BLASTX nr result

ID: Glycyrrhiza24_contig00010988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010988
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41645.1| unknown [Lotus japonicus]                              532   e-149
ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula] g...   531   e-148
gb|AFK36453.1| unknown [Lotus japonicus]                              496   e-138
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   496   e-138
ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin...   491   e-136

>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  532 bits (1371), Expect = e-149
 Identities = 252/323 (78%), Positives = 279/323 (86%), Gaps = 2/323 (0%)
 Frame = +1

Query: 103  MEDSSKASSSLSFTVEEDEKA--QVPPHEAIFLVLPYLPVCEVLTMSRVCTSLRDAVNND 276
            ME+SSKA SSLS TVE+ +    Q PPHEA+FLVL YLPV +VL MS+VC +LRDAVNND
Sbjct: 1    MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60

Query: 277  VLPWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFIN 456
            VLPWLNVIVERPL+SR+SDEILV+ITSKANGRLKTLALMNC H+TDKGLQRVVEQNP  N
Sbjct: 61   VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTN 120

Query: 457  KLYIPACTGITPEEVLTAVKTLCQRSSCLTTLSINGIYNLQKEHLDMLAMNLRKNLPLEE 636
            KL+IPACTGIT E V  AV+TLCQRS+CL+TL INGIYNLQKEHLDMLAMNLRKN+PLEE
Sbjct: 121  KLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEE 180

Query: 637  LQTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQC 816
             Q  QKP YYHKRGS +VF R+ENQRIIDLE CPKCFEV MVYDCPK +C ++E P  QC
Sbjct: 181  -QQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQC 239

Query: 817  RGCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTS 996
            RGC FCIPRCE+CG CV SEE EE AC D+LCLECWL+LPKCNFCNKPYCKQH NWWC+S
Sbjct: 240  RGCKFCIPRCENCGGCVGSEEEEEAACADILCLECWLQLPKCNFCNKPYCKQHENWWCSS 299

Query: 997  SDSSFLCKVCDENSHGYTYNDVL 1065
             D  FLC+VCDE+SHGYTY DVL
Sbjct: 300  LDPIFLCRVCDEHSHGYTYTDVL 322


>ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula]
            gi|355524935|gb|AET05389.1| F-box protein SKIP28
            [Medicago truncatula]
          Length = 320

 Score =  531 bits (1368), Expect = e-148
 Identities = 251/321 (78%), Positives = 280/321 (87%)
 Frame = +1

Query: 103  MEDSSKASSSLSFTVEEDEKAQVPPHEAIFLVLPYLPVCEVLTMSRVCTSLRDAVNNDVL 282
            ME+S KASSS   T  E+E+ + PPHEA+FLV+ YL V EVLTMSRVCTSLR AVNNDVL
Sbjct: 1    MEESCKASSSEMSTTVEEEEQEGPPHEAMFLVIAYLRVYEVLTMSRVCTSLRYAVNNDVL 60

Query: 283  PWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFINKL 462
             WL +IVE PLNSR+SD+ L++ITSKANGRL+TLALMNC+HV D GLQRVVEQNPFI +L
Sbjct: 61   LWLKIIVETPLNSRLSDDTLLKITSKANGRLQTLALMNCIHVADHGLQRVVEQNPFIEEL 120

Query: 463  YIPACTGITPEEVLTAVKTLCQRSSCLTTLSINGIYNLQKEHLDMLAMNLRKNLPLEELQ 642
            +IPACTGITPE VLTAVKTLCQR++CLTTLS+NGIYNLQ +HLD+L  NLRKNLPLE+  
Sbjct: 121  HIPACTGITPEGVLTAVKTLCQRANCLTTLSLNGIYNLQNDHLDVLTSNLRKNLPLEDEL 180

Query: 643  TQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCRG 822
            TQQ P+YYHKRGS+S FK  ENQRIIDLE CPKCFEVRMVYDCPK DC RKE   AQCRG
Sbjct: 181  TQQ-PIYYHKRGSVSAFKHNENQRIIDLEKCPKCFEVRMVYDCPKVDCNRKELCQAQCRG 239

Query: 823  CNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSSD 1002
            C FCIPRCE+CG CV SEE+E+ ACGD LCLECWL+LPKCNFCNKPYCKQHTNWWCTSS+
Sbjct: 240  CIFCIPRCENCGGCVGSEELEDVACGDFLCLECWLQLPKCNFCNKPYCKQHTNWWCTSSE 299

Query: 1003 SSFLCKVCDENSHGYTYNDVL 1065
            SSFLC+VCDENSHGYTY DVL
Sbjct: 300  SSFLCRVCDENSHGYTYTDVL 320


>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  496 bits (1278), Expect = e-138
 Identities = 236/300 (78%), Positives = 261/300 (87%), Gaps = 2/300 (0%)
 Frame = +1

Query: 103 MEDSSKASSSLSFTVEEDEKA--QVPPHEAIFLVLPYLPVCEVLTMSRVCTSLRDAVNND 276
           ME+SSKA SSLS TVE+ +    Q PPHEA+FLVL YLPV +VL MS+VC +LRDAVNND
Sbjct: 1   MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60

Query: 277 VLPWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFIN 456
           VLPWLNVIVERPL+SR+SDEILV+ITSKANGRLKTLALMNC H+TDKGLQRVVEQNP IN
Sbjct: 61  VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLIN 120

Query: 457 KLYIPACTGITPEEVLTAVKTLCQRSSCLTTLSINGIYNLQKEHLDMLAMNLRKNLPLEE 636
           KL+IPACTGIT E V  AV+TLCQRS+CL+TL INGIYNLQKEHLDMLAMNLRKN+PLEE
Sbjct: 121 KLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEE 180

Query: 637 LQTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQC 816
            Q  QKP YYHKRGS +VF R+ENQRIIDLE CPKCFEV MVYDCPK +C ++E P  QC
Sbjct: 181 -QQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQC 239

Query: 817 RGCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTS 996
           RGC FCIPRCE+CG CV SEE EE AC D+LCLECWL+LPKCNFCNKPYCKQH NWWC+S
Sbjct: 240 RGCKFCIPRCENCGGCVGSEEEEEAACADILCLECWLQLPKCNFCNKPYCKQHENWWCSS 299


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
            max]
          Length = 313

 Score =  496 bits (1278), Expect = e-138
 Identities = 234/321 (72%), Positives = 274/321 (85%)
 Frame = +1

Query: 103  MEDSSKASSSLSFTVEEDEKAQVPPHEAIFLVLPYLPVCEVLTMSRVCTSLRDAVNNDVL 282
            ME+SSK   S +  VE++      PHEA+FLVL YLPV EV+ MS+VCTSLRDAVNND+L
Sbjct: 1    MEESSK---SKAVEVEQEASEAKAPHEAMFLVLAYLPVYEVVVMSQVCTSLRDAVNNDIL 57

Query: 283  PWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFINKL 462
            PWLNV V+RPL+ R++D+IL++ITSKANG LKTLAL+NCMHVTD+GLQRVV+QNP INKL
Sbjct: 58   PWLNVFVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVQQNPLINKL 117

Query: 463  YIPACTGITPEEVLTAVKTLCQRSSCLTTLSINGIYNLQKEHLDMLAMNLRKNLPLEELQ 642
            +IPACTGITP  VL AVKTLCQRS+CL TLSINGIYN+QKEHLDML +NL KN PLEE  
Sbjct: 118  HIPACTGITPXGVLRAVKTLCQRSNCLKTLSINGIYNIQKEHLDMLIVNLGKNQPLEE-- 175

Query: 643  TQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCRG 822
             QQ+P+YYHKR + SVFK++E++R+IDLEICP+CFEVRMVYDCPKG C R+E P A CRG
Sbjct: 176  -QQEPVYYHKRCNFSVFKQEESRRLIDLEICPRCFEVRMVYDCPKGHCTRREWPLAPCRG 234

Query: 823  CNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSSD 1002
            CNFCIP+CE+CG C+ S EVEEG C D+ CLECWL++PKC+FCNKPYCKQH N  CTSSD
Sbjct: 235  CNFCIPKCENCGGCIESGEVEEGDCEDIFCLECWLQIPKCSFCNKPYCKQHIN--CTSSD 292

Query: 1003 SSFLCKVCDENSHGYTYNDVL 1065
            SS +CKVCDENSHGYTY DVL
Sbjct: 293  SSLICKVCDENSHGYTYTDVL 313


>ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max]
            gi|255635560|gb|ACU18130.1| unknown [Glycine max]
          Length = 278

 Score =  491 bits (1263), Expect = e-136
 Identities = 223/278 (80%), Positives = 251/278 (90%)
 Frame = +1

Query: 232  MSRVCTSLRDAVNNDVLPWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVT 411
            MS+VCTSLRDAVNND+LPWLNVIV+RPL+ R++DEIL++ITSKANGRLKTLAL+NCMHVT
Sbjct: 1    MSQVCTSLRDAVNNDILPWLNVIVQRPLSWRLNDEILIKITSKANGRLKTLALINCMHVT 60

Query: 412  DKGLQRVVEQNPFINKLYIPACTGITPEEVLTAVKTLCQRSSCLTTLSINGIYNLQKEHL 591
            D GLQRVV+QNP INKL+IPACTGITPE VL AVKTLCQRS+CL TLSINGIYN+QKEHL
Sbjct: 61   DHGLQRVVQQNPLINKLHIPACTGITPEGVLGAVKTLCQRSNCLKTLSINGIYNIQKEHL 120

Query: 592  DMLAMNLRKNLPLEELQTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDC 771
            DML MNL KN PLEE Q QQ+P+YYH+R S SVFK++E+ R+IDLEICP+CFEVRMVYDC
Sbjct: 121  DMLIMNLGKNQPLEEQQKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDC 180

Query: 772  PKGDCKRKECPHAQCRGCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFC 951
            PK  C R+E P A CRGCNFCIPRCE+CG C+ S EVEEGAC D+ CLECWL+LPKC+FC
Sbjct: 181  PKEHCTRREWPLAPCRGCNFCIPRCENCGGCIESGEVEEGACEDIFCLECWLQLPKCSFC 240

Query: 952  NKPYCKQHTNWWCTSSDSSFLCKVCDENSHGYTYNDVL 1065
            NKPYCKQHTNWWCTSSDSS +CKVCDENSHGYTY DVL
Sbjct: 241  NKPYCKQHTNWWCTSSDSSLICKVCDENSHGYTYTDVL 278


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