BLASTX nr result

ID: Glycyrrhiza24_contig00010887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010887
         (2427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   839   0.0  
ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   806   0.0  
ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   780   0.0  
ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   763   0.0  
ref|XP_003613674.1| F-box/kelch-repeat protein SKIP11 [Medicago ...   738   0.0  

>ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  839 bits (2168), Expect = 0.0
 Identities = 425/542 (78%), Positives = 452/542 (83%), Gaps = 13/542 (2%)
 Frame = +2

Query: 317  MLDGRSCVVPRLFSGSCQAENNWSFMKYLPDLDIKSSKRALDVDGEDETQPRKVNRRLD- 493
            ML+GRSCVVPRLF  SCQA+N WSFM YLPDLDIK+ KR LD DGE+E QPRKVNRR+D 
Sbjct: 1    MLEGRSCVVPRLFPSSCQADNKWSFMTYLPDLDIKNGKRPLDTDGEEEPQPRKVNRRVDS 60

Query: 494  -------RISIQPQSCHAEDSVVPQLDEDDQGKDCEPPLSNCQRVEKDGAFSVQLSAEQA 652
                   R   Q QSCHA+DSVVPQ+D+D + KDC   LSN QRVEK  AFS QL  E+ 
Sbjct: 61   RHHGETTRFLFQKQSCHADDSVVPQMDQDRR-KDCVL-LSNWQRVEKADAFSAQLLDERE 118

Query: 653  QHRPGDSSMKSGGDHXXXXXXXXXXXXXXXXVVHQSDEQQFE----GVLLNS-NXXXXXX 817
            QHR GDS + S  D                  V QSDEQ+ E    G LL++ +      
Sbjct: 119  QHRAGDSLVVST-DLQSNKKEEDQLEDSSDSGVQQSDEQKMEQEVEGDLLDAGDQQPPDD 177

Query: 818  XXXXXXXXXXXXXXLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRR 997
                          LLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRN IRSGELY WRR
Sbjct: 178  QEEHHGGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNTIRSGELYRWRR 237

Query: 998  LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 1177
            LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE
Sbjct: 238  LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 297

Query: 1178 LRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAELYNSE 1357
            +RSHVIYRYSLLTNSW+SGMRMNAPRCLFGSASLGEIAILAGGCD DGHILDSAELYNSE
Sbjct: 298  MRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDLDGHILDSAELYNSE 357

Query: 1358 NQTWEPLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWTEIPNMS 1537
            NQTWE LPSMNKPRKMCSGVFMDGKFYVIGGIGG++SKLLTCGEEYN+QTRTWTEIPNMS
Sbjct: 358  NQTWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGKDSKLLTCGEEYNIQTRTWTEIPNMS 417

Query: 1538 PGRSTRGSEMPATAEAPPLVAVVNNELYAADYADKEVKKYDKDRKLWVTIGRLPERAVSM 1717
            PGRS RG+EMPATAEAPPLVAVVN+ELYAADYAD EVKKYDK+R++WVTIGRLPERAVSM
Sbjct: 418  PGRSARGAEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERRVWVTIGRLPERAVSM 477

Query: 1718 NGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVM 1897
            NGWGLAFRACG+ LIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARK+SGNFVYNCAVM
Sbjct: 478  NGWGLAFRACGDMLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVM 537

Query: 1898 GC 1903
            GC
Sbjct: 538  GC 539


>ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  806 bits (2083), Expect = 0.0
 Identities = 413/542 (76%), Positives = 440/542 (81%), Gaps = 13/542 (2%)
 Frame = +2

Query: 317  MLDGRSCVVPRLFSGSCQAENNWSFMKYLPDLDIKSSKRALDVDGEDETQPRKVNRRLD- 493
            ML+GRSCVVPRLF  SCQA++ W FM YLPDLDIK+ KR LD DGE+E Q RK NRR+D 
Sbjct: 1    MLEGRSCVVPRLFPSSCQADDKWPFMTYLPDLDIKNGKRPLDPDGEEEPQSRKANRRVDS 60

Query: 494  -------RISIQPQSCHAEDSVVPQLDEDDQGKDCEPPLSNCQRVEKDGAFSVQLSAEQA 652
                   +   Q QSCHA+DSVVPQ+D D + K CE  LSN QRVEK  AFS QL  E+ 
Sbjct: 61   HHQGKTTQFLFQQQSCHADDSVVPQMDWDWR-KGCES-LSNWQRVEKTEAFSAQLLDERE 118

Query: 653  QHRPGDSSMKSGGDHXXXXXXXXXXXXXXXXVVHQSDEQQFE----GVLLN-SNXXXXXX 817
             H  GDS + S  D                  V QS+EQQ E    G LL+ S+      
Sbjct: 119  PHCTGDSLVVST-DLQSNKQEEDQSEDSSDSGVQQSNEQQMEQEVEGDLLDASDQQPLED 177

Query: 818  XXXXXXXXXXXXXXLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRR 997
                          LLP MN D+SIACLS CSRSDYGSLASLNRSF N IRSGELY WRR
Sbjct: 178  QEEHHGGDSSDSSSLLPCMNWDNSIACLSHCSRSDYGSLASLNRSFWNTIRSGELYRWRR 237

Query: 998  LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 1177
            LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE
Sbjct: 238  LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 297

Query: 1178 LRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAELYNSE 1357
            +RSHVIYRYSLLTNSW+SGMRMNAPRCLFGSASLGEIAILAGGCD DGHI+DSAELYNSE
Sbjct: 298  MRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDLDGHIMDSAELYNSE 357

Query: 1358 NQTWEPLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWTEIPNMS 1537
            NQTW  LPSMNKPRKMCSGVFMDGKFYVIGGIGG++SKLLTCGEEYNLQTRTWTEIPNMS
Sbjct: 358  NQTWVLLPSMNKPRKMCSGVFMDGKFYVIGGIGGKDSKLLTCGEEYNLQTRTWTEIPNMS 417

Query: 1538 PGRSTRGSEMPATAEAPPLVAVVNNELYAADYADKEVKKYDKDRKLWVTIGRLPERAVSM 1717
            PGRS RG+EMPATAEAPPLVAVVNNELYAADYAD EVKKYDK+R++WVTIGRLPERAVSM
Sbjct: 418  PGRSARGAEMPATAEAPPLVAVVNNELYAADYADTEVKKYDKERRVWVTIGRLPERAVSM 477

Query: 1718 NGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVM 1897
            NGWGLAFRACG+ LIVI GPRTHGEGFIELNSWVPSEGPPQWNLLARK+SGNFVYNCAVM
Sbjct: 478  NGWGLAFRACGDMLIVISGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVM 537

Query: 1898 GC 1903
            GC
Sbjct: 538  GC 539


>ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like isoform 1 [Glycine
            max] gi|356498228|ref|XP_003517955.1| PREDICTED:
            F-box/kelch-repeat protein SKIP11-like isoform 2 [Glycine
            max]
          Length = 537

 Score =  780 bits (2015), Expect = 0.0
 Identities = 398/544 (73%), Positives = 436/544 (80%), Gaps = 15/544 (2%)
 Frame = +2

Query: 317  MLDGRSCVVPRLFSGSCQAENNWSFMKYLPDLDIKSSKRALDVDGEDET---QPRKVNRR 487
            MLDGRSCVVPR+FSG+CQAEN+WS+MK L +LDIK+ KR +++D  +E    QPRK  ++
Sbjct: 1    MLDGRSCVVPRMFSGTCQAENDWSYMKCLLELDIKNGKRPMEIDDVEEDEPHQPRKCTKK 60

Query: 488  LD--------RISIQPQSCHAEDSVVPQLDEDDQGKDCEPPLSNCQRV-EKDGAFSVQLS 640
            LD        RIS Q QS  A+DSVVP +D++        PLS CQ V E+DGA + QL 
Sbjct: 61   LDSCHRVEMARISFQRQSIEAKDSVVPPMDQETI-----EPLSVCQGVVEEDGALTDQLL 115

Query: 641  AEQAQHRPGDSSMKSGGDHXXXXXXXXXXXXXXXXVVHQSDEQQFEGV---LLNSNXXXX 811
             E+ Q    D  +   GDH                    SDE Q +     LLNS+    
Sbjct: 116  DEKEQEV--DGYLMDFGDHQSDKQQQAQTGDSSDFGAQLSDEDQLQHDDENLLNSSEQQS 173

Query: 812  XXXXXXXXXXXXXXXXLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTW 991
                            LLPRMNRDSSIACLSRCSRSDYGSLASLNRSF NIIRSGELY W
Sbjct: 174  EGQQQHHGGDSSDSSSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFWNIIRSGELYQW 233

Query: 992  RRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFG 1171
            RRLNGI+EHWIYFSCALLEWEAYDPIR+RWMHLPRMASNECFMCSDKESLAVGTELLVFG
Sbjct: 234  RRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFG 293

Query: 1172 RELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAELYN 1351
            RELRSHV YRYSLLTNSW+SG RMNAPRCLFGSASLGEIAILAGGCDS+GHILDSAELYN
Sbjct: 294  RELRSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYN 353

Query: 1352 SENQTWEPLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWTEIPN 1531
            SE QTWE LP M KPRKMCSGVFMDGKFYVIGGIGG +SKLLTCGEEYNLQTRTWTEIP+
Sbjct: 354  SETQTWETLPCMKKPRKMCSGVFMDGKFYVIGGIGGCDSKLLTCGEEYNLQTRTWTEIPS 413

Query: 1532 MSPGRSTRGSEMPATAEAPPLVAVVNNELYAADYADKEVKKYDKDRKLWVTIGRLPERAV 1711
            MSPGRS+RG EMPATAEAPPLVAVVN+ELYAADYAD EVKKYDK+RK+W+TIGRLPERAV
Sbjct: 414  MSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERKVWLTIGRLPERAV 473

Query: 1712 SMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCA 1891
            SMNGWGLAFRACG++LIVIGGPRTHGEGFIELNSWVPSEGPP+W+LLARK+SGNFVYNCA
Sbjct: 474  SMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCA 533

Query: 1892 VMGC 1903
            VMGC
Sbjct: 534  VMGC 537


>ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  763 bits (1970), Expect = 0.0
 Identities = 392/546 (71%), Positives = 427/546 (78%), Gaps = 17/546 (3%)
 Frame = +2

Query: 317  MLDGRSCVVPRLFSGSCQAENNWSFMKYLPDLDIKSSKRALDVDGEDET---QPRKVNRR 487
            MLDGRSCVVPRLFSG+CQAEN WS+MK L +LDIK+ KR + +D  +E    QPRK  ++
Sbjct: 1    MLDGRSCVVPRLFSGTCQAENEWSYMKCLLELDIKNGKRPMGIDDVEEDEPHQPRKCTKK 60

Query: 488  LD--------RISIQPQSCHAEDSVV-PQLDEDDQGKDCEPPLSNCQRVE-KDGAFSVQL 637
            LD        RIS Q QS  A+DSVV P LD++        PLS CQ V  ++GA + +L
Sbjct: 61   LDSCHRVEMARISFQRQSIEAKDSVVVPPLDQETI-----EPLSVCQGVVGEEGALTDRL 115

Query: 638  SAEQAQHRPGDSSMKSGGDHXXXXXXXXXXXXXXXXVVHQSDEQQFEG----VLLNSNXX 805
              E+     GD  +   GDH                 V   DE Q +     + L+    
Sbjct: 116  LCEKEHE--GDGDLMDFGDHQSDKQQQAQPGDLSDFGVRLFDEDQLQHDDNLLNLSEQQS 173

Query: 806  XXXXXXXXXXXXXXXXXXLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELY 985
                              LLPRMNRDSSI CLSRCSRSDYGSLASLNRSFRNIIRSGELY
Sbjct: 174  EGRQQQHHHGGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELY 233

Query: 986  TWRRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLV 1165
             WRRLNGI+EHWIYFSCALLEWEAYDPIR+RWMHLPRMASNECFMCSDKESLA GTELLV
Sbjct: 234  QWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAAGTELLV 293

Query: 1166 FGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAEL 1345
            FGRELRSHV YRYSLLTNSW+SG RMNAPRCLFGSASLGEIAILAGGCDS+GHILDSAEL
Sbjct: 294  FGRELRSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAEL 353

Query: 1346 YNSENQTWEPLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWTEI 1525
            YNSE QTWE LP M KPRKM SGVFMDGKFYVIGGIGG +SKLLTCGEEYNLQTRTWTEI
Sbjct: 354  YNSETQTWETLPRMKKPRKMSSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEI 413

Query: 1526 PNMSPGRSTRGSEMPATAEAPPLVAVVNNELYAADYADKEVKKYDKDRKLWVTIGRLPER 1705
            PNMSPGRS+RG EMPATAEAPPLVAVVN+ELYAADYAD EVKKYDK+R +W TIGRLPER
Sbjct: 414  PNMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERNVWFTIGRLPER 473

Query: 1706 AVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYN 1885
            AVSMNGWGLAFRACG++LIVIGGPRTHGEGFIELNSWVPSEGPP+W+LLARK+SGNFVYN
Sbjct: 474  AVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYN 533

Query: 1886 CAVMGC 1903
            CAVMGC
Sbjct: 534  CAVMGC 539


>ref|XP_003613674.1| F-box/kelch-repeat protein SKIP11 [Medicago truncatula]
            gi|355515009|gb|AES96632.1| F-box/kelch-repeat protein
            SKIP11 [Medicago truncatula]
          Length = 480

 Score =  738 bits (1906), Expect = 0.0
 Identities = 373/533 (69%), Positives = 414/533 (77%), Gaps = 5/533 (0%)
 Frame = +2

Query: 320  LDGRSCVVPRLFSGSCQAENNWSFMKYLPDLDIKSSKRALDVDG-EDETQPRKVNRRLDR 496
            L GR CVV RLF  +C+ EN+WS+MKY+ DLDIK+ KR + +D  EDE  PRK  + L+ 
Sbjct: 6    LFGRCCVVSRLFCSTCETENDWSYMKYMLDLDIKNGKRPMKIDSAEDEHHPRKCTKMLES 65

Query: 497  ISIQPQSC----HAEDSVVPQLDEDDQGKDCEPPLSNCQRVEKDGAFSVQLSAEQAQHRP 664
              I    C    H +D+V+P+ D+         PL+ CQ V  DG  S+  S        
Sbjct: 66   CHIVETVCISLQHPKDAVLPETDQK-----INEPLNVCQGVH-DGGDSIDSS-------- 111

Query: 665  GDSSMKSGGDHXXXXXXXXXXXXXXXXVVHQSDEQQFEGVLLNSNXXXXXXXXXXXXXXX 844
             DS                         + QSDE+Q  G   +S                
Sbjct: 112  -DSG------------------------IQQSDEEQHAGDSSDSGS-------------- 132

Query: 845  XXXXXLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRLNGIIEHWI 1024
                 LLPRMNRDSSI CLSRCSRSDYGSLASLNRSFR IIR+GE+Y WRRLNGI+EHW+
Sbjct: 133  -----LLPRMNRDSSIVCLSRCSRSDYGSLASLNRSFREIIRNGEVYRWRRLNGIMEHWV 187

Query: 1025 YFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRY 1204
            YFSCALLEWEAYDPIR+RWMHLPRMASN+CFMCSDKESLAVGTELLVFGRELRSHVIYRY
Sbjct: 188  YFSCALLEWEAYDPIRQRWMHLPRMASNDCFMCSDKESLAVGTELLVFGRELRSHVIYRY 247

Query: 1205 SLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAELYNSENQTWEPLPS 1384
            SLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDS+G ILDSAELYNSE QT+E LPS
Sbjct: 248  SLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFELLPS 307

Query: 1385 MNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWTEIPNMSPGRSTRGSE 1564
            MNKPRKMCSGVFMDGKFYV+GGIGGR+SKLLTCGEEYNLQTRTWT+IP+MSPGRS+RGSE
Sbjct: 308  MNKPRKMCSGVFMDGKFYVVGGIGGRDSKLLTCGEEYNLQTRTWTDIPDMSPGRSSRGSE 367

Query: 1565 MPATAEAPPLVAVVNNELYAADYADKEVKKYDKDRKLWVTIGRLPERAVSMNGWGLAFRA 1744
            MPA  EAPPL+AVV+NELYAADYAD EVK+YDK+RKLW+T+GRLPERA+SMNGWGLAFRA
Sbjct: 368  MPAATEAPPLIAVVDNELYAADYADMEVKRYDKERKLWITVGRLPERAMSMNGWGLAFRA 427

Query: 1745 CGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC 1903
            CGN LIVIGGPRTHGEGFIELNSWVPSEGPPQW LLARK+SGNFVYNCAVMGC
Sbjct: 428  CGNMLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMGC 480


Top