BLASTX nr result

ID: Glycyrrhiza24_contig00010973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010973
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...   163   5e-38
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...   163   5e-38
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   163   5e-38
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   162   8e-38
gb|ACU24484.1| unknown [Glycine max]                                  160   3e-37

>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
           gi|355491414|gb|AES72617.1| RNA-binding protein
           [Medicago truncatula]
          Length = 273

 Score =  163 bits (412), Expect = 5e-38
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +2

Query: 35  VSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 214
           VSRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYA
Sbjct: 117 VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYA 176

Query: 215 IRKLDDTEFRNPWARSYI 268
           IRKLDDTEFRNPWARSYI
Sbjct: 177 IRKLDDTEFRNPWARSYI 194


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
           gi|355491413|gb|AES72616.1| RNA-binding protein
           [Medicago truncatula]
          Length = 272

 Score =  163 bits (412), Expect = 5e-38
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +2

Query: 35  VSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 214
           VSRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYA
Sbjct: 117 VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYA 176

Query: 215 IRKLDDTEFRNPWARSYI 268
           IRKLDDTEFRNPWARSYI
Sbjct: 177 IRKLDDTEFRNPWARSYI 194


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  163 bits (412), Expect = 5e-38
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +2

Query: 35  VSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 214
           VSRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYA
Sbjct: 224 VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYA 283

Query: 215 IRKLDDTEFRNPWARSYI 268
           IRKLDDTEFRNPWARSYI
Sbjct: 284 IRKLDDTEFRNPWARSYI 301


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  162 bits (410), Expect = 8e-38
 Identities = 75/78 (96%), Positives = 78/78 (100%)
 Frame = +2

Query: 35  VSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 214
           +SRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA
Sbjct: 116 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 175

Query: 215 IRKLDDTEFRNPWARSYI 268
           IRKLDDTEFRNPWAR+YI
Sbjct: 176 IRKLDDTEFRNPWARAYI 193


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  160 bits (405), Expect = 3e-37
 Identities = 74/78 (94%), Positives = 77/78 (98%)
 Frame = +2

Query: 35  VSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 214
           +SRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA
Sbjct: 110 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 169

Query: 215 IRKLDDTEFRNPWARSYI 268
           IRKLDD EFRNPWAR+YI
Sbjct: 170 IRKLDDAEFRNPWARAYI 187


Top