BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010696
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   199   2e-49
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002884507.1| pentatricopeptide repeat-containing protein ...   120   1e-25
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...   119   3e-25
gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thal...   119   3e-25

>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/120 (78%), Positives = 106/120 (88%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           L+SLL++CGRD NL LGSSIHARIIKQP SFDFD S RNALF+WNSLLSMYSKCG+ R+A
Sbjct: 37  LTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNA 96

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVLSAC 2
             +FD MPVRDTVSWN MISGFLRNGDFDT+FKFFK+M+ S  VCCRFDKAT+TT+LS C
Sbjct: 97  GNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGC 156



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/120 (37%), Positives = 70/120 (58%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           +S++L V G    L LG  IH+ IIK+    +         FV N L++MYSKCGDL D+
Sbjct: 355 VSAVLGVFGVGTYLALGKQIHSLIIKKNFCEN--------PFVGNGLVNMYSKCGDLSDS 406

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVLSAC 2
           + +F +M  +++VSWN++I+ F R+GD   A +F+++M V G         T  ++L AC
Sbjct: 407 LLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAP---TDVTFLSLLHAC 463


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/122 (56%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSH--RNALFVWNSLLSMYSKCGDLR 188
           +S LLS+CGR+G L LGSS+HA IIK     D ++    RN + VWNSLLSMYS+CG+LR
Sbjct: 47  ISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELR 106

Query: 187 DAIKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVLS 8
           DA K+FD MP++DT+SWN+ ISG L NGD +  F+ FK++  SG    +FD+AT+TTVL+
Sbjct: 107 DATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIY--QFDQATLTTVLT 164

Query: 7   AC 2
           AC
Sbjct: 165 AC 166



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/102 (43%), Positives = 67/102 (65%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           +S++L V G D +L LG  IH+ IIK+    ++        FV N L++MYSKCGDL D+
Sbjct: 361 ISAILGVFGIDTSLALGKQIHSLIIKKSFGSNY--------FVNNGLINMYSKCGDLDDS 412

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSG 56
           IK+F  MP R++VSWN+MI+ F R+G+   A + +++M + G
Sbjct: 413 IKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEG 454


>ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330347|gb|EFH60766.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 676

 Score =  120 bits (301), Expect = 1e-25
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLG-LGSSIHARIIKQPLSFD-FDSS-HRNALFVWNSLLSMYSKCGDL 191
           +S LLS+CGR+G    LG  +HA I+K P  FD  D+  HRNAL VWNSLLS+Y KCG L
Sbjct: 47  MSLLLSICGREGWFPYLGPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKCGKL 106

Query: 190 RDAIKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVL 11
            DA+KLFD MPVRD +S N +  GFLRN + ++ F   K+M  SG     FD+AT+T VL
Sbjct: 107 GDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG----FDQATLTIVL 162

Query: 10  SAC 2
           S C
Sbjct: 163 SVC 165



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/99 (41%), Positives = 62/99 (62%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           +S++L V   D +LGLG  +H+ +IK+    +         FV N L++MYSKCGDL D+
Sbjct: 360 VSAILGVSFVDNSLGLGKQLHSLVIKRKFCGN--------TFVNNGLINMYSKCGDLTDS 411

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMS 65
             +F RMP R+ VSWN+MI+ F R+G    A K +++M+
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLG-LGSSIHARIIKQPLSFD-FDSS-HRNALFVWNSLLSMYSKCGDL 191
           +S LLS+CGR+G    LG  +HA IIK P  F+  D+  HRNAL VWNSLLS+Y+KCG L
Sbjct: 47  MSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKL 106

Query: 190 RDAIKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVL 11
            DAIKLFD MP+RD +S N +  GFLRN + ++ F   K+M  SG     FD AT+T VL
Sbjct: 107 VDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG----FDHATLTIVL 162

Query: 10  SAC 2
           S C
Sbjct: 163 SVC 165



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           +S++L V   D +LGLG  +H+ +IK+  S +         FV N L++MYSKCGDL D+
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN--------TFVNNGLINMYSKCGDLTDS 411

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMS 65
             +F RMP R+ VSWN+MI+ F R+G    A K +++M+
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450


>gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
          Length = 770

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLG-LGSSIHARIIKQPLSFD-FDSS-HRNALFVWNSLLSMYSKCGDL 191
           +S LLS+CGR+G    LG  +HA IIK P  F+  D+  HRNAL VWNSLLS+Y+KCG L
Sbjct: 47  MSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKL 106

Query: 190 RDAIKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMSVSGAVCCRFDKATMTTVL 11
            DAIKLFD MP+RD +S N +  GFLRN + ++ F   K+M  SG     FD AT+T VL
Sbjct: 107 VDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG----FDHATLTIVL 162

Query: 10  SAC 2
           S C
Sbjct: 163 SVC 165



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -2

Query: 361 LSSLLSVCGRDGNLGLGSSIHARIIKQPLSFDFDSSHRNALFVWNSLLSMYSKCGDLRDA 182
           +S++L V   D +LGLG  +H+ +IK+  S +         FV N L++MYSKCGDL D+
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN--------TFVNNGLINMYSKCGDLTDS 411

Query: 181 IKLFDRMPVRDTVSWNAMISGFLRNGDFDTAFKFFKKMS 65
             +F RMP R+ VSWN+MI+ F R+G    A K +++M+
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450