSKKKHTSIIASKLQPVGEDKQMKALLSYGSVDHPQFTVLDIGNLGDNVVL 935
            VET+K N  SSKK+H SIIAS+LQPV EDKQ+KAL++YGSVDHPQF+VL+I N G+N+VL
Sbjct: 283  VETEKENGVSSKKRHASIIASRLQPVEEDKQIKALVTYGSVDHPQFSVLNISNSGENIVL 342

Query: 934  NVGDETDSVEKHDXXXXXXXXXXXXXXXKRQATSDPDLPTTTDKVDF----DQCEAAEGV 767
             VGDETDSV++HD               KRQATSDPD PT+TD+ D     DQ EAAEGV
Sbjct: 343  YVGDETDSVQQHDSPSGKAIPMESKKVKKRQATSDPDPPTSTDEEDLVFNVDQHEAAEGV 402

Query: 766  LLDDDLSEPTMGEKLASLSLLDENKSRSDKEQESSVSMKPPSADSVHVLLKQXXXXXXXX 587
            LLDDDL+EPTMGEKLASLSLLDENKSRS+ EQESSV  KPPSADSVHVLLKQ        
Sbjct: 403  LLDDDLNEPTMGEKLASLSLLDENKSRSEIEQESSVPAKPPSADSVHVLLKQALNADDRT 462

Query: 586  XXXXXLYTQDEKVIKKSIAQLNPSNVLKLLNSLISIIESRGAILACALPWLKCLLLQHAS 407
                 LYTQDEKVI+KSIAQLN SNVLKLL SLISIIESRG+ILACALPWLKCLLLQHAS
Sbjct: 463  LLLDCLYTQDEKVIRKSIAQLNTSNVLKLLYSLISIIESRGSILACALPWLKCLLLQHAS 522

Query: 406  GIMSQESSLKVLNSLYQLNESRVSTFKSAIQLSSCLDILYTGVID 272
            GIMSQESSLK LNSLYQL ESRVSTFKSAIQLSSCLD L+ G ID
Sbjct: 523  GIMSQESSLKALNSLYQLIESRVSTFKSAIQLSSCLDTLHIGAID 567


>ref|XP_002517583.1| conserved hypothetical protein [Ricinus communis]
            gi|223543215|gb|EEF44747.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 634

 Score =  261 bits (666), Expect = 3e-67
 Identities = 143/290 (49%), Positives = 197/290 (67%), Gaps = 8/290 (2%)
 Frame = -3

Query: 1117 KVETDKGNSESSKKKHTSIIASKLQPVGEDKQMKALLSYGSVDHPQFTVLDIGNLGDNVV 938
            K ET++ N + SKK   SI+A++L  + +DKQ   +++YG +D+P+F  +++ N G+N++
Sbjct: 285  KSETNQHNGDYSKKHRPSILAAQLHDIKDDKQFTVVIAYGPIDYPKFRTVNVTNSGENIL 344

Query: 937  LNVGDETDSVEKHDXXXXXXXXXXXXXXXK--------RQATSDPDLPTTTDKVDFDQCE 782
            +N  D T++V ++                         ++A S+ D P+    VD +  E
Sbjct: 345  VNDTDVTETVRENGISKDSNYLESEATIASTLKKKTKKKRAASEMD-PSAPGDVDTENGE 403

Query: 781  AAEGVLLDDDLSEPTMGEKLASLSLLDENKSRSDKEQESSVSMKPPSADSVHVLLKQXXX 602
            A  GVL++DD++EPTMGEKLASL+L D +K++  ++ ES    KPPSADSV++LLKQ   
Sbjct: 404  AMNGVLVEDDVNEPTMGEKLASLNLQDNDKTKDQEKPESPPHAKPPSADSVNILLKQALH 463

Query: 601  XXXXXXXXXXLYTQDEKVIKKSIAQLNPSNVLKLLNSLISIIESRGAILACALPWLKCLL 422
                      LYTQ+EKVI  SI+QLNPS+V +LLNSL++II+SRGAILAC+LPWLK LL
Sbjct: 464  AEDRALLLDCLYTQNEKVIANSISQLNPSDVHRLLNSLLTIIDSRGAILACSLPWLKVLL 523

Query: 421  LQHASGIMSQESSLKVLNSLYQLNESRVSTFKSAIQLSSCLDILYTGVID 272
            LQHASGIMSQ+SSL  LNSLYQ+ ESRVSTF SA+QLSS LD LY  V+D
Sbjct: 524  LQHASGIMSQDSSLVALNSLYQIIESRVSTFPSALQLSSYLDFLYAEVVD 573


>ref|XP_003632878.1| PREDICTED: uncharacterized protein LOC100265278 isoform 2 [Vitis
            vinifera] gi|359483011|ref|XP_002281427.2| PREDICTED:
            uncharacterized protein LOC100265278 isoform 1 [Vitis
            vinifera]
          Length = 357

 Score =  258 bits (660), Expect = 1e-66
 Identities = 150/295 (50%), Positives = 188/295 (63%), Gaps = 13/295 (4%)
 Frame = -3

Query: 1117 KVETDKGNSESSKKKHTSIIASKLQPVGEDKQMKALLSYGSVDHPQFTVLDIGNLGDNVV 938
            + E D+ +S S+KK  TSII ++L  +  D  + AL+ YGS++ PQF +L+I N G+++V
Sbjct: 6    EAEIDQKHSGSTKKSRTSIITARLNALQSDGWVTALVCYGSINSPQFNLLEISNPGEDIV 65

Query: 937  L-----------NVGDETDSVEKHDXXXXXXXXXXXXXXXKRQ-ATSDPDLPTTTDKVDF 794
            +             G E   +   D                ++ A SDPDL    + VD 
Sbjct: 66   VAATDNIVKTVAEAGRENGVLAGKDLELEAVAEPIQNKKSNKKRAASDPDLAAAENMVDI 125

Query: 793  DQCEAAEGVLLDDDLSEPTMGEKLASLSLLDE-NKSRSDKEQESSVSMKPPSADSVHVLL 617
               EA +GV +DDD  EPTMGEKL SL+L+D  +  ++ + QESS+   PPSADSVHVLL
Sbjct: 126  GHGEAVDGVQIDDDWDEPTMGEKLESLNLIDNADNGKTRENQESSLHTMPPSADSVHVLL 185

Query: 616  KQXXXXXXXXXXXXXLYTQDEKVIKKSIAQLNPSNVLKLLNSLISIIESRGAILACALPW 437
            KQ             LYTQDEKVI  S++ LNPS+VLKLL SLIS+IESRGAIL CALPW
Sbjct: 186  KQALNADDRALLLDCLYTQDEKVIANSVSLLNPSHVLKLLGSLISMIESRGAILVCALPW 245

Query: 436  LKCLLLQHASGIMSQESSLKVLNSLYQLNESRVSTFKSAIQLSSCLDILYTGVID 272
            L+ LLLQHASGIMSQESSL  LNSL+QL ESRVSTF+ A+QL SCLD LY GV D
Sbjct: 246  LRSLLLQHASGIMSQESSLLALNSLFQLIESRVSTFRPALQLQSCLDFLYAGVGD 300


>emb|CBI36264.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  258 bits (660), Expect = 1e-66
 Identities = 150/295 (50%), Positives = 188/295 (63%), Gaps = 13/295 (4%)
 Frame = -3

Query: 1117 KVETDKGNSESSKKKHTSIIASKLQPVGEDKQMKALLSYGSVDHPQFTVLDIGNLGDNVV 938
            + E D+ +S S+KK  TSII ++L  +  D  + AL+ YGS++ PQF +L+I N G+++V
Sbjct: 286  EAEIDQKHSGSTKKSRTSIITARLNALQSDGWVTALVCYGSINSPQFNLLEISNPGEDIV 345

Query: 937  L-----------NVGDETDSVEKHDXXXXXXXXXXXXXXXKRQ-ATSDPDLPTTTDKVDF 794
            +             G E   +   D                ++ A SDPDL    + VD 
Sbjct: 346  VAATDNIVKTVAEAGRENGVLAGKDLELEAVAEPIQNKKSNKKRAASDPDLAAAENMVDI 405

Query: 793  DQCEAAEGVLLDDDLSEPTMGEKLASLSLLDE-NKSRSDKEQESSVSMKPPSADSVHVLL 617
               EA +GV +DDD  EPTMGEKL SL+L+D  +  ++ + QESS+   PPSADSVHVLL
Sbjct: 406  GHGEAVDGVQIDDDWDEPTMGEKLESLNLIDNADNGKTRENQESSLHTMPPSADSVHVLL 465

Query: 616  KQXXXXXXXXXXXXXLYTQDEKVIKKSIAQLNPSNVLKLLNSLISIIESRGAILACALPW 437
            KQ             LYTQDEKVI  S++ LNPS+VLKLL SLIS+IESRGAIL CALPW
Sbjct: 466  KQALNADDRALLLDCLYTQDEKVIANSVSLLNPSHVLKLLGSLISMIESRGAILVCALPW 525

Query: 436  LKCLLLQHASGIMSQESSLKVLNSLYQLNESRVSTFKSAIQLSSCLDILYTGVID 272
            L+ LLLQHASGIMSQESSL  LNSL+QL ESRVSTF+ A+QL SCLD LY GV D
Sbjct: 526  LRSLLLQHASGIMSQESSLLALNSLFQLIESRVSTFRPALQLQSCLDFLYAGVGD 580


Top