BLASTX nr result
ID: Glycyrrhiza24_contig00010788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00010788
(347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicag... 129 3e-28
ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncat... 129 3e-28
ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncat... 128 6e-28
ref|XP_003624912.1| TMV resistance protein N [Medicago truncatul... 127 1e-27
ref|XP_003624911.1| TIR-NBS-LRR RCT1 resistance protein [Medicag... 127 1e-27
>ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance
protein [Medicago truncatula]
Length = 1350
Score = 129 bits (323), Expect = 3e-28
Identities = 62/93 (66%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Frame = +3
Query: 66 STPSQSTRVYDVFLSFRGE-TRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQA 242
S + ++YDVFLSFRGE +RA F+SHLY++L+NAG+ VF+DDDEIQRGD +S+SLL+A
Sbjct: 205 SNKTDQPKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLRA 264
Query: 243 IKSSKIFVIVLSPNYANSRWCMQELENIMEIHR 341
I S+IF++VLS NYANSRWCM ELE IMEI R
Sbjct: 265 IGHSRIFIVVLSTNYANSRWCMLELEKIMEIGR 297
>ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein
[Medicago truncatula]
Length = 1897
Score = 129 bits (323), Expect = 3e-28
Identities = 62/93 (66%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Frame = +3
Query: 66 STPSQSTRVYDVFLSFRGE-TRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQA 242
S + ++YDVFLSFRGE +RA F+SHLY++L+NAG+ VF+DDDEIQRGD +S+SLL+A
Sbjct: 535 SNKTDQPKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLRA 594
Query: 243 IKSSKIFVIVLSPNYANSRWCMQELENIMEIHR 341
I S+IF++VLS NYANSRWCM ELE IMEI R
Sbjct: 595 IGHSRIFIVVLSTNYANSRWCMLELEKIMEIGR 627
Score = 58.2 bits (139), Expect = 7e-07
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Frame = +3
Query: 27 PSMSSPTSPQVPFSTPSQSTRVYDVFLSFRGETRA--SFVSHLYTTL-RNAGLCVFRDDD 197
PS+ +PT+P+ YDV+LSF + + SFV +Y L R AG+ VF +++
Sbjct: 18 PSIRTPTNPK---------RARYDVYLSFCDQDKDLHSFVFSIYNALSRKAGVDVFWENE 68
Query: 198 EIQRGDHLS-VSLLQAIKSSKIFVIVLSPNYANSRWCMQELENIMEIHR 341
GD S+L I+ K+FVIV S +Y NSR C+ E + I E R
Sbjct: 69 RDGYGDREKPTSVLNVIRDCKVFVIVFSRDYFNSRSCLHEFKKITECCR 117
>ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
gi|355505912|gb|AES87054.1| NBS-LRR resistance protein
[Medicago truncatula]
Length = 1684
Score = 128 bits (321), Expect = 6e-28
Identities = 62/93 (66%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
Frame = +3
Query: 66 STPSQSTRVYDVFLSFRGE-TRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQA 242
S + ++YDVFLSFRGE RA F+SHLY++L+NAG+ VFRDDDEIQRGDH+S+SLL+A
Sbjct: 505 SNNTDQPKMYDVFLSFRGEDNRAKFMSHLYSSLQNAGIYVFRDDDEIQRGDHISISLLRA 564
Query: 243 IKSSKIFVIVLSPNYANSRWCMQELENIMEIHR 341
I+ S+ ++VLS NYANSRWCM ELE IMEI R
Sbjct: 565 IEQSRTCIVVLSTNYANSRWCMLELEKIMEIGR 597
Score = 55.1 bits (131), Expect = 6e-06
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 69 TPSQSTRVYDVFLSFRGETRASFVSHLYTTLR-NAGLCVFRDDDEIQRGDHLSVSLLQAI 245
T R Y+VFLSF + F+S L L AG+ VF D I+R H+ S+L I
Sbjct: 19 TTDPKKRRYNVFLSFCAHDKGYFLSSLEEALSLEAGINVFGD---IKRFQHVE-SVLNVI 74
Query: 246 KSSKIFVIVLSPNYANSRWCMQELENIMEIHR 341
+ K+ V++ S NY NS C+QELE I + R
Sbjct: 75 QDCKVAVVLFSKNYTNSSSCIQELEKITQCCR 106
>ref|XP_003624912.1| TMV resistance protein N [Medicago truncatula]
gi|355499927|gb|AES81130.1| TMV resistance protein N
[Medicago truncatula]
Length = 2106
Score = 127 bits (319), Expect = 1e-27
Identities = 63/89 (70%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = +3
Query: 66 STPSQSTRVYDVFLSFRG-ETRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQA 242
ST + R+YDVFLSFRG +TRA F+SHLYT L NAG+ VFRDDDEIQRGD +S SLLQA
Sbjct: 1016 STAMAAGRIYDVFLSFRGNDTRAKFISHLYTALENAGIYVFRDDDEIQRGDQISASLLQA 1075
Query: 243 IKSSKIFVIVLSPNYANSRWCMQELENIM 329
I+ SKI ++VLS +YA+SRWCM ELENIM
Sbjct: 1076 IEQSKISIVVLSRSYADSRWCMLELENIM 1104
Score = 122 bits (305), Expect = 4e-26
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = +3
Query: 90 VYDVFLSFRGE-TRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQAIKSSKIFV 266
+YDVFLSFRG+ T A F+SHLYT L NAG+ VFR DDEIQRGD +SVSLLQAI S+I +
Sbjct: 522 IYDVFLSFRGDDTHAKFISHLYTALENAGIYVFRGDDEIQRGDQVSVSLLQAIGQSRISI 581
Query: 267 IVLSPNYANSRWCMQELENIM 329
IVLS NYANSRWCM ELENIM
Sbjct: 582 IVLSRNYANSRWCMLELENIM 602
Score = 70.1 bits (170), Expect = 2e-10
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 90 VYDVFLSFRG-ETRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHL-SVSLLQAIKSSKIF 263
+YDVFLSF +T S S+LYT L AG+ V++D+D++ D + + S+L AI S++
Sbjct: 19 IYDVFLSFCDKDTSESLASYLYTALTVAGIVVYKDEDKLLNHDQMITSSVLHAIAGSRLS 78
Query: 264 VIVLSPNYANSRWCMQELENIMEIHR 341
+IV S YA S C QELE IME R
Sbjct: 79 IIVFSKLYAVSTCCRQELEKIMECRR 104
>ref|XP_003624911.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
gi|355499926|gb|AES81129.1| TIR-NBS-LRR RCT1 resistance
protein [Medicago truncatula]
Length = 444
Score = 127 bits (319), Expect = 1e-27
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +3
Query: 87 RVYDVFLSFRGE-TRASFVSHLYTTLRNAGLCVFRDDDEIQRGDHLSVSLLQAIKSSKIF 263
R+YDVFLSFRGE TRA F+SHLYT+L+NA + VFRDD+EIQRGD +SVSLL+AI S+I
Sbjct: 294 RIYDVFLSFRGEDTRARFISHLYTSLQNARINVFRDDNEIQRGDQISVSLLRAIGQSRIS 353
Query: 264 VIVLSPNYANSRWCMQELENIMEIHRA 344
+IVLS NYANSRWCMQELE IME R+
Sbjct: 354 IIVLSSNYANSRWCMQELEQIMECGRS 380