BLASTX nr result

ID: Glycyrrhiza24_contig00010793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010793
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525746.1| PREDICTED: PGR5-like protein 1A, chloroplast...    86   2e-34
gb|ACU23217.1| unknown [Glycine max]                                   86   2e-34
ref|XP_003549873.1| PREDICTED: PGR5-like protein 1A, chloroplast...    85   2e-32
gb|AFK47748.1| unknown [Lotus japonicus]                               81   2e-31
ref|XP_003517448.1| PREDICTED: PGR5-like protein 1A, chloroplast...    85   2e-30

>ref|XP_003525746.1| PREDICTED: PGR5-like protein 1A, chloroplastic-like [Glycine max]
          Length = 321

 Score = 85.9 bits (211), Expect(2) = 2e-34
 Identities = 53/79 (67%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
 Frame = +2

Query: 5   ASKLAFTLTCRPRPFAASTPLIPISSTSRVHPIQLNASRHLCLRRRLFVFSPKATSDQQG 184
           ASKLAFTLT  PRP  A  PL PISS S VH IQ N  RHLCLR+RLF+ SP AT+DQQG
Sbjct: 4   ASKLAFTLT-PPRPCTA--PLTPISSASGVHLIQFNG-RHLCLRQRLFLLSPMATADQQG 59

Query: 185 KVEE----DAVVDGKILPY 229
           KVEE       VD KILPY
Sbjct: 60  KVEEFEDDSNTVDSKILPY 78



 Score = 85.1 bits (209), Expect(2) = 2e-34
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 321 SIDKKEKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 446
           SIDKKEKKS+GELEQEFLQALQAFYYEGKAIMSNEEFDNLKE
Sbjct: 80  SIDKKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 121


>gb|ACU23217.1| unknown [Glycine max]
          Length = 321

 Score = 85.9 bits (211), Expect(2) = 2e-34
 Identities = 53/79 (67%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
 Frame = +2

Query: 5   ASKLAFTLTCRPRPFAASTPLIPISSTSRVHPIQLNASRHLCLRRRLFVFSPKATSDQQG 184
           ASKLAFTLT  PRP  A  PL PISS S VH IQ N  RHLCLR+RLF+ SP AT+DQQG
Sbjct: 4   ASKLAFTLT-PPRPCTA--PLTPISSASGVHLIQFNG-RHLCLRQRLFLLSPMATADQQG 59

Query: 185 KVEE----DAVVDGKILPY 229
           KVEE       VD KILPY
Sbjct: 60  KVEEFEDDSNTVDSKILPY 78



 Score = 85.1 bits (209), Expect(2) = 2e-34
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 321 SIDKKEKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 446
           SIDKKEKKS+GELEQEFLQALQAFYYEGKAIMSNEEFDNLKE
Sbjct: 80  SIDKKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 121


>ref|XP_003549873.1| PREDICTED: PGR5-like protein 1A, chloroplastic-like [Glycine max]
          Length = 332

 Score = 85.1 bits (209), Expect(2) = 2e-32
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 321 SIDKKEKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 446
           SIDKKEKKS+GELEQEFLQALQAFYYEGKAIMSNEEFDNLKE
Sbjct: 91  SIDKKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 132



 Score = 79.3 bits (194), Expect(2) = 2e-32
 Identities = 54/90 (60%), Positives = 58/90 (64%), Gaps = 15/90 (16%)
 Frame = +2

Query: 5   ASKLAFTLTCRPRPFAASTPLIPISSTSR-----------VHPIQLNASRHLCLRRRLFV 151
           ASKLAFTLT  PRP  A  PL PISS S            ++ IQ N  RHLCLRRRLF+
Sbjct: 4   ASKLAFTLT-PPRPCTA--PLTPISSLSSSSSSSSASASGINFIQFNG-RHLCLRRRLFL 59

Query: 152 FSPKATSDQQGKVEE----DAVVDGKILPY 229
            SPKAT+DQQGKVEE      VVD KILPY
Sbjct: 60  LSPKATADQQGKVEEFEDDSNVVDSKILPY 89


>gb|AFK47748.1| unknown [Lotus japonicus]
          Length = 327

 Score = 81.3 bits (199), Expect(2) = 2e-31
 Identities = 38/42 (90%), Positives = 42/42 (100%)
 Frame = +3

Query: 321 SIDKKEKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 446
           SIDKK+KKSVGE+EQ+FLQALQ+FYYEGKAIMSNEEFDNLKE
Sbjct: 86  SIDKKDKKSVGEMEQDFLQALQSFYYEGKAIMSNEEFDNLKE 127



 Score = 79.7 bits (195), Expect(2) = 2e-31
 Identities = 51/85 (60%), Positives = 58/85 (68%), Gaps = 10/85 (11%)
 Frame = +2

Query: 5   ASKLAFTLT----CRPRPFAASTPLIPISSTS----RVHPIQLNASRHLCLRRRLFVFSP 160
           ASKLAFTLT    C P      TPLIP+SS+S    R + IQ N  R LCLRRRLF+ SP
Sbjct: 4   ASKLAFTLTSPRSCTP---PTPTPLIPLSSSSFTSSRFNLIQFNG-RQLCLRRRLFLLSP 59

Query: 161 KATSDQQGKVE--EDAVVDGKILPY 229
           KAT+DQQGKVE  E++ VD KI PY
Sbjct: 60  KATADQQGKVEEFEESAVDSKIFPY 84


>ref|XP_003517448.1| PREDICTED: PGR5-like protein 1A, chloroplastic-like [Glycine max]
          Length = 316

 Score = 84.7 bits (208), Expect(2) = 2e-30
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 321 SIDKKEKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKE 446
           SIDKKEKKSVGE+EQEFLQALQAFYYEGKAIMSNEEFDNLKE
Sbjct: 75  SIDKKEKKSVGEMEQEFLQALQAFYYEGKAIMSNEEFDNLKE 116



 Score = 72.8 bits (177), Expect(2) = 2e-30
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
 Frame = +2

Query: 2   MASKLAFTLTCRPRPFAASTPLIPISSTS--RVHPIQLNASRHLCLRRRLFVFSPKATSD 175
           MASKLAFTLT  P P    TP+  +SS+S  R+H +Q N  RH+CLR RLF+FSP AT+D
Sbjct: 1   MASKLAFTLTY-PLPL---TPISSLSSSSASRLHLLQFNG-RHICLRPRLFLFSPMATAD 55

Query: 176 QQGKVEED-AVVDGKILPY 229
           Q  KVEED AVVD KIL Y
Sbjct: 56  QD-KVEEDAAVVDSKILQY 73


Top