BLASTX nr result

ID: Glycyrrhiza24_contig00010979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010979
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520566.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   270   9e-71
ref|XP_003554248.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   263   8e-69
ref|XP_002306771.1| predicted protein [Populus trichocarpa] gi|2...   237   6e-61
ref|XP_003536499.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   235   2e-60
ref|XP_002520752.1| rac-GTP binding protein, putative [Ricinus c...   229   2e-58

>ref|XP_003520566.1| PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max]
          Length = 644

 Score =  270 bits (690), Expect = 9e-71
 Identities = 137/169 (81%), Positives = 150/169 (88%)
 Frame = -3

Query: 507 IASMTKSATGRSGVRVVVAGDRGTGKSSLIAAIASESFPEAVPPVLPPTNLPADFFPDNV 328
           +A+ + S  GRSGVRVVVAGDR TGKSSLIAAIA+ESF EAVPPVLPPT LP D +PD V
Sbjct: 1   MANHSSSFGGRSGVRVVVAGDRATGKSSLIAAIATESFAEAVPPVLPPTLLPPDLYPDAV 60

Query: 327 PLTVIDTSSSLEKQGKCNEELKGADVVVLTYACNEPQSFSRLSSYWFQELQRLEIKAPVI 148
           PLTV+DT SSLEKQ K NEELKGADVVVLTYACN+  SFSRLSSYWF ELQ+LE+K PVI
Sbjct: 61  PLTVVDTPSSLEKQRKRNEELKGADVVVLTYACNDTASFSRLSSYWFPELQKLEVKVPVI 120

Query: 147 VVGCKLDLRDESQQVSLERLMTQLLQEFKDIATCIECSAATLYQVPEVF 1
           VVGCKLDLRDESQ+VSLER+MTQLLQ+FK+I TCIECSAAT YQVPEVF
Sbjct: 121 VVGCKLDLRDESQEVSLERVMTQLLQQFKEIVTCIECSAATQYQVPEVF 169


>ref|XP_003554248.1| PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max]
          Length = 644

 Score =  263 bits (673), Expect = 8e-69
 Identities = 135/169 (79%), Positives = 147/169 (86%)
 Frame = -3

Query: 507 IASMTKSATGRSGVRVVVAGDRGTGKSSLIAAIASESFPEAVPPVLPPTNLPADFFPDNV 328
           +A+ + S  GRSGVRVVVAGDR TGKSSLIAAIA+ESF EAVPPVLPPT L  D +PD V
Sbjct: 1   MANHSSSFGGRSGVRVVVAGDRSTGKSSLIAAIATESFAEAVPPVLPPTLLAPDLYPDTV 60

Query: 327 PLTVIDTSSSLEKQGKCNEELKGADVVVLTYACNEPQSFSRLSSYWFQELQRLEIKAPVI 148
           PLTV+DT SSLEKQ K NEELK ADVVVLTYACN+  SFSRLSSYWF ELQ+LE+K PVI
Sbjct: 61  PLTVVDTPSSLEKQRKRNEELKAADVVVLTYACNDTASFSRLSSYWFPELQKLEVKVPVI 120

Query: 147 VVGCKLDLRDESQQVSLERLMTQLLQEFKDIATCIECSAATLYQVPEVF 1
           VVGCKLDLRDESQQVSLE +MTQLLQ+FK+I TCIECSAAT YQVPEVF
Sbjct: 121 VVGCKLDLRDESQQVSLECVMTQLLQQFKEIVTCIECSAATQYQVPEVF 169


>ref|XP_002306771.1| predicted protein [Populus trichocarpa] gi|222856220|gb|EEE93767.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  237 bits (605), Expect = 6e-61
 Identities = 111/163 (68%), Positives = 140/163 (85%)
 Frame = -3

Query: 489 SATGRSGVRVVVAGDRGTGKSSLIAAIASESFPEAVPPVLPPTNLPADFFPDNVPLTVID 310
           +A G++GVR+VV GDRGTGKSSLIAA A+ESFPE + PVLPPT LPADFFPD VP+T+ID
Sbjct: 8   AAGGKTGVRIVVVGDRGTGKSSLIAAAATESFPENLSPVLPPTRLPADFFPDRVPITIID 67

Query: 309 TSSSLEKQGKCNEELKGADVVVLTYACNEPQSFSRLSSYWFQELQRLEIKAPVIVVGCKL 130
           TS+SLE +GK NEELK ADV++LTYAC+ P + +RLSS+W QE +RLE+K PVIVVGCK+
Sbjct: 68  TSASLESRGKLNEELKRADVIILTYACDFPLTLTRLSSFWLQEFRRLEVKVPVIVVGCKV 127

Query: 129 DLRDESQQVSLERLMTQLLQEFKDIATCIECSAATLYQVPEVF 1
           DLRDE+Q +SLE +M  ++Q++++I TCIECSA TL QVP+VF
Sbjct: 128 DLRDENQPISLEPVMGPIMQQYREIETCIECSAVTLMQVPDVF 170


>ref|XP_003536499.1| PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max]
          Length = 650

 Score =  235 bits (600), Expect = 2e-60
 Identities = 116/172 (67%), Positives = 141/172 (81%), Gaps = 2/172 (1%)
 Frame = -3

Query: 510 RIASMT--KSATGRSGVRVVVAGDRGTGKSSLIAAIASESFPEAVPPVLPPTNLPADFFP 337
           R A+M    SA+GR  VR+ V GD  TGKS+LIAA+ASESFP++VPPVLPPT LP + FP
Sbjct: 4   RFATMVGPSSASGRREVRIAVVGDGATGKSTLIAAMASESFPKSVPPVLPPTRLPRNLFP 63

Query: 336 DNVPLTVIDTSSSLEKQGKCNEELKGADVVVLTYACNEPQSFSRLSSYWFQELQRLEIKA 157
           D+VPLT+IDT SSL KQG  NEELK AD VVLTYAC+EP SF R+++YW  EL +LE+KA
Sbjct: 64  DSVPLTLIDTPSSLAKQGTRNEELKLADTVVLTYACDEPVSFERVTTYWLPELHKLEVKA 123

Query: 156 PVIVVGCKLDLRDESQQVSLERLMTQLLQEFKDIATCIECSAATLYQVPEVF 1
           PVIVVGCKLDLRDE+Q VSLE L T ++++F ++ TC+ECSAATLYQVP+VF
Sbjct: 124 PVIVVGCKLDLRDENQLVSLESLTTHIMKQFTEVVTCVECSAATLYQVPQVF 175


>ref|XP_002520752.1| rac-GTP binding protein, putative [Ricinus communis]
           gi|223540137|gb|EEF41714.1| rac-GTP binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  229 bits (583), Expect = 2e-58
 Identities = 110/160 (68%), Positives = 137/160 (85%)
 Frame = -3

Query: 480 GRSGVRVVVAGDRGTGKSSLIAAIASESFPEAVPPVLPPTNLPADFFPDNVPLTVIDTSS 301
           G+ GVRVVVAGDR TGKSSLIAA A+E++PE VP VLPPT LPADFFPD +P+T+IDTS+
Sbjct: 10  GKVGVRVVVAGDRFTGKSSLIAAAATETYPENVPRVLPPTRLPADFFPDRIPITIIDTSA 69

Query: 300 SLEKQGKCNEELKGADVVVLTYACNEPQSFSRLSSYWFQELQRLEIKAPVIVVGCKLDLR 121
           +LE +GK  EELK ADVVVLTY+C++P + SRLSS+W +EL+RLE+K PVIVVGCKLDLR
Sbjct: 70  ALESRGKLIEELKRADVVVLTYSCDQPLTLSRLSSFWLEELRRLEVKVPVIVVGCKLDLR 129

Query: 120 DESQQVSLERLMTQLLQEFKDIATCIECSAATLYQVPEVF 1
           DE+  VSLE++M  ++Q+ ++I TCIECSA TL QVP+VF
Sbjct: 130 DEAYPVSLEQVMGPIMQQHREIETCIECSAVTLMQVPDVF 169


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