BLASTX nr result

ID: Glycyrrhiza24_contig00011285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011285
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containi...   596   e-168
ref|XP_003590654.1| WD repeat-containing protein [Medicago trunc...   568   e-159
ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|2...   497   e-138
emb|CBI26594.3| unnamed protein product [Vitis vinifera]              491   e-136
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   491   e-136

>ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Glycine max]
          Length = 516

 Score =  596 bits (1536), Expect = e-168
 Identities = 305/381 (80%), Positives = 326/381 (85%), Gaps = 2/381 (0%)
 Frame = +1

Query: 34   MMQLCKRVMLLRSVGRYLAVARHFSA--EAARTDTAAXXXXXXXXXXXXXXXXVYSKRSA 207
            MMQL K   LLRSVG YLAV RHFSA  EA     AA                VY KRSA
Sbjct: 1    MMQLRKTDTLLRSVGTYLAVVRHFSASAEARVGSAAASSSGGGDTLGRRLLSLVYPKRSA 60

Query: 208  VVTINKWKEEGHAPPRKYQLNRIVRELRKSKRYKHALEVCEWMTLQKDIKLVPGDYAVHL 387
            VV INKWKEEGH PPRKYQLNRIVRELRK KRYKHALEVCEWMTLQKD+KLV GDYAVHL
Sbjct: 61   VVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYAVHL 120

Query: 388  DLIAKVRGLNSAEKFFEDLPDRMSGQQTCHALLHAYVQNNLADKAEALMSKMSECGFLGC 567
            DLI KVRGLNSAEKFFEDLPDRM G+QTC ALLHAYVQNNL DKAEALM KMSEC  L  
Sbjct: 121  DLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLIN 180

Query: 568  SLPYNHMMSLYISNGKLEKVPKIFEELKMKTSPNVVSFNLMLTACASQNDVETAERVLLE 747
             LPYNHM+SLYISNGKLEKVPKI +ELKM TSP++V+FNL L ACASQNDVETAERVLLE
Sbjct: 181  PLPYNHMISLYISNGKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAERVLLE 240

Query: 748  LKKAKIDPDWVTYSTLTNLYIKNECLEKAGSTLKEMESRTSRKTRVAYSSLLSLHTNMGN 927
            LKKAKIDPDWVTYSTLTNLYIKN  LEKAG+T+KEME+RTSRKTRVAYSSLLSLHTNMGN
Sbjct: 241  LKKAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGN 300

Query: 928  KDEVSRIWKKMKACFRQMNDNEYICMMSSLVKLGDFAEAENLYKEWESVSRTNDVRVSNI 1107
            KD+V+RIW+KMKA FR+MNDNEYICM+SSL+KLGDFA AE+LY+EWESVS TNDVRVSNI
Sbjct: 301  KDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNI 360

Query: 1108 LLASYVNQGQMEVAENFCNQI 1170
            LL SY+NQ QME+AE+FCNQI
Sbjct: 361  LLGSYINQDQMEMAEDFCNQI 381


>ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
            gi|355479702|gb|AES60905.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 562

 Score =  568 bits (1463), Expect = e-159
 Identities = 290/377 (76%), Positives = 318/377 (84%), Gaps = 6/377 (1%)
 Frame = +1

Query: 58   MLLRSVGRYLAV-ARHFSAEAARTD-TAAXXXXXXXXXXXXXXXXVYSKRSAVVTINKWK 231
            M LRSVG YLA  ARH S E AR   TAA                VY KRSAV+ INKWK
Sbjct: 1    MSLRSVGSYLATTARHLSTEPARRGVTAASSSSGGDTLGRRLLSLVYPKRSAVIAINKWK 60

Query: 232  EEGHAPPRKYQLNRIVRELRKSKRYKHALEVCEWMTLQKDIKLVPGDYAVHLDLIAKVRG 411
            EEGH  PRKYQLNR++RELRK+KRYKHALEVCEWM LQ DIKLV GDYAV LDLI KVRG
Sbjct: 61   EEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRG 120

Query: 412  LNSAEKFFEDLPDRMSGQQTCHALLHAYVQNNLADKAEALMSKMSECGFLGCSLPYNHMM 591
            LNSAEKFFEDLPD+M GQ TC ALLHAYVQNNL +KAEALMSKMSECGFL   +PYN MM
Sbjct: 121  LNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMM 180

Query: 592  SLYISNGKLEKVPKIFEELKMKTSPNVVSFNLMLTACASQNDVETAERVLLELKKAKIDP 771
            SLYISNGKLEKVPK+FEELK+ TSP+VV+FNL+LTACAS+NDVETAERVLL+LKKAK+DP
Sbjct: 181  SLYISNGKLEKVPKLFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDP 240

Query: 772  DWVTYSTLTNLYIKN----ECLEKAGSTLKEMESRTSRKTRVAYSSLLSLHTNMGNKDEV 939
            DWVTYSTLTNLYI+N    +CLEKA STLKEME RTSR+TRVAYSSLLSLH NMGN DEV
Sbjct: 241  DWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEV 300

Query: 940  SRIWKKMKACFRQMNDNEYICMMSSLVKLGDFAEAENLYKEWESVSRTNDVRVSNILLAS 1119
            +RIW KMKACF +M+D+EY+CM+SSLVKLGDFA  ENLYKEWESVS TNDVRVSN+LL S
Sbjct: 301  NRIWGKMKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTS 360

Query: 1120 YVNQGQMEVAENFCNQI 1170
            YV+QGQME+AE FCNQ+
Sbjct: 361  YVDQGQMEMAEIFCNQL 377


>ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|222857027|gb|EEE94574.1|
            predicted protein [Populus trichocarpa]
          Length = 513

 Score =  497 bits (1279), Expect = e-138
 Identities = 254/377 (67%), Positives = 291/377 (77%), Gaps = 6/377 (1%)
 Frame = +1

Query: 58   MLLRSV-GRYLAVARHFSAEAAR-----TDTAAXXXXXXXXXXXXXXXXVYSKRSAVVTI 219
            ML+R+V G   A AR FSA A       +                    VY KRSAV+TI
Sbjct: 1    MLVRNVRGTLAAAARQFSAAAVTEKGIVSGGEGKKSGGGDTLGRRLFSLVYGKRSAVITI 60

Query: 220  NKWKEEGHAPPRKYQLNRIVRELRKSKRYKHALEVCEWMTLQKDIKLVPGDYAVHLDLIA 399
             KWKEEGH   RKY+LNRIVRELRK KRYKHALEVCEWMT Q DIKLVPGDYAVHLDLIA
Sbjct: 61   RKWKEEGHNV-RKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVHLDLIA 119

Query: 400  KVRGLNSAEKFFEDLPDRMSGQQTCHALLHAYVQNNLADKAEALMSKMSECGFLGCSLPY 579
            K+RGLNSAEKFFED+PD+M   Q C ALLH YVQN    KAEALM KMSECGFL  +LPY
Sbjct: 120  KIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALPY 179

Query: 580  NHMMSLYISNGKLEKVPKIFEELKMKTSPNVVSFNLMLTACASQNDVETAERVLLELKKA 759
            NHM+S+Y++NG+LEKV +I +ELK KTSP+VV++N+ LTACASQNDVETAE+V +ELKK+
Sbjct: 180  NHMLSVYVANGQLEKVAEIIQELKKKTSPDVVTYNMWLTACASQNDVETAEKVFMELKKS 239

Query: 760  KIDPDWVTYSTLTNLYIKNECLEKAGSTLKEMESRTSRKTRVAYSSLLSLHTNMGNKDEV 939
            K+DPDWVTYSTLTNLYIK ECLEKA  TLKE+E R S+K RV YSSLLSLH NM +KD +
Sbjct: 240  KLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKDKDGL 299

Query: 940  SRIWKKMKACFRQMNDNEYICMMSSLVKLGDFAEAENLYKEWESVSRTNDVRVSNILLAS 1119
             R W KMK+ F +MND EY CM+SSLVKLG+F  AENLY EWESVS T D RVSNI+LAS
Sbjct: 300  HRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVSNIVLAS 359

Query: 1120 YVNQGQMEVAENFCNQI 1170
            Y+N+ QME AENFC ++
Sbjct: 360  YINRNQMEDAENFCQRM 376


>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  491 bits (1264), Expect = e-136
 Identities = 252/393 (64%), Positives = 293/393 (74%), Gaps = 22/393 (5%)
 Frame = +1

Query: 58   MLLRSVGRYLAVARHFSAEAA----------------------RTDTAAXXXXXXXXXXX 171
            M  + V   LA  RHFSAE A                      +T               
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 172  XXXXXVYSKRSAVVTINKWKEEGHAPPRKYQLNRIVRELRKSKRYKHALEVCEWMTLQKD 351
                 VY+KRSAV+ I +W+EEGH   RKY+LNRIVRELRK KRYKHALE+CEWMT Q D
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTV-RKYELNRIVRELRKLKRYKHALEICEWMTKQHD 119

Query: 352  IKLVPGDYAVHLDLIAKVRGLNSAEKFFEDLPDRMSGQQTCHALLHAYVQNNLADKAEAL 531
            IKL+ GDYAVHLDLIAK+RGL SAEKFFEDL D+M GQ TC ALLH YVQN +++KAEAL
Sbjct: 120  IKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEAL 179

Query: 532  MSKMSECGFLGCSLPYNHMMSLYISNGKLEKVPKIFEELKMKTSPNVVSFNLMLTACASQ 711
            M KMSECGFL C LPYNHM+SLYIS+G+LEKVP + +ELK  TSP+VV++NL LT CASQ
Sbjct: 180  MEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQ 239

Query: 712  NDVETAERVLLELKKAKIDPDWVTYSTLTNLYIKNECLEKAGSTLKEMESRTSRKTRVAY 891
            NDVETAE+VLLE+KKAKIDPDWVTYS+LTNLYIK   L+KA +TL EME RTSRK R+AY
Sbjct: 240  NDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAY 299

Query: 892  SSLLSLHTNMGNKDEVSRIWKKMKACFRQMNDNEYICMMSSLVKLGDFAEAENLYKEWES 1071
            SSL+SLHTNM +KD V RIWKK+K+ F +MND EY CM+SSLVKLG+F EAENLY EW S
Sbjct: 300  SSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTS 359

Query: 1072 VSRTNDVRVSNILLASYVNQGQMEVAENFCNQI 1170
            VS T D RV NILLA+Y+N+ +ME+AE F NQ+
Sbjct: 360  VSPTGDSRVPNILLAAYINKNEMEMAEKFYNQM 392


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  491 bits (1264), Expect = e-136
 Identities = 252/393 (64%), Positives = 293/393 (74%), Gaps = 22/393 (5%)
 Frame = +1

Query: 58   MLLRSVGRYLAVARHFSAEAA----------------------RTDTAAXXXXXXXXXXX 171
            M  + V   LA  RHFSAE A                      +T               
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 172  XXXXXVYSKRSAVVTINKWKEEGHAPPRKYQLNRIVRELRKSKRYKHALEVCEWMTLQKD 351
                 VY+KRSAV+ I +W+EEGH   RKY+LNRIVRELRK KRYKHALE+CEWMT Q D
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTV-RKYELNRIVRELRKLKRYKHALEICEWMTKQHD 119

Query: 352  IKLVPGDYAVHLDLIAKVRGLNSAEKFFEDLPDRMSGQQTCHALLHAYVQNNLADKAEAL 531
            IKL+ GDYAVHLDLIAK+RGL SAEKFFEDL D+M GQ TC ALLH YVQN +++KAEAL
Sbjct: 120  IKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEAL 179

Query: 532  MSKMSECGFLGCSLPYNHMMSLYISNGKLEKVPKIFEELKMKTSPNVVSFNLMLTACASQ 711
            M KMSECGFL C LPYNHM+SLYIS+G+LEKVP + +ELK  TSP+VV++NL LT CASQ
Sbjct: 180  MEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQ 239

Query: 712  NDVETAERVLLELKKAKIDPDWVTYSTLTNLYIKNECLEKAGSTLKEMESRTSRKTRVAY 891
            NDVETAE+VLLE+KKAKIDPDWVTYS+LTNLYIK   L+KA +TL EME RTSRK R+AY
Sbjct: 240  NDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAY 299

Query: 892  SSLLSLHTNMGNKDEVSRIWKKMKACFRQMNDNEYICMMSSLVKLGDFAEAENLYKEWES 1071
            SSL+SLHTNM +KD V RIWKK+K+ F +MND EY CM+SSLVKLG+F EAENLY EW S
Sbjct: 300  SSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTS 359

Query: 1072 VSRTNDVRVSNILLASYVNQGQMEVAENFCNQI 1170
            VS T D RV NILLA+Y+N+ +ME+AE F NQ+
Sbjct: 360  VSPTGDSRVPNILLAAYINKNEMEMAEKFYNQM 392


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