BLASTX nr result

ID: Glycyrrhiza24_contig00010936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010936
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38914.1| unknown [Lotus japonicus]                              444   e-122
dbj|BAE71261.1| hypothetical protein [Trifolium pratense]             437   e-120
ref|XP_003611125.1| General transcription factor IIE subunit [Me...   435   e-119
ref|XP_003611128.1| General transcription factor IIE subunit [Me...   432   e-118
ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycin...   429   e-118

>gb|AFK38914.1| unknown [Lotus japonicus]
          Length = 278

 Score =  444 bits (1143), Expect = e-122
 Identities = 229/280 (81%), Positives = 245/280 (87%), Gaps = 4/280 (1%)
 Frame = -2

Query: 1297 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTP----PVAVKFSNDTERL 1130
            MALQ+KLDRFKRQQEKCQ                Q   R+PTP    PV VKFSNDTERL
Sbjct: 1    MALQEKLDRFKRQQEKCQSTLTSIASTKASAT--QNGRRTPTPTPPAPVPVKFSNDTERL 58

Query: 1129 QHINSIRKAPVGAQMKRVIDLLFETRQAFTLEQINEACYVDMKANKDVFESMRKNPKVKY 950
            QHINSIRKAPVGAQMKRVI LLFE+RQAFT+EQINEACYVDM+ANKDVF+SMRKNPKVK+
Sbjct: 59   QHINSIRKAPVGAQMKRVIALLFESRQAFTMEQINEACYVDMRANKDVFDSMRKNPKVKF 118

Query: 949  DGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGREIWLLSN 770
            DGE+FSYKSKHD+RDK +LLFLIRKFPEGIAVIDLKD+YPTV+EDLQALKA REIWLLSN
Sbjct: 119  DGEKFSYKSKHDLRDKKELLFLIRKFPEGIAVIDLKDSYPTVLEDLQALKAAREIWLLSN 178

Query: 769  FDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRSA 590
            FDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATNTAKRRSA
Sbjct: 179  FDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSA 238

Query: 589  AQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 470
            AQMQGISS       KNEI+KRTKLTNAHLPELFQNL +S
Sbjct: 239  AQMQGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKDS 278


>dbj|BAE71261.1| hypothetical protein [Trifolium pratense]
          Length = 270

 Score =  437 bits (1123), Expect = e-120
 Identities = 225/276 (81%), Positives = 238/276 (86%)
 Frame = -2

Query: 1297 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1118
            MALQ KLDRFK+QQEKC                   +   P+P V VKFSNDTERLQHIN
Sbjct: 1    MALQGKLDRFKKQQEKCASTLSSIAASKAA------SSAVPSPLVPVKFSNDTERLQHIN 54

Query: 1117 SIRKAPVGAQMKRVIDLLFETRQAFTLEQINEACYVDMKANKDVFESMRKNPKVKYDGER 938
            SIRKAPVGAQMKRVIDLLFETRQA TLEQINE C+VDMKANKDVF++MRKNPKV+YDGER
Sbjct: 55   SIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGER 114

Query: 937  FSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGREIWLLSNFDSQ 758
            FSYKSKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQALKAGREIWLLSNFDSQ
Sbjct: 115  FSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKAGREIWLLSNFDSQ 174

Query: 757  EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRSAAQMQ 578
            EDIAYPNDPKVPIKVDDDLK LFRGIELPRDMLDIE+DLQKNGMKPATNTAKRRSAAQM+
Sbjct: 175  EDIAYPNDPKVPIKVDDDLKLLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQME 234

Query: 577  GISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 470
            GISS       KNEI+KRTKLTNAHLPELFQNL NS
Sbjct: 235  GISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKNS 270


>ref|XP_003611125.1| General transcription factor IIE subunit [Medicago truncatula]
            gi|355512460|gb|AES94083.1| General transcription factor
            IIE subunit [Medicago truncatula]
            gi|388501522|gb|AFK38827.1| unknown [Medicago truncatula]
          Length = 270

 Score =  435 bits (1119), Expect = e-119
 Identities = 225/276 (81%), Positives = 238/276 (86%)
 Frame = -2

Query: 1297 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1118
            MALQ KLDRFK+QQEKCQ                 PN  +P     VKFS DTERLQHIN
Sbjct: 1    MALQGKLDRFKKQQEKCQSTLSSIAANKAVSASV-PNALAP-----VKFSTDTERLQHIN 54

Query: 1117 SIRKAPVGAQMKRVIDLLFETRQAFTLEQINEACYVDMKANKDVFESMRKNPKVKYDGER 938
            SIRKAPVGAQMKRVIDLLFETRQA TLEQINE C+VDMKANKDVF++MRKNPKV+YDGER
Sbjct: 55   SIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGER 114

Query: 937  FSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGREIWLLSNFDSQ 758
            FSYKSKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQALK GREIWLLSNFDSQ
Sbjct: 115  FSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQ 174

Query: 757  EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRSAAQMQ 578
            EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATNTAKRRSAAQM+
Sbjct: 175  EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQME 234

Query: 577  GISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 470
            GISS       KNEI+KRTKLTNAHLPELFQNLNNS
Sbjct: 235  GISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS 270


>ref|XP_003611128.1| General transcription factor IIE subunit [Medicago truncatula]
            gi|355512463|gb|AES94086.1| General transcription factor
            IIE subunit [Medicago truncatula]
          Length = 307

 Score =  432 bits (1110), Expect = e-118
 Identities = 227/284 (79%), Positives = 240/284 (84%), Gaps = 5/284 (1%)
 Frame = -2

Query: 1306 SIKMALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQ 1127
            SI MALQ KLDRFK+QQEKCQ                 PN  +P     VKFS DTERLQ
Sbjct: 30   SITMALQGKLDRFKKQQEKCQSTLSSIAANKAVSASV-PNALAP-----VKFSTDTERLQ 83

Query: 1126 HINSIRKAPVGAQMKRVIDLLFETRQAFTLEQINEACYVDMKANKDVFESMRKNPKVKYD 947
            HINSIRKAPVGAQMKRVIDLLFETRQA TLEQINE C+VDMKANKDVF++MRKNPKV+YD
Sbjct: 84   HINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYD 143

Query: 946  GERFSYK-----SKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGREIW 782
            GERFSYK     SKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQALK GREIW
Sbjct: 144  GERFSYKVTFILSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIW 203

Query: 781  LLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAK 602
            LLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATNTAK
Sbjct: 204  LLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAK 263

Query: 601  RRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 470
            RRSAAQM+GISS       KNEI+KRTKLTNAHLPELFQNLNNS
Sbjct: 264  RRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS 307


>ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
            gi|255639642|gb|ACU20115.1| unknown [Glycine max]
          Length = 257

 Score =  429 bits (1104), Expect = e-118
 Identities = 220/273 (80%), Positives = 236/273 (86%)
 Frame = -2

Query: 1297 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1118
            MA Q+K +RFKRQ EK                     GR+P P   +KFSNDTERLQH+N
Sbjct: 1    MAFQEKQNRFKRQPEKSASASQY--------------GRTPAP---IKFSNDTERLQHVN 43

Query: 1117 SIRKAPVGAQMKRVIDLLFETRQAFTLEQINEACYVDMKANKDVFESMRKNPKVKYDGER 938
            SIRKAPVGAQMKRVIDLLFETR+A T+EQINEACYVDM+ANKDVFESMRKNPKVKYDGER
Sbjct: 44   SIRKAPVGAQMKRVIDLLFETRKALTIEQINEACYVDMRANKDVFESMRKNPKVKYDGER 103

Query: 937  FSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGREIWLLSNFDSQ 758
            FSYKSKHDVRDK+QLLFL+RKFPEGIAV+DLKD+YPTVMEDLQALKA REIWLLSNFDSQ
Sbjct: 104  FSYKSKHDVRDKNQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKAAREIWLLSNFDSQ 163

Query: 757  EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRSAAQMQ 578
            EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATNTAKRRSAAQM+
Sbjct: 164  EDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQME 223

Query: 577  GISSXXXXXXXKNEISKRTKLTNAHLPELFQNL 479
            GISS       KNEI+KRTKLTNAHLPELFQNL
Sbjct: 224  GISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 256