BLASTX nr result

ID: Glycyrrhiza24_contig00010863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010863
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555469.1| PREDICTED: putative F-box protein At1g47765-...   174   4e-41
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...   140   6e-31
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...   132   1e-28
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...   123   8e-26

>ref|XP_003555469.1| PREDICTED: putative F-box protein At1g47765-like [Glycine max]
          Length = 193

 Score =  174 bits (441), Expect = 4e-41
 Identities = 106/255 (41%), Positives = 136/255 (53%)
 Frame = -3

Query: 1180 PEVIVVEILQRLPVKSLVKCTRVCKSWRSIITNPSFIXXXXXXXXXXXXXXXXXLCNELA 1001
            P+ I+VEI +RLP KS+V+C+ VCK WRS++TN SFI                       
Sbjct: 8    PDEILVEIFRRLPSKSIVRCSAVCKLWRSLVTNESFISLHH------------------- 48

Query: 1000 PPNLIDYSLRHDDPFLTDXXXXXXXXXXXXXPEFSVVGISRGLVCLTAGEHSLTLLICNP 821
                     R  DPFLT                         L   +  +H         
Sbjct: 49   ---------RRRDPFLT-------------------------LRLPSFPDHD-------- 66

Query: 820  CIRRFIRLPEPLDYPSLYNASVAFGFDSRNDDFKVVRISCMLDDYSHGLTVPKVGIYSLA 641
             IRR++ LP P DYP  +++ +A GFDS N D+KV+RISC++DD S GL+ P   +Y LA
Sbjct: 67   -IRRYVYLPTPHDYPCYHHSYIALGFDSSNCDYKVIRISCIVDDESFGLSAPLFELYPLA 125

Query: 640  SGFWRKNLASAPVCTLCFVGRDAPYGFVHGLVHWGAKRRVNNDDPHAWYHFVLSYSFEDE 461
            +G WR   + APV   C+V  DAP GF  GLVHW AKR V      AWY+FVLS+  EDE
Sbjct: 126  TGSWRILDSIAPV---CYVAGDAPDGFEDGLVHWVAKRYVTG----AWYYFVLSFRLEDE 178

Query: 460  VFGEVLLPETLAHVS 416
            +FGEV+LPE+LAHVS
Sbjct: 179  MFGEVMLPESLAHVS 193


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  140 bits (353), Expect = 6e-31
 Identities = 122/398 (30%), Positives = 184/398 (46%), Gaps = 2/398 (0%)
 Frame = -3

Query: 1195 MWDSLPEVIVVEILQRLPVKSLVKCTRVCKSWRSIITNPSFIXXXXXXXXXXXXXXXXXL 1016
            M D L E ++ EIL +LP+KSL++CT +CKSW S+I +P+FI                 L
Sbjct: 1    MSDYLSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDRQNLFL 60

Query: 1015 CNELAPPNLIDYSLRHDDPFLTDXXXXXXXXXXXXXPEFSVVGISRGLVCLTAGEHSL-- 842
                +      YSLR D+    +               F V+G S GL+CL     SL  
Sbjct: 61   LRLCSREREEQYSLRLDNQDFNEHMQLHFPFKSSESY-FHVIGSSNGLICLANIFQSLIV 119

Query: 841  TLLICNPCIRRFIRLPEPLDYPSLYNASVAFGFDSRNDDFKVVRISCMLDDYSHGLTVPK 662
            + ++ NP I++++ + +P     +Y + V FG+DSR +D+K++R+             P+
Sbjct: 120  SFILWNPLIQKYM-IVKPRILGPVY-SFVGFGYDSRANDYKLIRMVSFQKSKFRSENFPE 177

Query: 661  VGIYSLASGFWRKNLASAPVCTLCFVGRDAPYGFVHGLVHWGAKRRVNNDDPHAWYHFVL 482
            + +YSL  G WR    + P+       +     F++G+VHW A R    D      + VL
Sbjct: 178  IALYSLNEGSWRGIRQTGPL--RYDTDQRVSSAFLNGVVHWIAYRA---DQHEGVSNVVL 232

Query: 481  SYSFEDEVFGEVLLPETLAHVSSYAXXXXXXXGNRNGKGLPLTVYRVSGGLPSYGDIWVM 302
             +   DE+F E+ LP  LA+V                K   ++V + S        IWVM
Sbjct: 233  GFDMSDEIFLEIALPSCLANVRPSCLSLMVY------KESSISVCQASFLSSVQFHIWVM 286

Query: 301  KEYGVVGSWTKVFSFDLRGFWLEAPSLGITVTGVTAPPSAMCVRNGGEVLLLMDVAGKGC 122
            KEYGVV SWTK+         L A   G+        P A+ +R   E LL+     +G 
Sbjct: 287  KEYGVVESWTKLV------LTLAAQGEGV--------PRALGIRK--EELLM--EKKRGW 328

Query: 121  LYSLDVERKTFTDLGIGGEGYTWYLYSGYYTETLVLLN 8
            + S D+E +   DL I GE    ++  G Y E+LVLL+
Sbjct: 329  IVSGDLESQLVRDLRIWGEPSRTFI--GSYLESLVLLD 364


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
            gi|449531147|ref|XP_004172549.1| PREDICTED: F-box protein
            CPR30-like [Cucumis sativus]
          Length = 379

 Score =  132 bits (333), Expect = 1e-28
 Identities = 119/401 (29%), Positives = 172/401 (42%), Gaps = 8/401 (1%)
 Frame = -3

Query: 1183 LPEVIVVEILQRLPVKSLVKCTRVCKSWRSIITNPSFI---XXXXXXXXXXXXXXXXXLC 1013
            LP  ++  I   LP K+L+ C+ V KSWRS++ NP FI                      
Sbjct: 5    LPHEVLFNIFLNLPPKTLILCSCVSKSWRSVVANPIFISTHRNQSLTCNRKLLILGRYYY 64

Query: 1012 NELAPPNLIDYSLRHDDPFLTDXXXXXXXXXXXXXPEFSVVGISRGLVCLTAGEHSLTLL 833
            N   P   + YSL H D    D              +  +VG+S GLVC       L LL
Sbjct: 65   NRTEPK--VRYSL-HFDTDTLDLYQELKFPFPNSNGDLKIVGVSNGLVCFL----GLDLL 117

Query: 832  ICNPCIRRFIRLPEPLDYPSLYNA----SVAFGFDSRNDDFKVVRISCMLDDYSHGL-TV 668
            + NP I+R + +P   D  + Y      ++ FGFDS  DD KVVR+    D         
Sbjct: 118  LWNPSIQRVVDVPRTSDTVTTYGVPDFYALGFGFDSCADDHKVVRLLYFADKVPFSYKRS 177

Query: 667  PKVGIYSLASGFWRKNLASAPVCTLCFVGRDAPYGFVHGLVHWGAKRRVNNDDPHAWYHF 488
            PKV +Y + +G WR     AP C +  V       FV+G VHW A R +       +  F
Sbjct: 178  PKVELYEVGTGSWRAINNKAPRCEI--VRSGWTQAFVNGAVHWIAYREIGT----GYRCF 231

Query: 487  VLSYSFEDEVFGEVLLPETLAHVSSYAXXXXXXXGNRNGKGLPLTVYRVSGGLPSYGDIW 308
            +L +    E F  + LP+ LA+ S Y            G  L +T+            +W
Sbjct: 232  ILRFDIVKECFSIITLPDCLANSSPYDLKVTVL-----GGALSITLCGWYCFETYMSSVW 286

Query: 307  VMKEYGVVGSWTKVFSFDLRGFWLEAPSLGITVTGVTAPPSAMCVRNGGEVLLLMDVAGK 128
            V+K+Y +  SWTK+ S          PS  + +         + +R  GE +L+   +G+
Sbjct: 287  VLKKYDIPESWTKLIS--------SGPSQELGM--------VLGLRENGE-MLMESKSGE 329

Query: 127  GCLYSLDVERKTFTDLGIGGEGYTWYLYSGYYTETLVLLND 5
              LY+  +  +   +LGI G   T+YL S  Y E+L LLN+
Sbjct: 330  VVLYNPYI--RLMKNLGIYGAEGTFYLDS--YVESLALLNE 366


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
            gi|223533120|gb|EEF34878.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 379

 Score =  132 bits (333), Expect = 1e-28
 Identities = 118/405 (29%), Positives = 174/405 (42%), Gaps = 10/405 (2%)
 Frame = -3

Query: 1195 MWDSLPEVIVVEILQRLPVKSLVKCTRVCKSWRSIITNPSFIXXXXXXXXXXXXXXXXXL 1016
            M D +P+ ++++I  RLPVK L++C  +CK+W S+I+N +FI                 L
Sbjct: 1    MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLIL 60

Query: 1015 CNELAPPNLIDYSLRHDDPFLTDXXXXXXXXXXXXXPEFSVVGISRGLVCLTAGEHSL-- 842
             +         ++L  DD  +                 F +VG   G++CLT     +  
Sbjct: 61   RHYSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNHSHILK 120

Query: 841  TLLICNPCIRRFIRLPEPLDYPSLYNASVAFGFDSRNDDFKVVRISCMLDDYSHGLTVPK 662
             +++ NP I   + LP       + N  + FGFDSR +D+KV+RI     +    +  P+
Sbjct: 121  RIVLWNPSIGLSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSLMVPPE 180

Query: 661  VGIYSLASGFWR-KNLASAPVCTLCFVGRDAPYGFVHGLVHWGAKRRVNNDDPHAWYHFV 485
            V I+ L+ G WR  N AS P      V + +    + G +HW     V    P      +
Sbjct: 181  VEIFELSRGTWRINNSASVPAYD---VSKYSSQIVLEGAIHW-----VGYYSPREL--TI 230

Query: 484  LSYSFEDEVFGEVLLPE-----TLAHVSSYAXXXXXXXGNRNGKGLPLTVYRVSGGLPSY 320
              Y   DE F E  +P+      L H+S                 L +  Y+  G    Y
Sbjct: 231  AVYVVHDEEFKEFRMPDEISGTALQHLSVMLCCQL----------LSIIQYKKRGSRLCY 280

Query: 319  GD--IWVMKEYGVVGSWTKVFSFDLRGFWLEAPSLGITVTGVTAPPSAMCVRNGGEVLLL 146
                IWVM EYGV  SWTK+F+              + VTG       + +RN  EVLL 
Sbjct: 281  ESCCIWVMNEYGVHDSWTKLFN--------------VVVTGGIG--KVLGLRNNVEVLL- 323

Query: 145  MDVAGKGCLYSLDVERKTFTDLGIGGEGYTWYLYSGYYTETLVLL 11
              V G+G L S D   +    LGI GE  ++  Y+G Y E+LVLL
Sbjct: 324  --VGGQGELISYDPWYQRSKSLGISGESCSF--YAGIYMESLVLL 364


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
            gi|449511918|ref|XP_004164088.1| PREDICTED: F-box protein
            CPR30-like [Cucumis sativus]
          Length = 391

 Score =  123 bits (309), Expect = 8e-26
 Identities = 120/411 (29%), Positives = 178/411 (43%), Gaps = 14/411 (3%)
 Frame = -3

Query: 1195 MWDSLPEVIVVEILQRLPVKSLVKCTRVCKSWRSIITNPSFIXXXXXXXXXXXXXXXXXL 1016
            M DSLP  I+  I  +LP ++L+ CT V K WRS+IT+P+F+                 L
Sbjct: 1    MLDSLPPEILFYIFLKLPSRTLILCTCVSKPWRSLITDPAFLLSHLNQSNTNHHRNRNRL 60

Query: 1015 -----CNELAPPNLIDYSLRHDDPFLTDXXXXXXXXXXXXXPEFSVVGISRGLVCLTAGE 851
                 C   A      YSL  D   L                 F +VG S GL+CL    
Sbjct: 61   LLLRRCYSTATKKAERYSLHFDSDTL-GIYKELKLPHVNWNQSFKLVGSSNGLLCLLGQN 119

Query: 850  HSLTLLICNPCIRRFIRLPEPLD----YPSLYNASVAFGFDSRNDDFKVVRISCMLDD-- 689
                +   NP I+RF+ LP P D    Y S Y  ++ FGFDSR +DFK+VR+  +     
Sbjct: 120  ----IFFWNPSIQRFLALPWPSDIFTVYGSPYKYALGFGFDSRANDFKLVRLVYIEGGPP 175

Query: 688  -YSHGLTVPKVGIYSLASGFWRKNLASAPVCTLCFVGRDAPYG--FVHGLVHWGAKRRVN 518
             Y + L  P+V +Y L++G WR+   SAP    C+    + +   F++  VHW A  R  
Sbjct: 176  VYDYELP-PRVELYQLSTGSWRQITDSAP----CYEILKSQWTQIFMNEAVHWIAFIRSR 230

Query: 517  NDDPHAWYHFVLSYSFEDEVFGEVLLPETLAHVSSYAXXXXXXXGNRNGKGLPLTVYRVS 338
                  +   +L +  + E F  + LP+ L +                G+   L      
Sbjct: 231  R----GFRCVILRFHMDGEYFSTIPLPDCLVN----EFPQNLKVAMLGGELCVLQCGWYP 282

Query: 337  GGLPSYGDIWVMKEYGVVGSWTKVFSFDLRGFWLEAPSLGITVTGVTAPPSAMCVRNGGE 158
             G      +W++++Y VV SWTK+ S D        PS G+ +        A+  R  GE
Sbjct: 283  FGNRYVSSVWMLRKYDVVESWTKILSVD--------PSQGLGM--------ALGCRENGE 326

Query: 157  VLLLMDVAGKGCLYSLDVERKTFTDLGIGGEGYTWYLYSGYYTETLVLLND 5
            +L+    +  G L S   E +    LGI G   +++L    + E+L LLN+
Sbjct: 327  MLM---TSRNGELVSYKPENQIVKGLGIRGAQDSFFL-DYTFVESLALLNE 373


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