BLASTX nr result

ID: Glycyrrhiza24_contig00010977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010977
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617812.1| Nuclear transcription factor Y subunit B-3 [...   238   2e-60
gb|AFK41105.1| unknown [Medicago truncatula]                          238   2e-60
ref|XP_003532175.1| PREDICTED: nuclear transcription factor Y su...   237   3e-60
ref|XP_003553001.1| PREDICTED: nuclear transcription factor Y su...   232   1e-58
gb|AFK49662.1| nuclear transcription factor Y subunit B12 [Medic...   224   3e-56

>ref|XP_003617812.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355519147|gb|AET00771.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523229|gb|AFK49667.1| nuclear transcription factor
           Y subunit B17 [Medicago truncatula]
          Length = 187

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/155 (78%), Positives = 127/155 (81%)
 Frame = -2

Query: 896 ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 717
           ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE
Sbjct: 18  ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 77

Query: 716 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKTVAARDKDAMPIGAXXXXXS 537
           KRKTINGDDLLWAMTTLGFE+YVEPLK+YLQRFREIEGEKTVAARDKD +   +      
Sbjct: 78  KRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEGEKTVAARDKDGVAPSSSSSSVF 137

Query: 536 AFDYAXXXXXXXXXXXXQGHVYGSGGFHQVTGAPV 432
            +               QGHVYGSGGFHQV G PV
Sbjct: 138 DYGAPPPQVGLIMHHQHQGHVYGSGGFHQVPGGPV 172


>gb|AFK41105.1| unknown [Medicago truncatula]
          Length = 184

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/155 (78%), Positives = 127/155 (81%)
 Frame = -2

Query: 896 ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 717
           ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE
Sbjct: 18  ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 77

Query: 716 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKTVAARDKDAMPIGAXXXXXS 537
           KRKTINGDDLLWAMTTLGFE+YVEPLK+YLQRFREIEGEKTVAARDKD +   +      
Sbjct: 78  KRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEGEKTVAARDKDGVAPSSSSSSVF 137

Query: 536 AFDYAXXXXXXXXXXXXQGHVYGSGGFHQVTGAPV 432
            +               QGHVYGSGGFHQV G PV
Sbjct: 138 DYGAPPPQVGLIMHHQHQGHVYGSGGFHQVPGGPV 172


>ref|XP_003532175.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Glycine
           max]
          Length = 191

 Score =  237 bits (605), Expect = 3e-60
 Identities = 123/156 (78%), Positives = 129/156 (82%), Gaps = 1/156 (0%)
 Frame = -2

Query: 896 ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 717
           E+SPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE
Sbjct: 19  EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 78

Query: 716 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKTVAARDKDAMPI-GAXXXXX 540
           KRKTINGDDLLWAMTTLGFEDYVEPLK YLQRFRE+EGEKTVAARDKDA P+  A     
Sbjct: 79  KRKTINGDDLLWAMTTLGFEDYVEPLKGYLQRFREMEGEKTVAARDKDAPPLTNATNSAY 138

Query: 539 SAFDYAXXXXXXXXXXXXQGHVYGSGGFHQVTGAPV 432
            + +YA            QGHVYGS GFHQV G  +
Sbjct: 139 ESANYAAAAAVPGGIMMHQGHVYGSAGFHQVAGGAI 174


>ref|XP_003553001.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Glycine
           max]
          Length = 188

 Score =  232 bits (592), Expect = 1e-58
 Identities = 122/155 (78%), Positives = 127/155 (81%)
 Frame = -2

Query: 896 ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 717
           E+SPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE
Sbjct: 19  EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 78

Query: 716 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKTVAARDKDAMPIGAXXXXXS 537
           KRKTINGDDLLWAMTTLGFEDYVEPLK YLQRFRE+EGEKTVAARDKDA P        S
Sbjct: 79  KRKTINGDDLLWAMTTLGFEDYVEPLKGYLQRFREMEGEKTVAARDKDAPP--PTNATNS 136

Query: 536 AFDYAXXXXXXXXXXXXQGHVYGSGGFHQVTGAPV 432
           A++              QGHVYGS GFHQV G  +
Sbjct: 137 AYESPSYAAAPGGIMMHQGHVYGSAGFHQVAGGAI 171


>gb|AFK49662.1| nuclear transcription factor Y subunit B12 [Medicago truncatula]
          Length = 190

 Score =  224 bits (571), Expect = 3e-56
 Identities = 121/154 (78%), Positives = 129/154 (83%), Gaps = 2/154 (1%)
 Frame = -2

Query: 896 ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 717
           E+SPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE
Sbjct: 22  EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 81

Query: 716 KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKTVAARDKDAMPIGAXXXXXS 537
           KRKTINGDDLLWAMTTLGFE+YVEPLK YLQRFRE+EGEKTV ARDKDA P G+     S
Sbjct: 82  KRKTINGDDLLWAMTTLGFEEYVEPLKGYLQRFREMEGEKTVGARDKDA-PQGSGSVTNS 140

Query: 536 AFDYAXXXXXXXXXXXXQGHVYGS--GGFHQVTG 441
           +++ +            QGHVYGS  GGFHQV G
Sbjct: 141 SYE-SGGYGGGGGVMMHQGHVYGSGGGGFHQVMG 173


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