BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011020
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi...   692   0.0  
ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containi...   680   0.0  
emb|CBI25022.3| unnamed protein product [Vitis vinifera]              655   0.0  
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...   655   0.0  
ref|XP_002310993.1| predicted protein [Populus trichocarpa] gi|2...   654   0.0  

>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Glycine max]
          Length = 932

 Score =  692 bits (1785), Expect = 0.0
 Identities = 333/375 (88%), Positives = 357/375 (95%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            ED TKDGLKPDVVLYNNI+ AFCGMGNMDRAIC+++QMQ+ERHRPTTRTFLPIIHGFARA
Sbjct: 518  EDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARA 577

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
            GE+R+ALEIFDMMRR+GCIPTVHTYNALILGLVE+ QM KAV ILDEMN+AGV PNE TY
Sbjct: 578  GEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTY 637

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
            TTLMQGYASLGDTEKAFQYF  L+N+GLE+DVYTYEALLK+CCKSGRMQSALAVTKEMSA
Sbjct: 638  TTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSA 697

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
            + IPRNTFVYNILIDGWARRGDVWEAADLMQQMRKE + PDIHTYTSFINACCKAGDMQ 
Sbjct: 698  KNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQK 757

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            AT+IIQEMEASGIKPNLKTYTTLI+GWARAS+PEKAL CFEEMK+AG+KPDKAVYHCL+T
Sbjct: 758  ATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVT 817

Query: 284  SLLSRATLAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIEGTGGELTEALQKT 105
            SLLSRAT AQSYVYSGLLS+CREMIESEM VDMGTAVHWSRCLRKIE TGGELTEALQKT
Sbjct: 818  SLLSRATFAQSYVYSGLLSVCREMIESEMIVDMGTAVHWSRCLRKIERTGGELTEALQKT 877

Query: 104  FPPDWTSHNVFNVNS 60
            FPPDWTSHNV +VNS
Sbjct: 878  FPPDWTSHNVLDVNS 892



 Score =  158 bits (400), Expect = 2e-36
 Identities = 88/291 (30%), Positives = 146/291 (50%)
 Frame = -2

Query: 1154 DVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARAGEIRKALEIF 975
            + V+Y  I+ A C + NMDRA  ++++M+ +        +  ++ G+   G   K L +F
Sbjct: 388  NAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVF 447

Query: 974  DMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTYTTLMQGYASL 795
            D ++  G  P+V +Y  LI    +  ++ KA+ I   M ++G+  N  TY+ L+ G+  L
Sbjct: 448  DRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKL 507

Query: 794  GDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSARKIPRNTFVY 615
             D   AF  F     DGL+ DV  Y  ++ A C  G M  A+ + ++M   +    T  +
Sbjct: 508  KDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567

Query: 614  NILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQNATQIIQEMEA 435
              +I G+AR G++  A ++   MR+    P +HTY + I    +   M  A  I+ EM  
Sbjct: 568  LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNV 627

Query: 434  SGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMTS 282
            +G+ PN  TYTTL+ G+A     EKA + F  ++  G + D   Y  L+ S
Sbjct: 628  AGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKS 678



 Score =  147 bits (370), Expect = 7e-33
 Identities = 84/313 (26%), Positives = 160/313 (51%), Gaps = 2/313 (0%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            E +   G++P   +Y++++ A+    +M+ A+  +++M+ E    T  T+  I+ GFA+ 
Sbjct: 308  ESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKM 367

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHT--YNALILGLVERCQMEKAVGILDEMNLAGVSPNEC 831
            G    A   F+  +    +P+++   Y  +I    + C M++A  ++ EM   G+     
Sbjct: 368  GNADAADHWFEEAKEK--LPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPID 425

Query: 830  TYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEM 651
             Y T+M GY  +G+ EK    F +LK  G    V +Y  L+    K G++  AL ++K M
Sbjct: 426  IYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMM 485

Query: 650  SARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDM 471
                I  N   Y++LI+G+ +  D   A  + +   K+ ++PD+  Y + I A C  G+M
Sbjct: 486  KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNM 545

Query: 470  QNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCL 291
              A  ++++M+    +P  +T+  +IHG+ARA    +AL  F+ M+ +G  P    Y+ L
Sbjct: 546  DRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL 605

Query: 290  MTSLLSRATLAQS 252
            +  L+ +  + ++
Sbjct: 606  ILGLVEKRQMTKA 618



 Score =  121 bits (303), Expect = 4e-25
 Identities = 68/258 (26%), Positives = 132/258 (51%)
 Frame = -2

Query: 1055 RPTTRTFLPIIHGFARAGEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVG 876
            +P  + +  ++  + R G++  A + F+ MR  G  P+ H Y++LI        ME+A+ 
Sbjct: 281  KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340

Query: 875  ILDEMNLAGVSPNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACC 696
             + +M   G+     TY+ ++ G+A +G+ + A  +F + K     ++   Y  ++ A C
Sbjct: 341  CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHC 400

Query: 695  KSGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIH 516
            +   M  A A+ +EM  + I     +Y+ ++DG+   G+  +   +  ++++    P + 
Sbjct: 401  QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVI 460

Query: 515  TYTSFINACCKAGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEM 336
            +Y   IN   K G +  A +I + M+ SGIK N+KTY+ LI+G+ +      A   FE+ 
Sbjct: 461  SYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 520

Query: 335  KVAGWKPDKAVYHCLMTS 282
               G KPD  +Y+ ++T+
Sbjct: 521  TKDGLKPDVVLYNNIITA 538


>ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Glycine max]
          Length = 918

 Score =  680 bits (1754), Expect = 0.0
 Identities = 327/375 (87%), Positives = 352/375 (93%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            ED TKDGLKPDVVLYNNI+ AFCGM NMDRAIC++KQMQ+ER+RPTTRTFLPIIHGFARA
Sbjct: 508  EDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARA 567

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
            GE+R+ALEIFDMMRR+GCIPTVHTYNALILGLVE+ +M KAV ILD+MN+AGV PNE TY
Sbjct: 568  GEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTY 627

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
            TTLMQGYASLGDTEKAFQYF  L+N+GLE+DVYTYEALLK+CCKSGRMQSALAVTKEMSA
Sbjct: 628  TTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSA 687

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
            + IPRNTFVYNILIDGWARRGDVWEAADLMQQMRKE + PDIHTYTSF+NACCKAGDMQ 
Sbjct: 688  KNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQK 747

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            AT+IIQEMEA GIKPNLKTYTTLI+GWARAS+PEKAL CFEEMK+A  KPDKA YHCLMT
Sbjct: 748  ATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMT 807

Query: 284  SLLSRATLAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIEGTGGELTEALQKT 105
            SLLSRAT AQSYVYSGLLS+CREMIESEMTVDMGTAVHWSRCLRKIE TGGELTEALQKT
Sbjct: 808  SLLSRATFAQSYVYSGLLSVCREMIESEMTVDMGTAVHWSRCLRKIERTGGELTEALQKT 867

Query: 104  FPPDWTSHNVFNVNS 60
            FPPDWTSHN  +VNS
Sbjct: 868  FPPDWTSHNALDVNS 882



 Score =  153 bits (387), Expect = 7e-35
 Identities = 87/291 (29%), Positives = 144/291 (49%)
 Frame = -2

Query: 1154 DVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARAGEIRKALEIF 975
            + V Y +I+ A C   NMDRA  ++++M+ +        +  ++ G+   G   K L +F
Sbjct: 378  NAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVF 437

Query: 974  DMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTYTTLMQGYASL 795
            D ++  G  P+V +Y  LI    +  ++ KA+ I   M ++G+  N  TY+ L+ G+  L
Sbjct: 438  DRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKL 497

Query: 794  GDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSARKIPRNTFVY 615
             D   AF  F     DGL+ DV  Y  ++ A C    M  A+ + K+M   +    T  +
Sbjct: 498  KDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTF 557

Query: 614  NILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQNATQIIQEMEA 435
              +I G+AR G++  A ++   MR+    P +HTY + I    +   M  A  I+ +M  
Sbjct: 558  LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNV 617

Query: 434  SGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMTS 282
            +G+ PN  TYTTL+ G+A     EKA + F  ++  G + D   Y  L+ S
Sbjct: 618  AGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKS 668



 Score =  152 bits (383), Expect = 2e-34
 Identities = 85/313 (27%), Positives = 163/313 (52%), Gaps = 2/313 (0%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            E +   G++P   +Y++++ A+    +M+ A+  +++M+ E    T  T+  I+ GFA+ 
Sbjct: 298  ESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKM 357

Query: 1004 GEIRKALEIFDMMRRNGCIPTVH--TYNALILGLVERCQMEKAVGILDEMNLAGVSPNEC 831
            G+   A   F   +    +P+++  TY ++I    + C M++A  ++ EM + G+     
Sbjct: 358  GKADAADHWFKEAKEK--LPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPID 415

Query: 830  TYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEM 651
             Y T+M GY  +G+ EK    F +LK  G    V +Y  L+    K G++  AL ++K M
Sbjct: 416  IYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMM 475

Query: 650  SARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDM 471
                I  N   Y++LI+G+ +  D   A  + +   K+ ++PD+  Y + I A C   +M
Sbjct: 476  KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNM 535

Query: 470  QNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCL 291
              A  ++++M+    +P  +T+  +IHG+ARA    +AL  F+ M+ +G  P    Y+ L
Sbjct: 536  DRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL 595

Query: 290  MTSLLSRATLAQS 252
            +  L+ +  +A++
Sbjct: 596  ILGLVEKRKMAKA 608



 Score =  127 bits (319), Expect = 5e-27
 Identities = 70/265 (26%), Positives = 137/265 (51%)
 Frame = -2

Query: 1055 RPTTRTFLPIIHGFARAGEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVG 876
            +P  + +  ++  +AR G++  A + F+ M+  G  P+ H Y++LI        ME+A+ 
Sbjct: 271  KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330

Query: 875  ILDEMNLAGVSPNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACC 696
             + +M   G+     TY+ ++ G+A +G  + A  +F + K     ++  TY +++ A C
Sbjct: 331  CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHC 390

Query: 695  KSGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIH 516
            ++  M  A A+ +EM  + I     +Y+ ++DG+   G+  +   +  ++++    P + 
Sbjct: 391  QTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVI 450

Query: 515  TYTSFINACCKAGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEM 336
            +Y   IN   K G +  A QI + M+ SGIK N+KTY+ LI+G+ +      A   FE+ 
Sbjct: 451  SYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 510

Query: 335  KVAGWKPDKAVYHCLMTSLLSRATL 261
               G KPD  +Y+ ++T+    + +
Sbjct: 511  TKDGLKPDVVLYNNIITAFCGMSNM 535


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  655 bits (1691), Expect = 0.0
 Identities = 309/375 (82%), Positives = 352/375 (93%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            ED+ KDGLKPDVVLYNNI++AFCGMGNMDRAI  +K+MQ+ERHRPTTRTF+PIIHGFAR+
Sbjct: 502  EDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARS 561

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
            G++R+ALEIFDMMR +GCIPTVHT+NALILGLVE+CQMEKAV ILDEM+LAG+SPNE TY
Sbjct: 562  GDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTY 621

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
            TT+M GYASLGDT KAF+YF KLK +GLE+DVYTYEALLKACCKSGRMQSALAVT+EMS+
Sbjct: 622  TTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSS 681

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
            +KIPRNTFVYNILIDGWARRGDVWEAA+LMQQM++E +QPDIHTYTSFINACCKAGDMQ 
Sbjct: 682  QKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQR 741

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            AT+ IQEME  G+KPN+KTYTTLIHGWARASLPEKAL+CF+EMK AG KPDKAVYHCLMT
Sbjct: 742  ATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 801

Query: 284  SLLSRATLAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIEGTGGELTEALQKT 105
            SLLSRA++A+ Y+YSG++ ICREMIE E+TVDMGTAVHWS+CLRKIE TGGELTEALQKT
Sbjct: 802  SLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIERTGGELTEALQKT 861

Query: 104  FPPDWTSHNVFNVNS 60
            FPPDW S+N+ +VNS
Sbjct: 862  FPPDWNSYNI-HVNS 875



 Score =  142 bits (359), Expect = 1e-31
 Identities = 81/311 (26%), Positives = 153/311 (49%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            E +   G++P   +Y +++ A+    +M+ A+  +++M+ E    +  T+  ++ GFA+ 
Sbjct: 292  ESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKI 351

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
             +   A   F   +          Y  +I    + C M +A  ++ EM   G+      Y
Sbjct: 352  ADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIY 411

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
             T+M GY  +G+ EK    F +LK  G    V +Y  L+    K G++  AL V+K M  
Sbjct: 412  HTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEV 471

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
              I  N   Y++LI+G+ R  D   A  + + + K+ ++PD+  Y + I A C  G+M  
Sbjct: 472  AGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDR 531

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            A + ++EM+    +P  +T+  +IHG+AR+    +AL  F+ M+ +G  P    ++ L+ 
Sbjct: 532  AIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALIL 591

Query: 284  SLLSRATLAQS 252
             L+ +  + ++
Sbjct: 592  GLVEKCQMEKA 602



 Score =  126 bits (317), Expect = 9e-27
 Identities = 72/253 (28%), Positives = 129/253 (50%)
 Frame = -2

Query: 1055 RPTTRTFLPIIHGFARAGEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVG 876
            +P+ + F  ++  +AR G++  A   F+ MR  G  PT H Y +LI        ME+A+ 
Sbjct: 265  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 875  ILDEMNLAGVSPNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACC 696
             + +M   G+  +  TY+ L+ G+A + D E A  +F + K     ++   Y  ++ A C
Sbjct: 325  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 384

Query: 695  KSGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIH 516
            ++  M  A A+ +EM    I     +Y+ ++DG+   G+  +   +  ++++    P + 
Sbjct: 385  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 444

Query: 515  TYTSFINACCKAGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEM 336
            +Y   IN   K G +  A ++ + ME +GIK N+KTY+ LI+G+ R      A   FE++
Sbjct: 445  SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 504

Query: 335  KVAGWKPDKAVYH 297
               G KPD  +Y+
Sbjct: 505  VKDGLKPDVVLYN 517



 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 50/206 (24%), Positives = 97/206 (47%)
 Frame = -2

Query: 842 PNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAV 663
           P+   +  ++  YA  GD   A   F  ++  G+E   + Y +L+ A      M+ AL+ 
Sbjct: 266 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 325

Query: 662 TKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCK 483
            ++M    I  +   Y+IL+ G+A+  D   A    ++ ++ +   +   Y + I A C+
Sbjct: 326 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 385

Query: 482 AGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAV 303
           A +M  A  +++EME  GI   +  Y T++ G+      EK L  F+ +K  G+ P    
Sbjct: 386 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 445

Query: 302 YHCLMTSLLSRATLAQSYVYSGLLSI 225
           Y CL+   +    ++++   S ++ +
Sbjct: 446 YGCLINLYIKIGKVSKALEVSKMMEV 471


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic [Vitis vinifera]
          Length = 929

 Score =  655 bits (1691), Expect = 0.0
 Identities = 309/375 (82%), Positives = 352/375 (93%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            ED+ KDGLKPDVVLYNNI++AFCGMGNMDRAI  +K+MQ+ERHRPTTRTF+PIIHGFAR+
Sbjct: 523  EDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARS 582

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
            G++R+ALEIFDMMR +GCIPTVHT+NALILGLVE+CQMEKAV ILDEM+LAG+SPNE TY
Sbjct: 583  GDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTY 642

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
            TT+M GYASLGDT KAF+YF KLK +GLE+DVYTYEALLKACCKSGRMQSALAVT+EMS+
Sbjct: 643  TTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSS 702

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
            +KIPRNTFVYNILIDGWARRGDVWEAA+LMQQM++E +QPDIHTYTSFINACCKAGDMQ 
Sbjct: 703  QKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQR 762

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            AT+ IQEME  G+KPN+KTYTTLIHGWARASLPEKAL+CF+EMK AG KPDKAVYHCLMT
Sbjct: 763  ATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 822

Query: 284  SLLSRATLAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIEGTGGELTEALQKT 105
            SLLSRA++A+ Y+YSG++ ICREMIE E+TVDMGTAVHWS+CLRKIE TGGELTEALQKT
Sbjct: 823  SLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIERTGGELTEALQKT 882

Query: 104  FPPDWTSHNVFNVNS 60
            FPPDW S+N+ +VNS
Sbjct: 883  FPPDWNSYNI-HVNS 896



 Score =  142 bits (359), Expect = 1e-31
 Identities = 81/311 (26%), Positives = 153/311 (49%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            E +   G++P   +Y +++ A+    +M+ A+  +++M+ E    +  T+  ++ GFA+ 
Sbjct: 313  ESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKI 372

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
             +   A   F   +          Y  +I    + C M +A  ++ EM   G+      Y
Sbjct: 373  ADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIY 432

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
             T+M GY  +G+ EK    F +LK  G    V +Y  L+    K G++  AL V+K M  
Sbjct: 433  HTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEV 492

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
              I  N   Y++LI+G+ R  D   A  + + + K+ ++PD+  Y + I A C  G+M  
Sbjct: 493  AGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDR 552

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            A + ++EM+    +P  +T+  +IHG+AR+    +AL  F+ M+ +G  P    ++ L+ 
Sbjct: 553  AIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALIL 612

Query: 284  SLLSRATLAQS 252
             L+ +  + ++
Sbjct: 613  GLVEKCQMEKA 623



 Score =  126 bits (317), Expect = 9e-27
 Identities = 72/253 (28%), Positives = 129/253 (50%)
 Frame = -2

Query: 1055 RPTTRTFLPIIHGFARAGEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVG 876
            +P+ + F  ++  +AR G++  A   F+ MR  G  PT H Y +LI        ME+A+ 
Sbjct: 286  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 345

Query: 875  ILDEMNLAGVSPNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACC 696
             + +M   G+  +  TY+ L+ G+A + D E A  +F + K     ++   Y  ++ A C
Sbjct: 346  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 405

Query: 695  KSGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIH 516
            ++  M  A A+ +EM    I     +Y+ ++DG+   G+  +   +  ++++    P + 
Sbjct: 406  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 465

Query: 515  TYTSFINACCKAGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEM 336
            +Y   IN   K G +  A ++ + ME +GIK N+KTY+ LI+G+ R      A   FE++
Sbjct: 466  SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 525

Query: 335  KVAGWKPDKAVYH 297
               G KPD  +Y+
Sbjct: 526  VKDGLKPDVVLYN 538



 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 50/206 (24%), Positives = 97/206 (47%)
 Frame = -2

Query: 842 PNECTYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAV 663
           P+   +  ++  YA  GD   A   F  ++  G+E   + Y +L+ A      M+ AL+ 
Sbjct: 287 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 346

Query: 662 TKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCK 483
            ++M    I  +   Y+IL+ G+A+  D   A    ++ ++ +   +   Y + I A C+
Sbjct: 347 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 406

Query: 482 AGDMQNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAV 303
           A +M  A  +++EME  GI   +  Y T++ G+      EK L  F+ +K  G+ P    
Sbjct: 407 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 466

Query: 302 YHCLMTSLLSRATLAQSYVYSGLLSI 225
           Y CL+   +    ++++   S ++ +
Sbjct: 467 YGCLINLYIKIGKVSKALEVSKMMEV 492


>ref|XP_002310993.1| predicted protein [Populus trichocarpa] gi|222850813|gb|EEE88360.1|
            predicted protein [Populus trichocarpa]
          Length = 877

 Score =  654 bits (1688), Expect = 0.0
 Identities = 309/369 (83%), Positives = 351/369 (95%)
 Frame = -2

Query: 1184 EDITKDGLKPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARA 1005
            ED+ KDGLKPDVVLYNNI+KAFCGMGNMDRAI ++K+MQ++RHRPT+RTF+PIIHGFARA
Sbjct: 507  EDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARA 566

Query: 1004 GEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNECTY 825
            GE+R+ALEIFDMMRR+GCIPTVHT+NAL+LGLVE+ QMEKAV ILDEM LAGVSP+E TY
Sbjct: 567  GEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTY 626

Query: 824  TTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSA 645
            TT+M GYA+LGDT KAF+YF KL+N+GLE+DV+TYEALLKACCKSGRMQSALAVT+EMSA
Sbjct: 627  TTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSA 686

Query: 644  RKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQN 465
            + IPRNTFVYNILIDGWARRGDVWEAADLMQQM++E +QPDIHTYTSFINACCKAGDM  
Sbjct: 687  QNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLR 746

Query: 464  ATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMT 285
            AT+ IQEMEA G+KPN+KTYTTLIHGWA ASLPEKALRCFEEMK+AG KPDKAVYHCLMT
Sbjct: 747  ATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMT 806

Query: 284  SLLSRATLAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIEGTGGELTEALQKT 105
            SLLSRAT+A++Y+YSG+LSICREMIESE+TVDMGTAV+WS+CLRKIEGTGGELTEALQKT
Sbjct: 807  SLLSRATVAEAYIYSGILSICREMIESELTVDMGTAVYWSKCLRKIEGTGGELTEALQKT 866

Query: 104  FPPDWTSHN 78
            FPPDW +H+
Sbjct: 867  FPPDWNAHH 875



 Score =  152 bits (384), Expect = 2e-34
 Identities = 89/326 (27%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
 Frame = -2

Query: 1172 KDGLKPDVVLYNNIVKAFCGMGN------MDRAICILKQMQRERHRPTTRTFLPIIHGFA 1011
            ++G++  +V Y+ +V  F  +GN      MDRA  ++++M+ E        +  +++G+ 
Sbjct: 365  EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424

Query: 1010 RAGEIRKALEIFDMMRRNGCIPTVHTYNALILGLVERCQMEKAVGILDEMNLAGVSPNEC 831
              G   K L +F  ++  G  P+V +Y  LI    +  ++ KA+ +   M  AG+  N  
Sbjct: 425  MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMK 484

Query: 830  TYTTLMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEM 651
            TY+ L+ G+  L D   AF  F  +  DGL+ DV  Y  ++KA C  G M  A+ + KEM
Sbjct: 485  TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544

Query: 650  SARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDM 471
              ++    +  +  +I G+AR G++  A ++   MR+    P +HT+ + +    +   M
Sbjct: 545  QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQM 604

Query: 470  QNATQIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCL 291
            + A +I+ EM  +G+ P+  TYTT+++G+A      KA   F +++  G + D   Y  L
Sbjct: 605  EKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEAL 664

Query: 290  MTSLLSRATLAQSYVYSGLLSICREM 213
            + +      +  +      L++ REM
Sbjct: 665  LKACCKSGRMQSA------LAVTREM 684



 Score =  143 bits (361), Expect = 7e-32
 Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 6/309 (1%)
 Frame = -2

Query: 1160 KPDVVLYNNIVKAFCGMGNMDRAICILKQMQRERHRPTTRTFLPIIHGFARAGEIRKALE 981
            KP    +  +V  +   G+M RA    + M+     P++  +  +IH +A   ++ +AL 
Sbjct: 299  KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358

Query: 980  IFDMMRRNGCIPTVHTYNALILGLV------ERCQMEKAVGILDEMNLAGVSPNECTYTT 819
                M+  G   ++ TY+ ++ G        + C M++A  ++ EM   G+      Y T
Sbjct: 359  CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHT 418

Query: 818  LMQGYASLGDTEKAFQYFMKLKNDGLEVDVYTYEALLKACCKSGRMQSALAVTKEMSARK 639
            +M GY  +G+ EK    F +LK  G    V +Y  L+    K G++  AL V+K M +  
Sbjct: 419  MMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAG 478

Query: 638  IPRNTFVYNILIDGWARRGDVWEAADLMQQMRKENIQPDIHTYTSFINACCKAGDMQNAT 459
            I  N   Y++LI+G+ +  D   A  + + + K+ ++PD+  Y + I A C  G+M  A 
Sbjct: 479  IKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAI 538

Query: 458  QIIQEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGWKPDKAVYHCLMTSL 279
             +++EM+    +P  +T+  +IHG+ARA    +AL  F+ M+ +G  P    ++ L+  L
Sbjct: 539  HMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 598

Query: 278  LSRATLAQS 252
            + +  + ++
Sbjct: 599  VEKRQMEKA 607