BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010686
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   161   1e-37
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                   149   7e-34
gb|AFK48593.1| unknown [Lotus japonicus]                              145   8e-33
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   144   3e-32
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...   139   8e-31

>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score =  161 bits (408), Expect = 1e-37
 Identities = 95/256 (37%), Positives = 143/256 (55%), Gaps = 5/256 (1%)
 Frame = +2

Query: 2    ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEGPRFVADLWYAWCAR 181
            E++ HC+RDC  SK IW  +G +   F    D   W +  L GS+   F A LW+ W +R
Sbjct: 600  ESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEIWCKSGLIGSKAILFAAGLWWIWRSR 659

Query: 182  NAKCIGGEDIPLQKILRDVKIMEQAIARGFRFQHHTERTARWVTWHQSREDVVVLNVDGS 361
            NA+C+  E + LQ++  ++      I   F        + R+V W+ S  +  +LNVDGS
Sbjct: 660  NARCMSEESMLLQRLAANITYFVDDINSCFFQPLPVMVSDRYVKWNNSNFNCTILNVDGS 719

Query: 362  ADGSLGRAGFGGLLRQGDGAWMLGFYGSLGATSSL----LAVLFFGLQTAWDYGVRRLVC 529
              GS  RAGFGGL+R   G ++ GF G L ++S +    L  ++ G+ TA D G+  +  
Sbjct: 720  CIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELTAIYDGINTAIDMGITDMAV 779

Query: 530  YSDSSMALKLVRSSVNFRHCYAAWIGGVTELLR-RDWVVDLVHTLREGNRSADVLAKLKA 706
            YSDS +++ L+ ++ +  H +AA I  + + L  R++   L HTLREGN+SAD LAKL A
Sbjct: 780  YSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLRNF--SLNHTLREGNQSADYLAKLGA 837

Query: 707  S*TSKLIVVHSPPVEL 754
                 +++  SPP EL
Sbjct: 838  MSDVNVLIHQSPPDEL 853


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score =  149 bits (376), Expect = 7e-34
 Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
 Frame = +2

Query: 2   ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEGPRFVADLWYAWCAR 181
           ET +HCVRDC  S+ IW  +G T  +F  A     W +  +  S    F   LW+AW  R
Sbjct: 169 ETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRHR 228

Query: 182 NAKCIGGEDIPLQKILRDVKIMEQAIARGFRFQHHTERTARWVTWHQSREDVVVLNVDGS 361
           N  C+  E + L ++  ++      I   F  + +   + R+V W+       +LNVDGS
Sbjct: 229 NLMCLNNETMSLFRLCNNIVSAATYIKSAFDSEENVNHSDRFVKWNNRNHHDHILNVDGS 288

Query: 362 ADGSLGRAGFGGLLRQGDGAWMLGFYGSLGATSSL----LAVLFFGLQTAWDYGVRRLVC 529
             G+  R G+GG+LR   G ++ GF G +  ++ +    L  +   L    D  +  ++C
Sbjct: 289 CLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTAIHQSLHMVIDSNMNDVMC 348

Query: 530 YSDSSMALKLVRSSVNFRHCYAAWIGGVTELLR-RDWVVDLVHTLREGNRSADVLAKLKA 706
           YSDS +A+ L+ +     H YA  I  + +LL  R+  + L HTLREGN+ AD  AKL A
Sbjct: 349 YSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVRN--ITLHHTLREGNQCADFFAKLGA 406

Query: 707 S*TSKLIVVHSPPVEL 754
           +    L+V  SPP +L
Sbjct: 407 NSDVHLVVHQSPPADL 422


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score =  145 bits (367), Expect = 8e-33
 Identities = 89/228 (39%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
 Frame = +2

Query: 95  DFFTWQQRALDGSEGPRFVADLWYAWCARNAKCIGGEDIPLQKILRDVKIMEQAIARGFR 274
           D   W +  L     P  ++ LW+ W  RN  C+ G+ IP Q +  D+  M   IAR + 
Sbjct: 34  DSKAWLREVLK-ENSPLVMSTLWWVWRLRNVWCMEGKLIPWQVLRGDILAMFDDIARCYA 92

Query: 275 FQ----HHTERTARWVTWHQSREDVVVLNVDGSADGSLGRAGFGGLLRQGDGAWMLGFYG 442
                  HT R  RW        D VVLNVDGS  G+  R GFGG  R   G W+ GF+G
Sbjct: 93  VDVDAPMHTPRLVRWTV---GLADCVVLNVDGSVHGTPQRGGFGGCFRTIHGNWLRGFFG 149

Query: 443 SLGATSSL---LAVLFFGLQTAWDYGVRRLVCYSDSSMALKLVRSSVNFRHCYAAWIGGV 613
            L     L   L  +F GL  AW+ G R + C SDS  A+ LV+S+ +  H YAA +  +
Sbjct: 150 YLDECCILHLELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDI 209

Query: 614 TELLRRDWVVDLVHTLREGNRSADVLAKLKAS*TSKLIVVHSPPVELG 757
            +L  RDW+V+L HTLREGN  AD+L K  A     L++  +P   LG
Sbjct: 210 KDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGLG 257


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  144 bits (362), Expect = 3e-32
 Identities = 89/256 (34%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
 Frame = +2

Query: 2    ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEGPRFVADLWYAWCAR 181
            E+ +HCVRDC  S  IW  LG  +  F        W +    GS    F+A LW++W  R
Sbjct: 1026 ESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDWIRNFSSGSRAITFLAGLWWSWRHR 1085

Query: 182  NAKCIGGEDIPLQKILRDVKIMEQAIARGFRFQHHTE-RTARWVTWHQSREDVVVLNVDG 358
            N  C+  E  PL +I   +     AI   F   +  +  +AR V W+Q      +LNVDG
Sbjct: 1086 NLMCLSNETWPLTRISFRINDSINAIRSAFVKSNVIQPDSARMVKWNQGNHQCHILNVDG 1145

Query: 359  SADGSLGRAGFGGLLRQGDGAWMLGFYGSLGATSSL----LAVLFFGLQTAWDYGVRRLV 526
            S  G+  RAGFGG+ R   G ++ G+ G +  ++ +    L  L  GL  A + G+  L 
Sbjct: 1146 SCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLIMAAEMGIEELA 1205

Query: 527  CYSDSSMALKLVRSSVNFRHCYAAWIGGVTELLRRDWVVDLVHTLREGNRSADVLAKLKA 706
            CYSDS + + L+  + +  H YA  I  + +LL       + H  REGN+ AD LAKL A
Sbjct: 1206 CYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGNQCADYLAKLGA 1264

Query: 707  S*TSKLIVVHSPPVEL 754
            S   + +V  S   EL
Sbjct: 1265 SSNEECLVHASACQEL 1280


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score =  139 bits (350), Expect = 8e-31
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 5/256 (1%)
 Frame = +2

Query: 2   ETLMHCVRDCTLSKQIWGALGMTSMEFQQA-QDFFTWQQRALDGSEGPRFVADLWYAWCA 178
           ET +HCVRDC  SK +W   G T  +F  + +D   W +  + GS    F + +W  W  
Sbjct: 68  ETFLHCVRDCIHSKPLWHQSGFTHPDFFFSNEDIIDWIKNGVMGSGSFSFASTIWSTWRN 127

Query: 179 RNAKCIGGEDIPLQKILRDVKIMEQAIARGFRFQHHTERTARWVTWHQSREDVVVLNVDG 358
           RN  C+G E+    ++  +++ M   +   + +  ++      V W+ +    V+LNVD 
Sbjct: 128 RNMMCLGNENWSNAQLSFNIQGMIATLRACYPYNSNSTEEDNIVKWNNNNHSCVILNVDL 187

Query: 359 SADGSLGRAGFGGLLRQGDGAWMLGFYGSLGATSSL----LAVLFFGLQTAWDYGVRRLV 526
           S  GS  RAG+GG+LR     ++ GF G +  +S++    L  ++ GL  A + G   L 
Sbjct: 188 SCLGSPTRAGYGGVLRNYASFYLSGFSGYIQNSSNILFAELYAIYQGLLLAKNMGNSDLF 247

Query: 527 CYSDSSMALKLVRSSVNFRHCYAAWIGGVTELLRRDWVVDLVHTLREGNRSADVLAKLKA 706
           CYS+S   + ++   +   H YA  I  + ELL +   V + HTLR+GN+ AD LAKL A
Sbjct: 248 CYSNSLHCINILNGPLMRFHVYAVLIQDIKELLEQG-NVTMNHTLRKGNQCADFLAKLGA 306

Query: 707 S*TSKLIVVHSPPVEL 754
           S  S+ +   SPP +L
Sbjct: 307 SSNSEFLCYESPPTDL 322