BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010842
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630090.1| U6 snRNA-associated Sm-like protein LSm4 [Me...   165   5e-53
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l...   198   1e-48
ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putat...   197   4e-48
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l...   196   5e-48
gb|ACU14927.1| unknown [Glycine max]                                  196   5e-48

>ref|XP_003630090.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
           gi|355524112|gb|AET04566.1| U6 snRNA-associated Sm-like
           protein LSm4 [Medicago truncatula]
          Length = 161

 Score =  165 bits (418), Expect(2) = 5e-53
 Identities = 76/79 (96%), Positives = 77/79 (97%)
 Frame = +3

Query: 147 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 326
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 327 IRGNTIKYLRVPDEVIDKV 383
           IRGNTIKYLRVPDEV + V
Sbjct: 61  IRGNTIKYLRVPDEVCNGV 79



 Score = 69.7 bits (169), Expect(2) = 5e-53
 Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
 Frame = +1

Query: 370 LLTKFRKKPRAVQIANHLVWDVGGEEVGRM--VLVDAKQRELGVVLMM 507
           LLTKFRKK RAVQIA+HLVWDV G EVGRM  VLVDAKQ+ LGVVLMM
Sbjct: 82  LLTKFRKK-RAVQIASHLVWDVVGVEVGRMLLVLVDAKQKALGVVLMM 128


>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 149

 Score =  198 bits (504), Expect = 1e-48
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +3

Query: 147 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 326
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 327 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 422
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
           gi|223537623|gb|EEF39246.1| Small nuclear
           ribonucleoprotein SM D3, putative [Ricinus communis]
          Length = 147

 Score =  197 bits (500), Expect = 4e-48
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +3

Query: 147 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 326
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 327 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 422
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 148

 Score =  196 bits (499), Expect = 5e-48
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +3

Query: 147 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 326
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 327 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 422
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>gb|ACU14927.1| unknown [Glycine max]
          Length = 148

 Score =  196 bits (499), Expect = 5e-48
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +3

Query: 147 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 326
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 327 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 422
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92