BLASTX nr result

ID: Glycyrrhiza24_contig00011033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011033
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-lik...   271   8e-71
ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|2...   230   2e-58
ref|XP_002510852.1| conserved hypothetical protein [Ricinus comm...   225   5e-57
ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-lik...   224   1e-56
ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vit...   223   3e-56

>ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-like [Glycine max]
          Length = 151

 Score =  271 bits (693), Expect = 8e-71
 Identities = 140/152 (92%), Positives = 144/152 (94%)
 Frame = +2

Query: 101 MTHSMSLISIGLRFGPIPKTKASVSGRLMPRSSAAGLRIRAVQENGGPRRLVDIIRLVPE 280
           M HS SLI +GL FGP+PKTK SVSGRL+ RSSA GLRIRAVQENGGPRRLVDIIRLVPE
Sbjct: 1   MAHSTSLIFMGLSFGPLPKTKVSVSGRLVSRSSA-GLRIRAVQENGGPRRLVDIIRLVPE 59

Query: 281 LSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTKFYY 460
            SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVTKFYY
Sbjct: 60  FSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTKFYY 119

Query: 461 SRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 556
           SRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 120 SRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 151


>ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|222859517|gb|EEE97064.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  230 bits (586), Expect = 2e-58
 Identities = 121/155 (78%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
 Frame = +2

Query: 101 MTHSMSLIS---IGLRFGPIPKTKASVSGRLMPRSSAAGLRIRAVQENGGPRRLVDIIRL 271
           M  S+SLI+   + L F P  +  +   G  + RSS   LRIRAVQEN GPRRL+DIIR 
Sbjct: 1   MAQSVSLITTCPLKLGFAPQRRVSSVKYGTSVFRSSTGRLRIRAVQENEGPRRLIDIIRT 60

Query: 272 VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTK 451
           +PELSRNYFR PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT+
Sbjct: 61  IPELSRNYFRRPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 452 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 556
           FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_002510852.1| conserved hypothetical protein [Ricinus communis]
           gi|223549967|gb|EEF51454.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  225 bits (574), Expect = 5e-57
 Identities = 116/145 (80%), Positives = 125/145 (86%)
 Frame = +2

Query: 122 ISIGLRFGPIPKTKASVSGRLMPRSSAAGLRIRAVQENGGPRRLVDIIRLVPELSRNYFR 301
           + + L FG   +      G L+ RSS   L I+AVQ+NGGP+RLVDIIR VPE SRNYFR
Sbjct: 11  VPLKLGFGFQRRVSCGKYGMLISRSSRGLLSIQAVQDNGGPQRLVDIIRRVPEFSRNYFR 70

Query: 302 SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTKFYYSRPKVTF 481
           SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVT+FYYSRPKVTF
Sbjct: 71  SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVICVLLTEYVTRFYYSRPKVTF 130

Query: 482 PVALLNNFKMGFTYGLFIDAFKLAS 556
           PVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 131 PVALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-like [Cucumis sativus]
           gi|449530953|ref|XP_004172456.1| PREDICTED:
           uncharacterized protein ycf20-like [Cucumis sativus]
          Length = 156

 Score =  224 bits (571), Expect = 1e-56
 Identities = 120/156 (76%), Positives = 129/156 (82%), Gaps = 4/156 (2%)
 Frame = +2

Query: 101 MTHSMSLISIGL-RFGPIPKTKASVSGRLMPRSSAA---GLRIRAVQENGGPRRLVDIIR 268
           M  S SL+   L  +G  PK   S     M +S  +     R++AVQ+ GGPRRLVDIIR
Sbjct: 1   MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIR 60

Query: 269 LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 448
           LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Sbjct: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120

Query: 449 KFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 556
           +FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156


>ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vitis vinifera]
           gi|225469308|ref|XP_002269782.1| PREDICTED: ycf20-like
           protein isoform 1 [Vitis vinifera]
           gi|297741124|emb|CBI31855.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  223 bits (567), Expect = 3e-56
 Identities = 119/155 (76%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
 Frame = +2

Query: 101 MTHSMSLISIGL-RFGPIPKTKASVS--GRLMPRSSAAGLRIRAVQENGGPRRLVDIIRL 271
           M HS+SL S  L +FG    T+ S      L  RSS     ++AVQEN GPRRLVDIIR+
Sbjct: 1   MAHSLSLPSTCLLKFGLATGTRVSHGKCSMLASRSSPRFFSVQAVQENEGPRRLVDIIRI 60

Query: 272 VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTK 451
           VP+LSRNYF+SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVL+TEYVT+
Sbjct: 61  VPQLSRNYFQSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLITEYVTR 120

Query: 452 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 556
           FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 155


Top