BLASTX nr result
ID: Glycyrrhiza24_contig00010765
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00010765 (596 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin... 96 6e-18 ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containin... 89 6e-16 ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [... 89 7e-16 ref|XP_003538870.1| PREDICTED: uncharacterized protein LOC100800... 87 2e-15 ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 71 2e-10 >ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Glycine max] Length = 1953 Score = 95.5 bits (236), Expect = 6e-18 Identities = 47/57 (82%), Positives = 49/57 (85%), Gaps = 3/57 (5%) Frame = +3 Query: 435 ERNDGCCVAVLKRKRGRPAKGT--PK-TTPPLRQKKEEEDVCFICFDGGSLVLCDRR 596 E N GCC +VLKRKRGRPAKG+ PK TPP RQKKEEEDVCFICFDGGSLVLCDRR Sbjct: 1392 EANAGCCASVLKRKRGRPAKGSRVPKGMTPPSRQKKEEEDVCFICFDGGSLVLCDRR 1448 Score = 87.4 bits (215), Expect = 2e-15 Identities = 38/46 (82%), Positives = 42/46 (91%) Frame = +3 Query: 459 AVLKRKRGRPAKGTPKTTPPLRQKKEEEDVCFICFDGGSLVLCDRR 596 AV KRKRGRPAKG PK PP+RQ+++EEDVCFICFDGGSLVLCDRR Sbjct: 50 AVFKRKRGRPAKGAPKVAPPVRQQQDEEDVCFICFDGGSLVLCDRR 95 >ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Glycine max] Length = 1365 Score = 89.0 bits (219), Expect = 6e-16 Identities = 39/46 (84%), Positives = 43/46 (93%) Frame = +3 Query: 459 AVLKRKRGRPAKGTPKTTPPLRQKKEEEDVCFICFDGGSLVLCDRR 596 AVLKRKRGRPAKG PK PP+RQ+++EEDVCFICFDGGSLVLCDRR Sbjct: 58 AVLKRKRGRPAKGAPKVVPPVRQQQDEEDVCFICFDGGSLVLCDRR 103 >ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355513454|gb|AES95077.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 1255 Score = 88.6 bits (218), Expect = 7e-16 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 14/68 (20%) Frame = +3 Query: 435 ERNDGCCVA-------------VLKRKRGRPAKGTPKTTPPLRQ-KKEEEDVCFICFDGG 572 ER+ GCC A V+K+KRGRPAKGTPK PP +Q KKE+EDVCFICFDGG Sbjct: 48 ERDGGCCTAPKVVLAVIAENSEVMKKKRGRPAKGTPKVAPPPKQIKKEDEDVCFICFDGG 107 Query: 573 SLVLCDRR 596 SLVLCDRR Sbjct: 108 SLVLCDRR 115 >ref|XP_003538870.1| PREDICTED: uncharacterized protein LOC100800608 [Glycine max] Length = 655 Score = 87.4 bits (215), Expect = 2e-15 Identities = 43/57 (75%), Positives = 46/57 (80%), Gaps = 3/57 (5%) Frame = +3 Query: 435 ERNDGCCVAVLKRKRGRPAKGT--PK-TTPPLRQKKEEEDVCFICFDGGSLVLCDRR 596 + N CC +VLKRKRGRPAKG PK PP RQK+EEEDVCFICFDGGSLVLCDRR Sbjct: 41 QANGACCPSVLKRKRGRPAKGNRVPKGIIPPSRQKQEEEDVCFICFDGGSLVLCDRR 97 >ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis vinifera] Length = 1643 Score = 70.9 bits (172), Expect = 2e-10 Identities = 32/43 (74%), Positives = 36/43 (83%) Frame = +3 Query: 468 KRKRGRPAKGTPKTTPPLRQKKEEEDVCFICFDGGSLVLCDRR 596 KRKRGRP +G K PP ++KK+EEDVCFICFDGG LVLCDRR Sbjct: 92 KRKRGRPPRGQAKPPPP-KKKKDEEDVCFICFDGGDLVLCDRR 133