BLASTX nr result

ID: Glycyrrhiza24_contig00011239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011239
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-l...   191   1e-46
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK...   186   4e-45
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   182   5e-44
ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-l...   180   2e-43
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l...   177   2e-42

>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 215

 Score =  191 bits (485), Expect = 1e-46
 Identities = 94/123 (76%), Positives = 97/123 (78%)
 Frame = -1

Query: 739 ILTDKFGQPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQXXXXXXX 560
           ILTDKFGQPKGFAYVEFVE EAVQEALLLNESELHGRQLKVLPKRTNVPGM         
Sbjct: 118 ILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGM--------- 168

Query: 559 XXXXXXXXXXXNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGFGKVPRFRRPSRYM 380
                           KQYRPRRFNPYMAYGFRRPYTPPYFYSPYG+GKVPRFRRP+RYM
Sbjct: 169 ----------------KQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYGKVPRFRRPNRYM 212

Query: 379 PYY 371
           PY+
Sbjct: 213 PYH 215


>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
           [Medicago truncatula]
          Length = 216

 Score =  186 bits (472), Expect = 4e-45
 Identities = 91/123 (73%), Positives = 95/123 (77%)
 Frame = -1

Query: 739 ILTDKFGQPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQXXXXXXX 560
           ILTDKFGQPKGFAYVEFVETEAVQEALLL+ESELHGRQLKVLPKRTNVPGM         
Sbjct: 119 ILTDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGM--------- 169

Query: 559 XXXXXXXXXXXNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGFGKVPRFRRPSRYM 380
                           KQYRPRRFNPYMAYGFRRPY PPY YSPYG+GK PR+RRP+RYM
Sbjct: 170 ----------------KQYRPRRFNPYMAYGFRRPYAPPYMYSPYGYGKAPRYRRPNRYM 213

Query: 379 PYY 371
           PYY
Sbjct: 214 PYY 216


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  182 bits (463), Expect = 5e-44
 Identities = 89/123 (72%), Positives = 92/123 (74%)
 Frame = -1

Query: 739 ILTDKFGQPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQXXXXXXX 560
           ILTDKFGQPKGFAYVEF+E EA+QEALLLNESELHGRQLKVLPKRTNVPGM         
Sbjct: 121 ILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGM--------- 171

Query: 559 XXXXXXXXXXXNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGFGKVPRFRRPSRYM 380
                           KQYRPRRFNPYM Y FRRPY PPYFYSPYG+GK PRFRRP RYM
Sbjct: 172 ----------------KQYRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYM 215

Query: 379 PYY 371
           PYY
Sbjct: 216 PYY 218


>ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 220

 Score =  180 bits (457), Expect = 2e-43
 Identities = 92/123 (74%), Positives = 94/123 (76%)
 Frame = -1

Query: 739 ILTDKFGQPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQXXXXXXX 560
           ILTDKFGQPKGFAYVEFVE EAVQEALLLNESELHGRQLKVLPKRTNV            
Sbjct: 124 ILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV------------ 171

Query: 559 XXXXXXXXXXXNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGFGKVPRFRRPSRYM 380
                        PGMKQYRPR FNPYMAYGFRRPYT PY YSPYG+GKVPRFRRP+RYM
Sbjct: 172 -------------PGMKQYRPRCFNPYMAYGFRRPYT-PYLYSPYGYGKVPRFRRPNRYM 217

Query: 379 PYY 371
           PYY
Sbjct: 218 PYY 220


>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
           vinifera]
          Length = 130

 Score =  177 bits (449), Expect = 2e-42
 Identities = 87/123 (70%), Positives = 91/123 (73%)
 Frame = -1

Query: 739 ILTDKFGQPKGFAYVEFVETEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQXXXXXXX 560
           ILTDK+GQPKGFAYVEF+E EAVQEALLLNESELHGRQLKVL KRTNVPGM         
Sbjct: 33  ILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGM--------- 83

Query: 559 XXXXXXXXXXXNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGFGKVPRFRRPSRYM 380
                           KQ+RPRRFNPYM Y FRRPY PPYFYSPYG+GK PRFRRP RYM
Sbjct: 84  ----------------KQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYM 127

Query: 379 PYY 371
           PYY
Sbjct: 128 PYY 130


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