BLASTX nr result

ID: Glycyrrhiza24_contig00010830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010830
         (2353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   667   0.0  
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...   658   0.0  
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   594   e-167
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              594   e-167
gb|ACJ85781.1| unknown [Medicago truncatula]                          589   e-165

>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  667 bits (1720), Expect = 0.0
 Identities = 339/394 (86%), Positives = 355/394 (90%)
 Frame = -3

Query: 1556 QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 1377
            QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
Sbjct: 222  QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 281

Query: 1376 ALSGQPLLGQPVMVKPSEAEKNLVQSTASVASGPSGLAGPYSGGGRRLYVGNLHFSITEA 1197
            ALSGQPLLGQPVMVKPSEAEKNLVQST SVA+G +GL GPYSGG R+LYVGNLH SITEA
Sbjct: 282  ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEA 341

Query: 1196 DLRGVFEAFGQVELVQLPLDESGHCKGFGFVQFTRLEDARNAQSLNGQLEIGGRTIKVSV 1017
            D+R VFEAFGQVELVQLPLDESGHCKGFGFVQF RLEDARNAQSLNGQLEIGGRTIKVS 
Sbjct: 342  DIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSA 401

Query: 1016 VTDQSAMQEVGGNTGDFDDDEGGGLSLNACSRTLLMQKLDRSGTASSMVGTLGNSVVNNT 837
            VTDQS MQEVGGNTGDFDDDEGGGLSLNACSR +LMQKLDRSGTASSMVG++GNS VNNT
Sbjct: 402  VTDQSGMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNT 461

Query: 836  GLNLPAMGNIPAAALLGATPVDXXXXXXXXXPAIAGLPGGGLQIPTPAIPSIDTIGVPSE 657
            GLNLPA GNI AAA +G                  GL GGGLQIPT  IPSID IGVPSE
Sbjct: 462  GLNLPATGNILAAAPVG------------------GLAGGGLQIPTATIPSIDPIGVPSE 503

Query: 656  CLLLRNMFDPKDEKEPDFDLDIKEDVEAECSKFGKLNHIYVDKRSAGFVYIRFEDTQSAI 477
            CL+L+NMFDPKDE EPDFDLDIKEDVEAECSKFG L HIYVDK+SAGFVY+RFEDTQSAI
Sbjct: 504  CLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRFEDTQSAI 563

Query: 476  SAQRALHGRWFAGQMITASFMVPQSYEERFPDSR 375
            SAQ+ALHGRWFAG+MITASFMVPQSYE++FPDSR
Sbjct: 564  SAQQALHGRWFAGKMITASFMVPQSYEDKFPDSR 597



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 52/140 (37%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
 Frame = -3

Query: 2204 MDFDEYEYLEKTVENHEIKKDKKTANGRDRTVKXXXXXXXXXXXXXXXXXXXXXXXXXXX 2025
            MDFDEYEYLE  VEN + K     ANG D++VK                           
Sbjct: 1    MDFDEYEYLENAVENPQAKH---RANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPKHS 57

Query: 2024 XXXXXXXXDYDRHKERGSSHHRSKSGDGDKGKDQRRSSGG----NRDRDIDKEDKYR--- 1866
                         ++RGSS H SKS DGDK     RSSGG     RDRD D E+K R   
Sbjct: 58   KPGDDSHDRERLREKRGSSRHGSKSRDGDKD----RSSGGIRDRKRDRDRDHENKDRKRD 113

Query: 1865 ---------RERDKDWDLDQ 1833
                     RERD+D   DQ
Sbjct: 114  HGDKDVKRDRERDRDHGRDQ 133


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score =  658 bits (1697), Expect = 0.0
 Identities = 335/394 (85%), Positives = 352/394 (89%)
 Frame = -3

Query: 1556 QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 1377
            QR VFAYQISLKADERDV+EFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
Sbjct: 225  QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284

Query: 1376 ALSGQPLLGQPVMVKPSEAEKNLVQSTASVASGPSGLAGPYSGGGRRLYVGNLHFSITEA 1197
            ALSGQPLLGQPVMVKPSEAEKNLVQST SVA+G +GL GPYSGG R+LYVGNLH SITEA
Sbjct: 285  ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEA 344

Query: 1196 DLRGVFEAFGQVELVQLPLDESGHCKGFGFVQFTRLEDARNAQSLNGQLEIGGRTIKVSV 1017
            D+R VFEAFGQVELVQLPLDESGHCKGFGFVQF RLEDARNAQSLNGQLEIGGRTIKVS 
Sbjct: 345  DIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSA 404

Query: 1016 VTDQSAMQEVGGNTGDFDDDEGGGLSLNACSRTLLMQKLDRSGTASSMVGTLGNSVVNNT 837
            VTDQS MQE GGNTGDFDDDEGGG+SLNACSR +LMQKLDRSGTASSMVG+LGNSVVNNT
Sbjct: 405  VTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSLGNSVVNNT 464

Query: 836  GLNLPAMGNIPAAALLGATPVDXXXXXXXXXPAIAGLPGGGLQIPTPAIPSIDTIGVPSE 657
            GLNLPA GNI AAA +G                   L GGGLQIPT  IPSIDTIGV SE
Sbjct: 465  GLNLPATGNILAAAPVGE------------------LAGGGLQIPTATIPSIDTIGVASE 506

Query: 656  CLLLRNMFDPKDEKEPDFDLDIKEDVEAECSKFGKLNHIYVDKRSAGFVYIRFEDTQSAI 477
            CL+L+NMFDPKDE EPDFDLDIKEDVEAECSK G L HIYVDK+SAGFVY+RFEDTQSAI
Sbjct: 507  CLMLKNMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVYLRFEDTQSAI 566

Query: 476  SAQRALHGRWFAGQMITASFMVPQSYEERFPDSR 375
            SAQ+ALHGRWFAG+MITASFMVPQSYE++FPDSR
Sbjct: 567  SAQQALHGRWFAGKMITASFMVPQSYEDKFPDSR 600



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 48/121 (39%), Positives = 58/121 (47%)
 Frame = -3

Query: 2204 MDFDEYEYLEKTVENHEIKKDKKTANGRDRTVKXXXXXXXXXXXXXXXXXXXXXXXXXXX 2025
            MDFDEYEYLEK VEN E+      ANG D+ VK                           
Sbjct: 1    MDFDEYEYLEKAVENPEVNH---RANGGDKNVKSEERGRNGSSKHKDDDDDDVVDLHPRH 57

Query: 2024 XXXXXXXXDYDRHKERGSSHHRSKSGDGDKGKDQRRSSGGNRDRDIDKEDKYRRERDKDW 1845
                    D +R +ERGS+ H SKS DGDK ++   S    RDRD D E+K  R+RDK+ 
Sbjct: 58   SKSGDNSRDRERQRERGSTLHGSKSRDGDKDRNSGGSRDRRRDRDRDHENK-DRKRDKER 116

Query: 1844 D 1842
            D
Sbjct: 117  D 117


>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  594 bits (1531), Expect = e-167
 Identities = 303/398 (76%), Positives = 334/398 (83%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1556 QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 1377
            QRTVFAYQI LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAI
Sbjct: 218  QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 277

Query: 1376 ALSGQPLLGQPVMVKPSEAEKNLVQSTASVASGPSGLAGPYSGGGRRLYVGNLHFSITEA 1197
            ALSGQPLLGQPVMVKPSEAEKNLVQST + A GP GL GPYSGG RRLYVGNLHF+ITE 
Sbjct: 278  ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 337

Query: 1196 DLRGVFEAFGQVELVQLPLD-ESGHCKGFGFVQFTRLEDARNAQSLNGQLEIGGRTIKVS 1020
             LR VFE FG VELVQLP D E+GHCKGFGFVQF RLEDAR AQSLNGQL+I GRTIKVS
Sbjct: 338  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 397

Query: 1019 VVTDQSAMQEVGGNTGDFDDDEGGGLSLNACSRTLLMQKLDRSGTASSMVGTLGNSVVNN 840
            VVTDQ+ +Q++G N GDFDDDEGGGLSLNA SR +LMQKLDRSGT   + G+LG+ V+NN
Sbjct: 398  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 457

Query: 839  TGLNL---PAMGNIPAAALLGATPVDXXXXXXXXXPAIAGLPGGGLQIPTPAIPSIDTIG 669
             GL L   P +G  P  + L A  V          P +AGLPG GLQ+P   +PSIDTIG
Sbjct: 458  PGLPLSTAPILGAAPVVSPLVAPLVQ------APVPGLAGLPGAGLQVPAVTVPSIDTIG 511

Query: 668  VPSECLLLRNMFDPKDEKEPDFDLDIKEDVEAECSKFGKLNHIYVDKRSAGFVYIRFEDT 489
            VPSECL+L+NMFDPK E EPDFDLDIKEDV+ ECSKFG + HIYVDK SAGFV++RFE+T
Sbjct: 512  VPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENT 571

Query: 488  QSAISAQRALHGRWFAGQMITASFMVPQSYEERFPDSR 375
            Q+AISAQRALHGRWFAG+MITA+FM+PQ+YE +FPDSR
Sbjct: 572  QAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 609



 Score = 85.5 bits (210), Expect = 6e-14
 Identities = 51/123 (41%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = -3

Query: 2204 MDFDEYEYLEKTVENHEIKKDKKTANGRDRTVKXXXXXXXXXXXXXXXXXXXXXXXXXXX 2025
            MDFDEY+YLEKTVEN E +K K+T NG D TVK                           
Sbjct: 1    MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60

Query: 2024 XXXXXXXXDYDRHKERGSSHHRSKSGDG--DKGKDQRRSSGGNRDRDIDKEDKYRRERDK 1851
                    D+DR KERGSSH RS S DG  D+ +  R     +RDRD D+E++  +ERD+
Sbjct: 61   SKSGDDSRDHDRRKERGSSHPRSSSRDGERDRHRSSREHRERDRDRDRDREERNGKERDR 120

Query: 1850 DWD 1842
            + D
Sbjct: 121  EKD 123


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  594 bits (1531), Expect = e-167
 Identities = 303/398 (76%), Positives = 334/398 (83%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1556 QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 1377
            QRTVFAYQI LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAI
Sbjct: 36   QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 95

Query: 1376 ALSGQPLLGQPVMVKPSEAEKNLVQSTASVASGPSGLAGPYSGGGRRLYVGNLHFSITEA 1197
            ALSGQPLLGQPVMVKPSEAEKNLVQST + A GP GL GPYSGG RRLYVGNLHF+ITE 
Sbjct: 96   ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 155

Query: 1196 DLRGVFEAFGQVELVQLPLD-ESGHCKGFGFVQFTRLEDARNAQSLNGQLEIGGRTIKVS 1020
             LR VFE FG VELVQLP D E+GHCKGFGFVQF RLEDAR AQSLNGQL+I GRTIKVS
Sbjct: 156  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 215

Query: 1019 VVTDQSAMQEVGGNTGDFDDDEGGGLSLNACSRTLLMQKLDRSGTASSMVGTLGNSVVNN 840
            VVTDQ+ +Q++G N GDFDDDEGGGLSLNA SR +LMQKLDRSGT   + G+LG+ V+NN
Sbjct: 216  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 275

Query: 839  TGLNL---PAMGNIPAAALLGATPVDXXXXXXXXXPAIAGLPGGGLQIPTPAIPSIDTIG 669
             GL L   P +G  P  + L A  V          P +AGLPG GLQ+P   +PSIDTIG
Sbjct: 276  PGLPLSTAPILGAAPVVSPLVAPLVQ------APVPGLAGLPGAGLQVPAVTVPSIDTIG 329

Query: 668  VPSECLLLRNMFDPKDEKEPDFDLDIKEDVEAECSKFGKLNHIYVDKRSAGFVYIRFEDT 489
            VPSECL+L+NMFDPK E EPDFDLDIKEDV+ ECSKFG + HIYVDK SAGFV++RFE+T
Sbjct: 330  VPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENT 389

Query: 488  QSAISAQRALHGRWFAGQMITASFMVPQSYEERFPDSR 375
            Q+AISAQRALHGRWFAG+MITA+FM+PQ+YE +FPDSR
Sbjct: 390  QAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 427


>gb|ACJ85781.1| unknown [Medicago truncatula]
          Length = 346

 Score =  589 bits (1518), Expect = e-165
 Identities = 299/360 (83%), Positives = 315/360 (87%)
 Frame = -3

Query: 1454 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVASGP 1275
            MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASV +GP
Sbjct: 1    MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVVNGP 60

Query: 1274 SGLAGPYSGGGRRLYVGNLHFSITEADLRGVFEAFGQVELVQLPLDESGHCKGFGFVQFT 1095
            SG  GPYSGG RRLYVGNLH SITEADLR VFEAFGQVELVQ+PLD+ GHCKGFGFVQF 
Sbjct: 61   SGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLDDIGHCKGFGFVQFA 120

Query: 1094 RLEDARNAQSLNGQLEIGGRTIKVSVVTDQSAMQEVGGNTGDFDDDEGGGLSLNACSRTL 915
            RLEDA+NAQSLN QLEIGGRTIKVS VTDQS MQE GGNTGD DDDEGGGLSLNA SR L
Sbjct: 121  RLEDAKNAQSLNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDIDDDEGGGLSLNASSRAL 180

Query: 914  LMQKLDRSGTASSMVGTLGNSVVNNTGLNLPAMGNIPAAALLGATPVDXXXXXXXXXPAI 735
            LMQKLDRSG ASSMVG LGNSVVNNTGLNL AMG+IPA AL+ A  V             
Sbjct: 181  LMQKLDRSGIASSMVGLLGNSVVNNTGLNLQAMGSIPAVALIPAPGV------------- 227

Query: 734  AGLPGGGLQIPTPAIPSIDTIGVPSECLLLRNMFDPKDEKEPDFDLDIKEDVEAECSKFG 555
             G+PGGGLQIP    P+IDTIG PSECLLL+NMFDP+DEKEPDFDLD+KEDVEAECSKFG
Sbjct: 228  -GMPGGGLQIPMLTSPTIDTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFG 286

Query: 554  KLNHIYVDKRSAGFVYIRFEDTQSAISAQRALHGRWFAGQMITASFMVPQSYEERFPDSR 375
             L HIYVDKRSAGFVY+RFE+TQ AISAQRALHGRWFAG+MITASFMVPQ YE+RFPDS+
Sbjct: 287  NLKHIYVDKRSAGFVYLRFENTQPAISAQRALHGRWFAGKMITASFMVPQLYEDRFPDSK 346


Top