BLASTX nr result

ID: Glycyrrhiza24_contig00010758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010758
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48522.1| unknown [Lotus japonicus]                               80   2e-29
ref|NP_567196.1| SAUR-like auxin-responsive protein [Arabidopsis...    78   6e-28
ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis...    78   4e-27
ref|NP_001240001.1| uncharacterized protein LOC100808516 [Glycin...    73   2e-25
ref|XP_003528774.1| PREDICTED: auxin-induced protein 15A-like [G...    72   3e-25

>gb|AFK48522.1| unknown [Lotus japonicus]
          Length = 106

 Score = 79.7 bits (195), Expect(2) = 2e-29
 Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +3

Query: 216 LKEAEEEFGFAHQGTITIPCQVAQFKYVQRLIDSENKSIQNQHQ-NHLVGCFRS 374
           LKEAEEEFGFA +GTI +PC VA+FK++Q LIDSE K + + HQ +HLVGCFR+
Sbjct: 53  LKEAEEEFGFAQKGTIVLPCHVAEFKHIQHLIDSERKPLHHHHQPHHLVGCFRA 106



 Score = 74.3 bits (181), Expect(2) = 2e-29
 Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   VTYHHHQHYHDGR-RVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAE 163
           +TYHHH     GR + + KG +AIKVGQG++QQRITVP++YLNHPLF QLLKEAE
Sbjct: 8   LTYHHH-----GRTKEIPKGWLAIKVGQGQEQQRITVPLIYLNHPLFVQLLKEAE 57


>ref|NP_567196.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|2252854|gb|AAB62852.1| similar to auxin-induced
           protein [Arabidopsis thaliana]
           gi|7267427|emb|CAB80897.1| AT4g00880 [Arabidopsis
           thaliana] gi|17380988|gb|AAL36306.1| unknown protein
           [Arabidopsis thaliana] gi|20466031|gb|AAM20350.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656549|gb|AEE81949.1| SAUR-like auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 122

 Score = 77.8 bits (190), Expect(2) = 6e-28
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +2

Query: 11  HHHQHYHDGRRVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAE 163
           HHH+H H+    V KGC+A+KVGQGE+Q+R  +PVMY NHPLF QLLKEAE
Sbjct: 19  HHHEHDHEK---VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAE 66



 Score = 71.6 bits (174), Expect(2) = 6e-28
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 8/60 (13%)
 Frame = +3

Query: 216 LKEAEEEFGFAHQGTITIPCQVAQFKYVQRLIDSENKSI--------QNQHQNHLVGCFR 371
           LKEAEEEFGFA +GTITIPC V +F+YVQ LID EN            + H NHL+ CFR
Sbjct: 62  LKEAEEEFGFAQKGTITIPCHVEEFRYVQGLIDRENTRFLGTNLLDHHHHHHNHLIRCFR 121


>ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318759|gb|EFH49181.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 77.8 bits (190), Expect(2) = 4e-27
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +2

Query: 11  HHHQHYHDGRRVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAE 163
           HHH+H H+    V KGC+A+KVGQGE+Q+R  +PVMY NHPLF QLLKEAE
Sbjct: 19  HHHEHDHEK---VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFVQLLKEAE 66



 Score = 68.9 bits (167), Expect(2) = 4e-27
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 8/60 (13%)
 Frame = +3

Query: 216 LKEAEEEFGFAHQGTITIPCQVAQFKYVQRLIDSENKSI--------QNQHQNHLVGCFR 371
           LKEAEEEFGF+ +GTITIPC V +F+YV+ LID EN            + H NHL+ CFR
Sbjct: 62  LKEAEEEFGFSQKGTITIPCHVEEFRYVRGLIDRENTRFLGNNLLDHHHHHHNHLIRCFR 121


>ref|NP_001240001.1| uncharacterized protein LOC100808516 [Glycine max]
           gi|255637197|gb|ACU18929.1| unknown [Glycine max]
          Length = 123

 Score = 72.8 bits (177), Expect(2) = 2e-25
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = +3

Query: 216 LKEAEEEFGFAHQGTITIPCQVAQFKYVQRLIDSENKSIQNQHQNHLVGCFRSSS 380
           LKEAEEE+GF  QGTI IPC V  F+YVQ LID E  S   QHQ+H++ CFR SS
Sbjct: 70  LKEAEEEYGFDQQGTIIIPCHVKDFRYVQGLIDKEKSS---QHQHHVISCFRPSS 121



 Score = 67.8 bits (164), Expect(2) = 2e-25
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = +2

Query: 11  HHHQHYHDGRRVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAE 163
           HHH+      + + KG + IKVGQGE+QQ+I +P++YLNHPLF+QLLKEAE
Sbjct: 24  HHHRRKKVLAKDIPKGFLPIKVGQGEEQQKIVMPIVYLNHPLFSQLLKEAE 74


>ref|XP_003528774.1| PREDICTED: auxin-induced protein 15A-like [Glycine max]
          Length = 122

 Score = 72.4 bits (176), Expect(2) = 3e-25
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = +3

Query: 216 LKEAEEEFGFAHQGTITIPCQVAQFKYVQRLIDSENKSIQNQHQNHLVGCFRSS 377
           LKEAEEE+GF  QGTI IPC V  F+YVQ LID E K  ++QHQ+H++ CFR S
Sbjct: 69  LKEAEEEYGFDQQGTIIIPCHVKDFRYVQGLIDKE-KCSEHQHQHHVISCFRPS 121



 Score = 67.8 bits (164), Expect(2) = 3e-25
 Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
 Frame = +2

Query: 2   VTYHHHQHYHDGRRV----VTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAE 163
           VT   + H+H  ++V    + KG + IKVGQGE+QQ I +P+MYLNHPLF+QLLKEAE
Sbjct: 16  VTNRPYPHHHHRKKVLAKDIPKGFLPIKVGQGEEQQIIVMPIMYLNHPLFSQLLKEAE 73


Top