BLASTX nr result

ID: Glycyrrhiza24_contig00010800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010800
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588901.1| Copper transporter [Medicago truncatula] gi|...   162   2e-38
ref|XP_003550220.1| PREDICTED: copper transporter 5-like [Glycin...   162   3e-38
ref|XP_003544582.1| PREDICTED: copper transporter 5-like [Glycin...   155   3e-36
gb|AFK34994.1| unknown [Lotus japonicus] gi|388502884|gb|AFK3950...   130   9e-29
ref|XP_002326289.1| copper transporter [Populus trichocarpa] gi|...   126   2e-27

>ref|XP_003588901.1| Copper transporter [Medicago truncatula]
           gi|355477949|gb|AES59152.1| Copper transporter [Medicago
           truncatula]
          Length = 142

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/114 (72%), Positives = 90/114 (78%)
 Frame = +2

Query: 29  MMHMTLYWGKEVTLLFDSWKTDSWTSYXXXXXXXXXXXXFYQYLENLRIRLKLVAGERRP 208
           MMHMTLYWGK VTLLFDSWKT+SWTSY            FYQYLENLRIRLK  +GE R 
Sbjct: 1   MMHMTLYWGKNVTLLFDSWKTNSWTSYLLSLIACFIIATFYQYLENLRIRLKFFSGEGRT 60

Query: 209 SPVPDIQTPLLRWNNAVQRNRVAESVLFGVNYAIGYLLMLAIMSFNGGVFVAIV 370
           +PVP+I+TPLL  N  V RN+V ESVLFGVN AIGYLLMLAIMSFNGGVF+AIV
Sbjct: 61  TPVPEIRTPLLGLNK-VSRNKVVESVLFGVNSAIGYLLMLAIMSFNGGVFLAIV 113


>ref|XP_003550220.1| PREDICTED: copper transporter 5-like [Glycine max]
          Length = 148

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/119 (68%), Positives = 92/119 (77%), Gaps = 5/119 (4%)
 Frame = +2

Query: 29  MMHMTLYWGKEVTLLFDSWKTDSWTSYXXXXXXXXXXXXFYQYLENLRIRLKLVAGERRP 208
           MMHMTLYWGK+VT+L DSWKTDSWTSY            FYQYLEN RIRLKL+AG+RRP
Sbjct: 1   MMHMTLYWGKKVTILIDSWKTDSWTSYVLSLLACLVVAAFYQYLENRRIRLKLLAGDRRP 60

Query: 209 SPVPDIQTPLLRW-----NNAVQRNRVAESVLFGVNYAIGYLLMLAIMSFNGGVFVAIV 370
            P P+I+TPLLRW     +NA    + AE+VLFGVN AIGYLLMLAIMSFNGGVF+AIV
Sbjct: 61  LPAPEIRTPLLRWGVAGGDNARLGVKFAEAVLFGVNSAIGYLLMLAIMSFNGGVFLAIV 119


>ref|XP_003544582.1| PREDICTED: copper transporter 5-like [Glycine max]
          Length = 147

 Score =  155 bits (393), Expect = 3e-36
 Identities = 77/117 (65%), Positives = 88/117 (75%), Gaps = 4/117 (3%)
 Frame = +2

Query: 29  MMHMTLYWGKEVTLLFDSWKTDSWTSYXXXXXXXXXXXXFYQYLENLRIRLKLVAGERRP 208
           MMHMT YWGK+VT+L DSWKTDSWTSY             YQYLEN RIRLKL+AG RRP
Sbjct: 1   MMHMTFYWGKKVTILIDSWKTDSWTSYFLSLLACLVAAALYQYLENRRIRLKLLAGGRRP 60

Query: 209 SPVPDIQTPLLRWNNAVQRNRV----AESVLFGVNYAIGYLLMLAIMSFNGGVFVAI 367
           SP P+I+ PLLRW  A  + ++    AE+VLFGVN AIGYLLMLA+MSFNGGVF+AI
Sbjct: 61  SPAPEIRAPLLRWGVAGDKEKLGVKFAEAVLFGVNSAIGYLLMLAVMSFNGGVFLAI 117


>gb|AFK34994.1| unknown [Lotus japonicus] gi|388502884|gb|AFK39508.1| unknown
           [Lotus japonicus]
          Length = 143

 Score =  130 bits (328), Expect = 9e-29
 Identities = 72/119 (60%), Positives = 83/119 (69%), Gaps = 5/119 (4%)
 Frame = +2

Query: 29  MMHMTLYWGKEVTLLFDSWKTDSWTSYXXXXXXXXXXXXFYQYLENLRIRLKLVAGERRP 208
           MMHMT YWGK+VT+LFDSWKTDSWTSY            FYQ LEN RIRLKL A  +  
Sbjct: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGK-- 58

Query: 209 SPVP-DIQTPLLR----WNNAVQRNRVAESVLFGVNYAIGYLLMLAIMSFNGGVFVAIV 370
            PVP +I+TPL+R     + A    +V  S+LFGV+  IGYLLMLA+MSFNGGVFVAIV
Sbjct: 59  -PVPLEIETPLIRRKIVGDKAKAGVKVGGSILFGVSSGIGYLLMLAVMSFNGGVFVAIV 116


>ref|XP_002326289.1| copper transporter [Populus trichocarpa]
           gi|222833482|gb|EEE71959.1| copper transporter [Populus
           trichocarpa]
          Length = 141

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/114 (56%), Positives = 73/114 (64%)
 Frame = +2

Query: 29  MMHMTLYWGKEVTLLFDSWKTDSWTSYXXXXXXXXXXXXFYQYLENLRIRLKLVAGERRP 208
           MMHMTLYWG +VTLLFD WKTDSW SY            FYQYLE+ RIR K +A     
Sbjct: 1   MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPS 60

Query: 209 SPVPDIQTPLLRWNNAVQRNRVAESVLFGVNYAIGYLLMLAIMSFNGGVFVAIV 370
              P +  PLL         + A ++LFG+N AIGYLLMLAIMSFNGGVF+AIV
Sbjct: 61  QQPPPVNAPLLTPKRRASSAKFATALLFGINAAIGYLLMLAIMSFNGGVFLAIV 114


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