BLASTX nr result

ID: Glycyrrhiza24_contig00011094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011094
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision...   113   2e-23
ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-...   111   7e-23
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   102   3e-20
emb|CBI19401.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...    97   1e-18

>ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
           ERCC-8-like [Glycine max]
          Length = 466

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/89 (64%), Positives = 63/89 (70%)
 Frame = +1

Query: 133 HTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSAHKGAINSLQIDLTEGRXX 312
           H WK+IRDRE+GKL A  FAN IK +R+SQLQLSNHKD+VS HKGAINSLQID TEGR  
Sbjct: 8   HVWKRIRDREAGKLHASHFANRIKWNRISQLQLSNHKDIVSPHKGAINSLQIDSTEGRYL 67

Query: 313 XXXXXXXXXXXXXXQRPSEYEGGGVISKH 399
                         QRP+ YE GGVISKH
Sbjct: 68  LSAASDASVAVYDVQRPTVYEAGGVISKH 96


>ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-8-like [Glycine max]
          Length = 460

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/93 (62%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
 Frame = +1

Query: 133 HTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSAHKGAINSLQIDLTEGRXX 312
           H WK+IRDRE+GKLRA  FAN IKS+R+SQLQLSNHKD+VS HKGAINSLQ+D TEGR  
Sbjct: 8   HVWKRIRDREAGKLRANHFANRIKSNRISQLQLSNHKDIVSPHKGAINSLQVDSTEGRYL 67

Query: 313 XXXXXXXXXXXXXXQRPSEYE----GGGVISKH 399
                         QRP+ YE    GGG ISKH
Sbjct: 68  LSAASDASVAVYDVQRPTVYEAGGGGGGGISKH 100


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 479

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/98 (52%), Positives = 67/98 (68%)
 Frame = +1

Query: 109 EIKDAQNMHTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSAHKGAINSLQI 288
           E KDA  M  W++IRDRESGK R  SF N +KS+R++ LQLSN+K++VS H+GAINSLQ+
Sbjct: 26  EAKDASKM--WREIRDRESGKTRPNSFTNRVKSNRIANLQLSNYKEIVSPHRGAINSLQV 83

Query: 289 DLTEGRXXXXXXXXXXXXXXXXQRPSEYEGGGVISKHR 402
           DLTEGR                QR +++E  GVI+KH+
Sbjct: 84  DLTEGRYLISGASDASAAVFDVQRATDFEDEGVIAKHK 121


>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/88 (51%), Positives = 61/88 (69%)
 Frame = +1

Query: 139 WKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSAHKGAINSLQIDLTEGRXXXX 318
           WK + DRE+GKLR  SF+N I S R++ LQLSN+K++VS H+GA+NSLQ+DLTEGR    
Sbjct: 2   WKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLLS 61

Query: 319 XXXXXXXXXXXXQRPSEYEGGGVISKHR 402
                       QR +EYEGG +++KH+
Sbjct: 62  GASDASAAVYDIQRATEYEGGSLVAKHK 89


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/88 (51%), Positives = 61/88 (69%)
 Frame = +1

Query: 139 WKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSAHKGAINSLQIDLTEGRXXXX 318
           WK + DRE+GKLR  SF+N I S R++ LQLSN+K++VS H+GA+NSLQ+DLTEGR    
Sbjct: 2   WKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLLS 61

Query: 319 XXXXXXXXXXXXQRPSEYEGGGVISKHR 402
                       QR +EYEGG +++KH+
Sbjct: 62  GASDASAAVYDIQRATEYEGGSLVAKHK 89


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