BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011190
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   491   e-136
gb|AFK49136.1| unknown [Lotus japonicus]                              491   e-136
ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l...   485   e-134
ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago ...   477   e-132
gb|AFK43853.1| unknown [Medicago truncatula]                          476   e-132

>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  491 bits (1265), Expect = e-136
 Identities = 250/273 (91%), Positives = 259/273 (94%)
 Frame = +2

Query: 224  MGGLSLGEQHFIQGGIAQDLRCDGRKRLAYRPIYVETGVIPQANGSARVRMGVTDVIASV 403
            M GLSLGE HFIQGGIAQDLRCDGRKRL YRPI VETGVIPQ NGSARVRMG TDVIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 404  KAELGKPSLLQPDKGKVSIHIDCSSTAEPAFEGRGGDELSAELSIALQRCLLGAKSGAGA 583
            KAELGKPSLLQPDKGKVSI++DCSSTAEPAFEGRGGDEL+AELS ALQRCLLG KSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 584  GIDLISLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQVAAGASSD 763
            GIDL SL+V+EGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIP+VQVAAG S+D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 764  EKPEVDVSDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 943
            E PEVDVSDEEFLQFDTS +PVIVTLTKVGRHYIVDATSEEESQMSSAVSIS+NRQGHIC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 944  GITKRGGAGLDPSIILDMISVAKHVSEQFINKL 1042
            GITKRGG GLDPSIILDMISVAKHVSEQ INKL
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKL 273


>gb|AFK49136.1| unknown [Lotus japonicus]
          Length = 286

 Score =  491 bits (1264), Expect = e-136
 Identities = 247/273 (90%), Positives = 263/273 (96%)
 Frame = +2

Query: 224  MGGLSLGEQHFIQGGIAQDLRCDGRKRLAYRPIYVETGVIPQANGSARVRMGVTDVIASV 403
            M GLSLGE+HFIQGGIAQDLRCDGRKRL YRPIYVETGVIPQA+GSAR+RMG T+VIASV
Sbjct: 1    MVGLSLGERHFIQGGIAQDLRCDGRKRLTYRPIYVETGVIPQAHGSARIRMGATEVIASV 60

Query: 404  KAELGKPSLLQPDKGKVSIHIDCSSTAEPAFEGRGGDELSAELSIALQRCLLGAKSGAGA 583
            KAELGKPSLLQPDKGKVSI+IDCSSTAEPAFEGRGGD+LSAELS+ALQR LLGAKSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDDLSAELSVALQRSLLGAKSGAGA 120

Query: 584  GIDLISLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQVAAGASSD 763
            GIDL SL+V+EGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIP+VQVAAGAS D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 764  EKPEVDVSDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 943
            EKPEV++SD+EFLQFDTSG+PVIVTLTKVGRH IVDATSEEESQMSSAVSIS+NRQGHIC
Sbjct: 181  EKPEVEISDDEFLQFDTSGVPVIVTLTKVGRHSIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 944  GITKRGGAGLDPSIILDMISVAKHVSEQFINKL 1042
            GITKRG  GLDPSI+LDMISVAKHVSEQ INKL
Sbjct: 241  GITKRGSVGLDPSIVLDMISVAKHVSEQLINKL 273


>ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  485 bits (1249), Expect = e-134
 Identities = 247/273 (90%), Positives = 256/273 (93%)
 Frame = +2

Query: 224  MGGLSLGEQHFIQGGIAQDLRCDGRKRLAYRPIYVETGVIPQANGSARVRMGVTDVIASV 403
            M GLSLGE HFIQGGIAQDLRCDGRKRL YRPI VETGVIPQ NGSARVRMG TDVIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 404  KAELGKPSLLQPDKGKVSIHIDCSSTAEPAFEGRGGDELSAELSIALQRCLLGAKSGAGA 583
            KAELGKPSLLQPDKGKVSI+IDCSSTAEPAFEGRGGDEL+AELS ALQ CLLG KSG GA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA 120

Query: 584  GIDLISLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQVAAGASSD 763
            GIDL SL+V+EGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIP+V+VAAG S+D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND 180

Query: 764  EKPEVDVSDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 943
            E PEVDVSDEEFLQFDTS +PVIVTLTKVGRHYIVDATSEEESQMSS VSIS+NRQGHIC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240

Query: 944  GITKRGGAGLDPSIILDMISVAKHVSEQFINKL 1042
            GITKRGG GLDPSIILDMISVAKHVSEQ INKL
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKL 273


>ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago truncatula]
            gi|355523454|gb|AET03908.1| Exosome complex exonuclease
            RRP42 [Medicago truncatula]
          Length = 286

 Score =  477 bits (1228), Expect = e-132
 Identities = 242/273 (88%), Positives = 257/273 (94%)
 Frame = +2

Query: 224  MGGLSLGEQHFIQGGIAQDLRCDGRKRLAYRPIYVETGVIPQANGSARVRMGVTDVIASV 403
            M GLSLGEQ FI+GGIA DLRCDGRKRL YRPI VETGVIPQANGSARVR+G T+VIASV
Sbjct: 1    MVGLSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASV 60

Query: 404  KAELGKPSLLQPDKGKVSIHIDCSSTAEPAFEGRGGDELSAELSIALQRCLLGAKSGAGA 583
            KAELGKPSL+QPDKGKVSI+IDCSSTAEPAFEGRG D LSA+LS ALQRCLLGAKSGAGA
Sbjct: 61   KAELGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGA 120

Query: 584  GIDLISLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQVAAGASSD 763
             ID  SLVV+EGKICWDLYIDGLVVSSDGNLLD LGAAIK ALSNTGIPKVQ+AAGASSD
Sbjct: 121  AIDRSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD 180

Query: 764  EKPEVDVSDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 943
            E+PEVDVSDE+F+QFDTSGIPVIVTLTKVG+HYIVDAT EEESQMSSAVSISINRQGHIC
Sbjct: 181  EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGKHYIVDATPEEESQMSSAVSISINRQGHIC 240

Query: 944  GITKRGGAGLDPSIILDMISVAKHVSEQFINKL 1042
            G+TKRGGAGLDPS+ILDM+SVAKHVSEQ INKL
Sbjct: 241  GVTKRGGAGLDPSVILDMVSVAKHVSEQLINKL 273


>gb|AFK43853.1| unknown [Medicago truncatula]
          Length = 286

 Score =  476 bits (1226), Expect = e-132
 Identities = 242/273 (88%), Positives = 256/273 (93%)
 Frame = +2

Query: 224  MGGLSLGEQHFIQGGIAQDLRCDGRKRLAYRPIYVETGVIPQANGSARVRMGVTDVIASV 403
            M GLSLGEQ FI+GGIA DLRCDGRKRL YRPI VETGVIPQANGSARVR+G T+VIASV
Sbjct: 1    MVGLSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASV 60

Query: 404  KAELGKPSLLQPDKGKVSIHIDCSSTAEPAFEGRGGDELSAELSIALQRCLLGAKSGAGA 583
            KAELGKPSL+QPDKGKVSI+IDCSSTAEPAFEGRG D LSA+LS ALQRCLLGAKSGAGA
Sbjct: 61   KAELGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGA 120

Query: 584  GIDLISLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQVAAGASSD 763
             ID  SLVV+EGKICWDLYIDGLVVSSDGNLLD LGAAIK ALSNTGIPKVQ+AAGASSD
Sbjct: 121  AIDRSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD 180

Query: 764  EKPEVDVSDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 943
            E+PEVDVSDE+F+QFDTSGIPVIVTLTKVG HYIVDAT EEESQMSSAVSISINRQGHIC
Sbjct: 181  EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGEHYIVDATPEEESQMSSAVSISINRQGHIC 240

Query: 944  GITKRGGAGLDPSIILDMISVAKHVSEQFINKL 1042
            G+TKRGGAGLDPS+ILDM+SVAKHVSEQ INKL
Sbjct: 241  GVTKRGGAGLDPSVILDMVSVAKHVSEQLINKL 273