BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010937
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t...   592   e-167
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   583   e-164
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...   478   e-132
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   474   e-131
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              464   e-128

>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
            gi|217074186|gb|ACJ85453.1| unknown [Medicago truncatula]
            gi|355510788|gb|AES91930.1| Exosome complex exonuclease
            RRP4 [Medicago truncatula] gi|388516977|gb|AFK46550.1|
            unknown [Medicago truncatula]
          Length = 327

 Score =  592 bits (1525), Expect = e-167
 Identities = 296/327 (90%), Positives = 312/327 (95%)
 Frame = -1

Query: 1172 MREIQLPLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLN 993
            MR I L LSQTQK+RLQKALE LESLSSKVNSD+SVTIADSIPVNHEDGVLKGHGTADL+
Sbjct: 1    MRGIHLQLSQTQKLRLQKALEHLESLSSKVNSDSSVTIADSIPVNHEDGVLKGHGTADLD 60

Query: 992  GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAFLM 813
            GEVVATLCGVVERVNKLVYVR+LRSRYKPEVGDIVIGRV+EVAQKRWRLDINYSQNA+LM
Sbjct: 61   GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLM 120

Query: 812  LSSMNMPDGVQRRRTALDELNMRCIFEEKDVVCAEVRGFQHDGLHLQARSQKYGKLNSGQ 633
            LS+MNMPDGVQRRRTALDELNMRCIFEE DV+CAEVRGFQHDGLHLQARSQKYGKL++GQ
Sbjct: 121  LSAMNMPDGVQRRRTALDELNMRCIFEEADVICAEVRGFQHDGLHLQARSQKYGKLSTGQ 180

Query: 632  LLAVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHVEARDDMVEDQVNQSDPQVLL 453
            LL V PYLVKRQKQHFHHLEQYGIDLI+GCNGFIWVGEHVE RDDMVEDQVNQSDPQVL 
Sbjct: 181  LLTVTPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVNQSDPQVLT 240

Query: 452  PNKNSLSLEEQEKNHTTLETRKCICRAANAIRVLSTLGFIMTLEIIKGVIDLSLSLNLDI 273
            PNKNS+SLEEQEK +T LETRK ICRAANA+R LSTLGFI+T EIIKGVIDLSLS NLDI
Sbjct: 241  PNKNSVSLEEQEKKYTALETRKYICRAANAVRGLSTLGFIITSEIIKGVIDLSLSANLDI 300

Query: 272  HDMLGSEFCVLVAEREAERRSSNKKKR 192
            HDMLGSEFCVLVAE+EAERRSSNKKKR
Sbjct: 301  HDMLGSEFCVLVAEKEAERRSSNKKKR 327


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  583 bits (1504), Expect = e-164
 Identities = 292/327 (89%), Positives = 313/327 (95%)
 Frame = -1

Query: 1172 MREIQLPLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLN 993
            MREIQLPLSQTQKVRLQKALEQLESLS+KVNSDASV IADSI VNHEDGVLKGHGTADLN
Sbjct: 1    MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN 60

Query: 992  GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAFLM 813
            GEVVATLCGVVERVNKLVYVR+LRSRYKPEVGDIVIGRVVEVAQKRWRL+INY+Q+A L+
Sbjct: 61   GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL 120

Query: 812  LSSMNMPDGVQRRRTALDELNMRCIFEEKDVVCAEVRGFQHDGLHLQARSQKYGKLNSGQ 633
            LSSMNMPDGVQRRRTA+DELNMRCIFEE DVVCAEVRGFQHDGLHLQARS+KYGKLN GQ
Sbjct: 121  LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ 180

Query: 632  LLAVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHVEARDDMVEDQVNQSDPQVLL 453
            LL VPPYLVKRQKQHFHHLE++GIDLILGCNGFIWVGEHVEA+DDM+EDQV+QSD QVL 
Sbjct: 181  LLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLF 240

Query: 452  PNKNSLSLEEQEKNHTTLETRKCICRAANAIRVLSTLGFIMTLEIIKGVIDLSLSLNLDI 273
            PNKN +SLEEQEKN+T LETRK I RAANA+RVLSTLGF +TLEIIKG+IDLSLS+NLDI
Sbjct: 241  PNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLDI 300

Query: 272  HDMLGSEFCVLVAEREAERRSSNKKKR 192
            HDMLGSEFCVLVAE+EAERRSS KK+R
Sbjct: 301  HDMLGSEFCVLVAEKEAERRSSMKKRR 327


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score =  478 bits (1229), Expect = e-132
 Identities = 234/328 (71%), Positives = 283/328 (86%), Gaps = 2/328 (0%)
 Frame = -1

Query: 1172 MREIQLPLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLN 993
            M+ +QL L+ TQK+RL++A E+L+SLSSK NSDASV +AD+IP+N+EDGVLKGHGT DLN
Sbjct: 1    MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 992  GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAFLM 813
            GEVVA++CGVVERVNKL+YVR+LR+RYKPEVGDIV+GRV EVA KRWRLDINY Q+A LM
Sbjct: 61   GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120

Query: 812  LSSMNMPDGVQRRRTALDELNMRCIFEEKDVVCAEVRGFQHDGLHLQARSQKYGKLNSGQ 633
            LSSMN+PDG+QRRRTA+DELNMR IFEE DV+CAEVRG QHDGLHLQARSQKYGKL  GQ
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 632  LLAVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHVEAR--DDMVEDQVNQSDPQV 459
            LL V PYL+KR+KQHFHHLEQYGIDLILGCNGFIW+GEHV+ +  D M+EDQV++  P+ 
Sbjct: 181  LLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDK--PEQ 238

Query: 458  LLPNKNSLSLEEQEKNHTTLETRKCICRAANAIRVLSTLGFIMTLEIIKGVIDLSLSLNL 279
                       + ++ +T LETR+ ICR ANAIRVLSTLGFIMT+E+I  +++LS+SLN+
Sbjct: 239  KGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNI 298

Query: 278  DIHDMLGSEFCVLVAEREAERRSSNKKK 195
            D+H+MLGSEFCVL AE+E ERRSS+KK+
Sbjct: 299  DVHEMLGSEFCVLTAEKEVERRSSSKKR 326


>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  474 bits (1220), Expect = e-131
 Identities = 237/332 (71%), Positives = 287/332 (86%), Gaps = 5/332 (1%)
 Frame = -1

Query: 1172 MREIQLPLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLN 993
            MR  QL L+QTQK+RLQ+ALEQLESLSSK NS+ASV +AD+IPVN+EDGVLKGHGT DL+
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 992  GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAFLM 813
            GEVVATLCGVVERVNKLVY+R+LR+RYKPE GDI++GRV E+A KRWRLDIN+SQ+A LM
Sbjct: 61   GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 812  LSSMNMPDGVQRRRTALDELNMRCIFEEKDVVCAEVRGFQHDG-LHLQARSQKYGKLNSG 636
            LSSMN+PDG+QRRRTA+DELNMR IFEE D+VCAEVRGFQHDG LHLQARSQKYGKL  G
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 635  QLLAVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHVEARDDMVEDQVNQSDPQVL 456
            Q+L + PYLVKR+KQH H+LE++G+DLILGCNGFIWVGEHVEA+  ++EDQ ++++    
Sbjct: 181  QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQ--- 237

Query: 455  LPNKNS----LSLEEQEKNHTTLETRKCICRAANAIRVLSTLGFIMTLEIIKGVIDLSLS 288
            L  K+S    +SLEEQE+ +T+LETR+ ICR ANA+RVL+ LGF +T+E+IK  ++LS S
Sbjct: 238  LNTKSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSS 297

Query: 287  LNLDIHDMLGSEFCVLVAEREAERRSSNKKKR 192
            LNLDIH+MLGSEF VLVAE EA R+S   KK+
Sbjct: 298  LNLDIHEMLGSEFYVLVAEGEATRKSMFTKKK 329


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  464 bits (1194), Expect = e-128
 Identities = 229/328 (69%), Positives = 280/328 (85%), Gaps = 1/328 (0%)
 Frame = -1

Query: 1172 MREIQLPLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLN 993
            MR  QL L+QTQK+RLQ+ALEQLESLSSK NS+ASV +AD+IPVN+EDGVLKGHGT DL+
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 992  GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAFLM 813
            GEVVATLCGVVERVNKLVY+R+LR+RYKPE GDI++GRV E+A KRWRLDIN+SQ+A LM
Sbjct: 61   GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 812  LSSMNMPDGVQRRRTALDELNMRCIFEEKDVVCAEVRGFQHDG-LHLQARSQKYGKLNSG 636
            LSSMN+PDG+QRRRTA+DELNMR IFEE D+VCAEVRGFQHDG LHLQARSQKYGKL  G
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 635  QLLAVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHVEARDDMVEDQVNQSDPQVL 456
            Q+L + PYLVKR+KQH H+LE++G+DLILGCNGFIWVGEHVEA+  ++EDQ ++++    
Sbjct: 181  QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAE---- 236

Query: 455  LPNKNSLSLEEQEKNHTTLETRKCICRAANAIRVLSTLGFIMTLEIIKGVIDLSLSLNLD 276
                  L+ +  ++ +T+LETR+ ICR ANA+RVL+ LGF +T+E+IK  ++LS SLNLD
Sbjct: 237  -----QLNTKSSKRTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNLD 291

Query: 275  IHDMLGSEFCVLVAEREAERRSSNKKKR 192
            IH+MLGSEF VLVAE EA R+S   KK+
Sbjct: 292  IHEMLGSEFYVLVAEGEATRKSMFTKKK 319