BLASTX nr result

ID: Glycyrrhiza24_contig00011252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011252
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like ...    89   4e-16
gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]                86   3e-15
ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like ...    84   1e-14
ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like ...    74   1e-11

>ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 475

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 63/134 (47%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
 Frame = -2

Query: 365 MQPCSREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHMSHQQLNATTPHHFDPTSHDD 186
           MQPCS+EM                              HM+HQ   A    HFD TSHDD
Sbjct: 1   MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNS-HMNHQHQLA----HFDSTSHDD 55

Query: 185 FLEQMLSNLPSCSWPDLNPN----------NDITP-SETTPSG-----AENVVGFP-YDE 57
           FLEQMLS   SCSW DLNPN          NDI P  ETTPS        NV  F  +DE
Sbjct: 56  FLEQMLS---SCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASFSSFDE 112

Query: 56  HATLASKFRNHQIS 15
           H+TLASKFRNHQIS
Sbjct: 113 HSTLASKFRNHQIS 126


>gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
          Length = 386

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = -2

Query: 242 HQQLNATTPHHFDPTSHDDFLEQMLSNLPSCSWPDLNPNNDITPSETTPSGAENVVGFPY 63
           HQQLN      FDPTSHDDFLEQMLS LPS  W   +PN+D++ +ETTP   +NV  FP+
Sbjct: 5   HQQLNP----QFDPTSHDDFLEQMLSTLPS-FW---DPNSDLS-AETTP---DNVAAFPF 52

Query: 62  DEHATLASKFRNHQIS 15
           DEH+TL SKFRNHQI+
Sbjct: 53  DEHSTLNSKFRNHQIT 68


>ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 452

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/98 (55%), Positives = 57/98 (58%), Gaps = 19/98 (19%)
 Frame = -2

Query: 251 HMSHQQLNATTPH---HFDPTSHDDFLEQMLSNLPSCSWPDLNPN----------NDITP 111
           H   QQ +    H   HFD TSHDDFLEQMLS   SCSW DLN N          NDI P
Sbjct: 6   HHQQQQQHQQQQHQLAHFDSTSHDDFLEQMLS---SCSWTDLNHNKPLLWDPNTPNDIKP 62

Query: 110 -SETTPSG-----AENVVGFPYDEHATLASKFRNHQIS 15
             ETTPS        NVV   +DEH+TLASKFRNHQIS
Sbjct: 63  PDETTPSNNNDDATANVVFPSFDEHSTLASKFRNHQIS 100


>ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
           gi|223537200|gb|EEF38832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/137 (40%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
 Frame = -2

Query: 365 MQPCSREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHMSHQQLNATTPHHFDPT--SH 192
           MQPCSREM                              H    Q       HFDP+  S+
Sbjct: 1   MQPCSREMQGINTLLNQSSTATTTSTSQIPIHHNHHHHHHQDLQNQQIQNPHFDPSPSSN 60

Query: 191 DDFLEQMLSNLPSCSWPDLNPNNDITPS-------------ETTPS--GAENVVGF-PYD 60
           DDFLEQMLS LPSCSW DL    D+T +             ET PS   + N VGF  +D
Sbjct: 61  DDFLEQMLSTLPSCSWADLKSPWDLTTTANLNLPKPRDLSDETPPSLPDSNNNVGFHNFD 120

Query: 59  EHATLASKFRNHQISGG 9
           E   LASK R HQISGG
Sbjct: 121 ESVLLASKLRQHQISGG 137


>ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
          Length = 369

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/67 (62%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -2

Query: 212 HFDPTSHDDFLEQMLSNLPSCSWPDLNPNNDITPSETTPSGAENVVGFPYD-EHATLASK 36
           HFD TS+DDFL+QMLSNLPS SW         T  +TTP   +N V FPYD EHA LASK
Sbjct: 31  HFDTTSNDDFLKQMLSNLPSSSW---------TLDQTTP---DNNVVFPYDVEHANLASK 78

Query: 35  FRNHQIS 15
           FRNHQI+
Sbjct: 79  FRNHQIT 85


Top