BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011155
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycin...   307   2e-81
ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III s...   299   6e-79
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   275   1e-71
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   275   1e-71
ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8...   259   5e-67

>ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycine max]
           gi|255644932|gb|ACU22966.1| unknown [Glycine max]
          Length = 214

 Score =  307 bits (787), Expect = 2e-81
 Identities = 150/208 (72%), Positives = 169/208 (81%), Gaps = 14/208 (6%)
 Frame = -2

Query: 911 MFYLSRIEHKXXXXXXXLALSIREAIHMELERLFLDKVIANLGLCISVYDIRSIEGGFIY 732
           MFYLS+IEHK         L IREAIHMELE+LFLDKVIANLGLCISVYDIRSI+GGFI+
Sbjct: 1   MFYLSKIEHKLPLPPSRFVLPIREAIHMELEKLFLDKVIANLGLCISVYDIRSIDGGFIF 60

Query: 731 PGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSSDADGLRLTLGFFEDIYIPAHHLPNPNHF 552
           PGDGAPTYTVVFNL+MFRPF  EI+TA+LLSSDADGLRLT+GFF+DIYIPA  LP+PNHF
Sbjct: 61  PGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFFDDIYIPASRLPDPNHF 120

Query: 551 V--------------AQSINSKNGIWFWDYDEQTSYPIDDTDVIKFRVQSVSYPPIPVEQ 414
           V                + +SK G+W+WDY+EQ  YPI DTDV KFRV +VSYP IPVEQ
Sbjct: 121 VETEQKKRVFSGQESTTNSSSKKGVWYWDYNEQ-EYPIQDTDVTKFRVTNVSYPQIPVEQ 179

Query: 413 PKESKPFAPMLITGSLDHDGLGPVSWWF 330
           PKESKPFAPMLI+G++D DGLGPVSWWF
Sbjct: 180 PKESKPFAPMLISGAMDDDGLGPVSWWF 207


>ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc8-like
           [Glycine max]
          Length = 212

 Score =  299 bits (766), Expect = 6e-79
 Identities = 148/208 (71%), Positives = 170/208 (81%), Gaps = 14/208 (6%)
 Frame = -2

Query: 911 MFYLSRIEHKXXXXXXXLALSIREAIHMELERLFLDKVIANLGLCISVYDIRSIEGGFIY 732
           MFYLS+IEH+       L L IREAIHMELE+LFLDKVIANLGLCISVYDIRSI+GGFI+
Sbjct: 1   MFYLSKIEHELPLPPSRLVLPIREAIHMELEKLFLDKVIANLGLCISVYDIRSIDGGFIF 60

Query: 731 PGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSSDADGLRLTLGFFEDIYIPAHHLPNPNHF 552
           PGDGAPTYTVVFNL+MFRPF  EI+TA+LLSSDADGLRLT+GF++DIYIPA  LP+PNHF
Sbjct: 61  PGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFYDDIYIPASRLPDPNHF 120

Query: 551 V--------------AQSINSKNGIWFWDYDEQTSYPIDDTDVIKFRVQSVSYPPIPVEQ 414
           V                + +SK G+W+WDYDEQ  YPI  TDVIKFRV +VSYP IPVEQ
Sbjct: 121 VETEPKKRVSSGQESTANPSSKKGMWYWDYDEQ-EYPI--TDVIKFRVTNVSYPQIPVEQ 177

Query: 413 PKESKPFAPMLITGSLDHDGLGPVSWWF 330
           PKESKPFAPML++G++D DGLGP+SWWF
Sbjct: 178 PKESKPFAPMLVSGAIDDDGLGPISWWF 205


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  275 bits (703), Expect = 1e-71
 Identities = 137/193 (70%), Positives = 151/193 (78%)
 Frame = -2

Query: 911 MFYLSRIEHKXXXXXXXLALSIREAIHMELERLFLDKVIANLGLCISVYDIRSIEGGFIY 732
           MFYLS IEH        L L + EAI  ELE LFLDKVIANLGLCISVYDIRSI+GGF++
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 731 PGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSSDADGLRLTLGFFEDIYIPAHHLPNPNHF 552
           PGDGA TYTV F LVMFRPFVGEI+TAKL  SDA+GLRL+LGFF+DIYIP H +PNP H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 551 VAQSINSKNGIWFWDYDEQTSYPIDDTDVIKFRVQSVSYPPIPVEQPKESKPFAPMLITG 372
                     IW WDY EQ  +PID  D I+F+VQSVSYPPIPVEQPKESKPFAPM+I G
Sbjct: 121 EPNPEKKGQVIWIWDYQEQ-KFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMG 179

Query: 371 SLDHDGLGPVSWW 333
           SLD+DGLGPVSWW
Sbjct: 180 SLDYDGLGPVSWW 192


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  275 bits (702), Expect = 1e-71
 Identities = 135/193 (69%), Positives = 152/193 (78%)
 Frame = -2

Query: 911 MFYLSRIEHKXXXXXXXLALSIREAIHMELERLFLDKVIANLGLCISVYDIRSIEGGFIY 732
           MF+LS IEH        L L + EAI  ELE LFLDKV+ANLGLCISVYDIRSI+GGF++
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 731 PGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSSDADGLRLTLGFFEDIYIPAHHLPNPNHF 552
           PGDGA TYTV F LVMFRPFVGEI+TAKL  SDA+GL+L+LGFF+DIYIP H +PNP H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 551 VAQSINSKNGIWFWDYDEQTSYPIDDTDVIKFRVQSVSYPPIPVEQPKESKPFAPMLITG 372
                N    IW WDY EQ  +PID  D I+F+VQSVSYPPIPVEQPKESKPFAPM+I G
Sbjct: 121 EPDPENKSQVIWIWDYQEQ-KFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMG 179

Query: 371 SLDHDGLGPVSWW 333
           SLD+DGLGPVSWW
Sbjct: 180 SLDYDGLGPVSWW 192


>ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
           gi|355523081|gb|AET03535.1| DNA-directed RNA polymerase
           III subunit RPC8 [Medicago truncatula]
          Length = 220

 Score =  259 bits (663), Expect = 5e-67
 Identities = 129/197 (65%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
 Frame = -2

Query: 917 GSMFYLSRIEHKXXXXXXXLALSIREAIHMELERLFLDKVIANLGLCISVYDIRSIEGGF 738
           G MFYLS+IEHK       LA  IREAI  ELERLFLDKVI  LGLCISVYDI SIEGG 
Sbjct: 26  GPMFYLSKIEHKFALPPHLLARPIREAIQSELERLFLDKVIQKLGLCISVYDITSIEGGS 85

Query: 737 IYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSSDADGLRLTLGFFEDIYIPAHHLPNPN 558
           I+PG GAPTY VVFNL+MFRPF GEI++AK++S DADG+RL+LGFFEDIYIP HH+P P+
Sbjct: 86  IFPGAGAPTYQVVFNLIMFRPFPGEIISAKVMSLDADGVRLSLGFFEDIYIPTHHMPYPS 145

Query: 557 HFVAQSINSKNGIWFWDYDEQT-SYPID-DTDVIKFRVQSVSYPPIPVEQPKESKPFAPM 384
           ++++++   K   W W+Y E+T  + I+   +VI+F+V SVSYP IPVEQ KESKPFAPM
Sbjct: 146 YYISKNNTRK---WTWEYGEETDEFNIEISNEVIRFQVLSVSYPTIPVEQAKESKPFAPM 202

Query: 383 LITGSLDHDGLGPVSWW 333
           ++ GSL H+GLGPVSWW
Sbjct: 203 VVNGSLYHEGLGPVSWW 219