BLASTX nr result

ID: Glycyrrhiza24_contig00011067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011067
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606095.1| Transcription factor E2F [Medicago truncatul...   223   1e-56
ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...   213   1e-53
gb|ACJ85122.1| unknown [Medicago truncatula]                          205   3e-51
ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...   196   1e-48
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   176   2e-42

>ref|XP_003606095.1| Transcription factor E2F [Medicago truncatula]
           gi|355507150|gb|AES88292.1| Transcription factor E2F
           [Medicago truncatula]
          Length = 460

 Score =  223 bits (569), Expect = 1e-56
 Identities = 116/156 (74%), Positives = 123/156 (78%)
 Frame = +2

Query: 44  MSGTRXXXXXXXXXXXEQIMQSMKRQLPFSSMKPPFVAAGDYHRFAPDHRRNLDQDSEAI 223
           MSGTR           +QIMQ  +RQLPFSSMKPPF+AA DYHRFAPDHRRN D ++EAI
Sbjct: 1   MSGTRTPPATAAP---DQIMQ--QRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAI 55

Query: 224 VVKTPQLKRKSEAADFEADSGDRMTPGSTEAPNSPFQTPVXXXXXXXXXXXRLTKCNRPG 403
           VVKTPQLKRKSEAADFEADSGDRMTPGST A NS  QTPV           R+TKCNR G
Sbjct: 56  VVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSG 115

Query: 404 TQTPGPNIGSPSGNNVTPAGPCRYDSSLGLLTKKFI 511
           TQTPG NIGSPSGNN+TPAGPCRYDSSLGLLTKKFI
Sbjct: 116 TQTPGSNIGSPSGNNLTPAGPCRYDSSLGLLTKKFI 151


>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score =  213 bits (542), Expect = 1e-53
 Identities = 109/134 (81%), Positives = 112/134 (83%)
 Frame = +2

Query: 110 MKRQLPFSSMKPPFVAAGDYHRFAPDHRRNLDQDSEAIVVKTPQLKRKSEAADFEADSGD 289
           MKRQLPFSSMKPPFVAAGDYHRFAPD R +    +EAIVVKTPQLKRKSEAADFEADSGD
Sbjct: 1   MKRQLPFSSMKPPFVAAGDYHRFAPDQRHDA---AEAIVVKTPQLKRKSEAADFEADSGD 57

Query: 290 RMTPGSTEAPNSPFQTPVXXXXXXXXXXXRLTKCNRPGTQTPGPNIGSPSGNNVTPAGPC 469
           RMTPG TEA NSPFQTPV           RLTK NR GTQTPG NIGSPSGNN+TPAGPC
Sbjct: 58  RMTPGFTEAANSPFQTPVSGKTGKGGKSFRLTKGNRLGTQTPGSNIGSPSGNNLTPAGPC 117

Query: 470 RYDSSLGLLTKKFI 511
           RYDSSLGLLTKKFI
Sbjct: 118 RYDSSLGLLTKKFI 131


>gb|ACJ85122.1| unknown [Medicago truncatula]
          Length = 224

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/125 (80%), Positives = 105/125 (84%)
 Frame = +2

Query: 137 MKPPFVAAGDYHRFAPDHRRNLDQDSEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTEA 316
           MKPPF+AA DYHRFAPDHRRN D ++EAIVVKTPQLKRKSEAADFEADSGDRMTPGST A
Sbjct: 1   MKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAA 60

Query: 317 PNSPFQTPVXXXXXXXXXXXRLTKCNRPGTQTPGPNIGSPSGNNVTPAGPCRYDSSLGLL 496
            NS  QTPV           R+TKCNR GTQTPG NIGSPSGNN+TPAGPCRYDSSLGLL
Sbjct: 61  ANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGLL 120

Query: 497 TKKFI 511
           TKKFI
Sbjct: 121 TKKFI 125


>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/140 (73%), Positives = 108/140 (77%)
 Frame = +2

Query: 92  EQIMQSMKRQLPFSSMKPPFVAAGDYHRFAPDHRRNLDQDSEAIVVKTPQLKRKSEAADF 271
           +QIM SMKRQLPFSSMKPPFVAAGDYHR            +EAIVVKTP LKRKSE ADF
Sbjct: 14  DQIMHSMKRQLPFSSMKPPFVAAGDYHRH---------DAAEAIVVKTPLLKRKSEVADF 64

Query: 272 EADSGDRMTPGSTEAPNSPFQTPVXXXXXXXXXXXRLTKCNRPGTQTPGPNIGSPSGNNV 451
           EADSGDRMT G TEA NSPFQTPV           RLTK NR GTQTPG NIGSP+G+N+
Sbjct: 65  EADSGDRMTAGFTEAANSPFQTPVSGKTGKGGKSSRLTKGNRVGTQTPGSNIGSPAGSNL 124

Query: 452 TPAGPCRYDSSLGLLTKKFI 511
           TPAGPCRYDSSLGLLTKKFI
Sbjct: 125 TPAGPCRYDSSLGLLTKKFI 144


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score =  176 bits (446), Expect = 2e-42
 Identities = 92/141 (65%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
 Frame = +2

Query: 92  EQIMQSMKRQLPFSSMKPPFVAAGDYHRFAPDHRRNLDQDSEAIVVKTPQLKRKSEAADF 271
           +QIM S+KRQLPFSSMKPPF ++GDYHRF PD R   DQ+ +AI+VK+PQLKRKSE AD+
Sbjct: 15  DQIMHSLKRQLPFSSMKPPFASSGDYHRFTPDSRL-ADQEPDAILVKSPQLKRKSEVADY 73

Query: 272 EADSGDR-MTPGSTEAPNSPFQTPVXXXXXXXXXXXRLTKCNRPGTQTPGPNIGSPSGNN 448
           EA+S DR + P   E  NSP QTP            RLTKC+R G QTP  N+GSPS NN
Sbjct: 74  EAESTDRAIGPRFXEVVNSPHQTPASVKGGKGSKS-RLTKCSRSGPQTPMSNVGSPSTNN 132

Query: 449 VTPAGPCRYDSSLGLLTKKFI 511
           +TPAGPCRYDSSLGLLTKKFI
Sbjct: 133 LTPAGPCRYDSSLGLLTKKFI 153


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