BLASTX nr result

ID: Glycyrrhiza24_contig00011222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011222
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537267.1| PREDICTED: LOW QUALITY PROTEIN: apurinic end...   395   e-107
ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox prote...   369   e-100
ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]...   195   1e-47
ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox prote...   183   5e-44
ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42

>ref|XP_003537267.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
            protein-like [Glycine max]
          Length = 543

 Score =  395 bits (1014), Expect = e-107
 Identities = 216/321 (67%), Positives = 244/321 (76%)
 Frame = +3

Query: 66   MKQLLQFVSTTSINLTSFAVVQKHLNTKKTLVCPSVKAMGSKRRPFSNSSEPLSPFVEVK 245
            MK LLQFVSTTS NLTSFAV QKHLN K TLVCP+VKAMGSKR PFSNSS+P SPFVE K
Sbjct: 1    MKHLLQFVSTTS-NLTSFAVFQKHLNAK-TLVCPTVKAMGSKR-PFSNSSKPSSPFVEDK 57

Query: 246  KDMKLKGLEASPVSKKHVVKEHDVDSYSIEIERLRNDPAIVDTMTVQELRKTLKSIRVPA 425
            K++KLKGLEAS  SKK VV+E+DV+SYSIE+ERLRNDP IVDT+TVQELRKTLK   VPA
Sbjct: 58   KNVKLKGLEASLGSKKLVVEENDVNSYSIELERLRNDPTIVDTVTVQELRKTLKRFNVPA 117

Query: 426  KGRKDELLSALKSFMDNNNMCEQDTQIREEQGLLISSENTSLEMKAEKVSDEDPVDYVND 605
            KGRKD++LSA KSF+  +NMCE D+  +E++   ISSEN S+E++A+KV DED ++ VN+
Sbjct: 118  KGRKDDILSAWKSFV-GSNMCELDSHAQEKKWPWISSENASVEVEAKKVLDEDHIENVNE 176

Query: 606  TPEIFELNQGKRRLKRSGXXXXXXXXXXXXXXXXXXDEGTDAKPXXXXXXXXXXXXXXXX 785
             PEI ELNQ KRRLK+S                   DE +D KP                
Sbjct: 177  NPEISELNQAKRRLKQSESERKTIKVTTKKKVSLKSDEDSDFKPSRAKRKVSSDVASIVV 236

Query: 786  XXDEISTTAIQTEPWTVFAHKKPQKGWIAYNPRTMRPPPLTRDTKSVKLLSWNVNGLRAL 965
              +EIST  IQTEPWTV AHKKPQKGWIAYNPRTMRPPPL +DTK VKLLSWN NGLRAL
Sbjct: 237  QSEEISTATIQTEPWTVLAHKKPQKGWIAYNPRTMRPPPLAQDTKFVKLLSWNANGLRAL 296

Query: 966  LKLEGFSALQLAQREDLDVLC 1028
            LKLEGFSALQLAQRED DVLC
Sbjct: 297  LKLEGFSALQLAQREDFDVLC 317


>ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox protein-like [Glycine max]
          Length = 507

 Score =  369 bits (947), Expect = e-100
 Identities = 196/283 (69%), Positives = 219/283 (77%)
 Frame = +3

Query: 180  MGSKRRPFSNSSEPLSPFVEVKKDMKLKGLEASPVSKKHVVKEHDVDSYSIEIERLRNDP 359
            MGSKR PFSNSS+PLSPFVE  K++KLKGLEASP SKK VV+E+DV+SYSIEI+RLRNDP
Sbjct: 1    MGSKR-PFSNSSKPLSPFVEDTKNVKLKGLEASPGSKKLVVEENDVNSYSIEIQRLRNDP 59

Query: 360  AIVDTMTVQELRKTLKSIRVPAKGRKDELLSALKSFMDNNNMCEQDTQIREEQGLLISSE 539
             IVDTMTV ELRKTLK  +VPAKGRKD+LLSALKSFMD NNMCEQD+ ++E+QGLLISSE
Sbjct: 60   TIVDTMTVHELRKTLKRFKVPAKGRKDDLLSALKSFMD-NNMCEQDSHLQEKQGLLISSE 118

Query: 540  NTSLEMKAEKVSDEDPVDYVNDTPEIFELNQGKRRLKRSGXXXXXXXXXXXXXXXXXXDE 719
            N S+E+KA+ V DED ++ VN+TPEI ELNQGKRRL +S                   DE
Sbjct: 119  NASVEVKAKTVLDEDHIENVNETPEISELNQGKRRLNQSESERKTIKVTTKKKVSLKSDE 178

Query: 720  GTDAKPXXXXXXXXXXXXXXXXXXDEISTTAIQTEPWTVFAHKKPQKGWIAYNPRTMRPP 899
             +D KP                  +EIST  IQTEPWTV AHKKPQKGWIAYNPRTMRPP
Sbjct: 179  DSDFKPSRAKKKVSSDFASIVVQSEEISTATIQTEPWTVLAHKKPQKGWIAYNPRTMRPP 238

Query: 900  PLTRDTKSVKLLSWNVNGLRALLKLEGFSALQLAQREDLDVLC 1028
             L +DTK VKLLSWNVNGLRALLKLEGFSALQLAQRED DVLC
Sbjct: 239  SLAQDTKFVKLLSWNVNGLRALLKLEGFSALQLAQREDFDVLC 281


>ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]
            gi|223530409|gb|EEF32297.1| ap endonuclease, putative
            [Ricinus communis]
          Length = 486

 Score =  195 bits (496), Expect = 1e-47
 Identities = 121/286 (42%), Positives = 167/286 (58%), Gaps = 3/286 (1%)
 Frame = +3

Query: 180  MGSKRRPFSNSSEPLSPFVEVKKDM-KLKGLE--ASPVSKKHVVKEHDVDSYSIEIERLR 350
            M +KR   S+SS      +E KKD  K KGL+  A P S+ +  KE+D++  S+EI+ ++
Sbjct: 1    MTAKRHRSSSSS-----VIEDKKDSEKHKGLKRVAIPNSRGNAAKENDLEIQSVEIQSMK 55

Query: 351  NDPAIVDTMTVQELRKTLKSIRVPAKGRKDELLSALKSFMDNNNMCEQDTQIREEQGLLI 530
            +DP+ ++ MTVQ+LR TL+S+ +PAKGRK EL+S+LKSF+D + +  + ++  E++    
Sbjct: 56   DDPSKIEEMTVQQLRTTLRSVGIPAKGRKSELVSSLKSFVDKH-LDGESSKEAEDRICST 114

Query: 531  SSENTSLEMKAEKVSDEDPVDYVNDTPEIFELNQGKRRLKRSGXXXXXXXXXXXXXXXXX 710
             +E   L+     V DE+    ++   E+  L Q  R++K+S                  
Sbjct: 115  PTEYILLQNNVNNVCDEN----ISIASEVSCLKQSNRKVKQS----PSKDETVNDAQIVT 166

Query: 711  XDEGTDAKPXXXXXXXXXXXXXXXXXXDEISTTAIQTEPWTVFAHKKPQKGWIAYNPRTM 890
              E    K                   D +       EPWT+ AHKKPQK WIAYNPRTM
Sbjct: 167  TKEKLSIKKNKFSVRTSSQTRIKLSSPDNLVIEP-HAEPWTILAHKKPQKSWIAYNPRTM 225

Query: 891  RPPPLTRDTKSVKLLSWNVNGLRALLKLEGFSALQLAQREDLDVLC 1028
            RPPPL  DTK VKL+SWNVNGLRALLKLEGFSA++LAQRE+ DVLC
Sbjct: 226  RPPPLAEDTKFVKLMSWNVNGLRALLKLEGFSAVELAQRENFDVLC 271


>ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox protein-like [Vitis vinifera]
          Length = 479

 Score =  183 bits (465), Expect = 5e-44
 Identities = 115/258 (44%), Positives = 146/258 (56%), Gaps = 5/258 (1%)
 Frame = +3

Query: 267  LEASPVSKKHVVKEHDVDSYSIEIERLRNDPAIVDTMTVQELRKTLKSIRVPAKGRKDEL 446
            + + P +KK V++E+   + SIEI+ +R+DPA V  MTVQEL  TL+S+ VPAKG K +L
Sbjct: 1    MSSRPNTKKGVIEENASRTQSIEIQSIRDDPAKVKAMTVQELTTTLRSVGVPAKGCKRDL 60

Query: 447  LSALKSFMDNNNMCEQDTQIREEQGLLISSENTSLEMKAEKVSDEDPVDYVNDTPEIFEL 626
            + ALKSF+DN    ++ +Q  E+  L I S+      KA+ +S ED    VN   +   L
Sbjct: 61   VLALKSFLDNK-ASDESSQAEEQLELNILSKR-----KAKNLSVEDHEQNVNIVSDASGL 114

Query: 627  NQGKRRLKRSGXXXXXXXXXXXXXXXXXXD----EGTDAKPXXXXXXXXXXXXXXXXXXD 794
             Q KRR K+S                        E +  K                    
Sbjct: 115  KQSKRRAKQSPVEAKIEVNTEIINEKEKPSIKNKEASGNKLYQGERKASSRSSIKQIAVT 174

Query: 795  E-ISTTAIQTEPWTVFAHKKPQKGWIAYNPRTMRPPPLTRDTKSVKLLSWNVNGLRALLK 971
            E I  +  + EPWTV  HKKPQ+GWI YNPRTMRPPPLT D K VKL+SWNVNGLR LLK
Sbjct: 175  ERIDISMNEPEPWTVLTHKKPQEGWIPYNPRTMRPPPLTGDAKFVKLMSWNVNGLRGLLK 234

Query: 972  LEGFSALQLAQREDLDVL 1025
             +GFSAL+LAQRED DVL
Sbjct: 235  SKGFSALKLAQREDFDVL 252


>ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|222867279|gb|EEF04410.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  179 bits (453), Expect = 1e-42
 Identities = 108/232 (46%), Positives = 132/232 (56%)
 Frame = +3

Query: 333  EIERLRNDPAIVDTMTVQELRKTLKSIRVPAKGRKDELLSALKSFMDNNNMCEQDTQIRE 512
            E + +++DP  ++ MTVQELR TL+   VPAKGRK +L+ ALK FM          QI E
Sbjct: 1    EFQSIKDDPGKIEAMTVQELRATLRKFGVPAKGRKGDLVFALKHFMGK--------QIDE 52

Query: 513  EQGLLISSENTSLEMKAEKVSDEDPVDYVNDTPEIFELNQGKRRLKRSGXXXXXXXXXXX 692
            E+    S EN SL+   ++ SDE  V  +N   E+    Q KRR+K+S            
Sbjct: 53   ERVSFNSRENISLQKNTKRTSDESCVVSINTVSEVSGFKQSKRRMKQSPVEDEIVKV--- 109

Query: 693  XXXXXXXDEGTDAKPXXXXXXXXXXXXXXXXXXDEISTTAIQTEPWTVFAHKKPQKGWIA 872
                     GT+                     D++ T   Q EPWTV +HKKPQKGWI 
Sbjct: 110  ---------GTEI---------VTTKRKLSIKTDDLVTLP-QAEPWTVLSHKKPQKGWIP 150

Query: 873  YNPRTMRPPPLTRDTKSVKLLSWNVNGLRALLKLEGFSALQLAQREDLDVLC 1028
            YNPRTMRP PLT D  SVKL+SWNVNGLRALLK EGFSAL+LAQRE+ DVLC
Sbjct: 151  YNPRTMRPAPLT-DGNSVKLMSWNVNGLRALLKFEGFSALELAQRENFDVLC 201


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