BLASTX nr result

ID: Glycyrrhiza24_contig00010678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010678
         (1513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   612   e-173
ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   605   e-171
ref|XP_003610450.1| 5'-tyrosyl-DNA phosphodiesterase [Medicago t...   604   e-170
gb|AFK35048.1| unknown [Lotus japonicus]                              601   e-169
ref|NP_001242502.1| uncharacterized protein LOC100776602 [Glycin...   593   e-167

>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
            max]
          Length = 402

 Score =  612 bits (1578), Expect = e-173
 Identities = 310/415 (74%), Positives = 330/415 (79%), Gaps = 5/415 (1%)
 Frame = -3

Query: 1508 WACKNCTFLNPPSQKSECQICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSCKACT 1329
            WACK CTF+N PSQK EC+IC                               KWSCKACT
Sbjct: 4    WACKKCTFVNLPSQKGECEICFSPASPLSMGPSCSSSPP-------------KWSCKACT 50

Query: 1328 LFNSYKNSTCHLCGTRSPVLSLSNLHDLND-TDHDSSVGSVFFPLRPC-KRKAIVDDDPS 1155
              N Y N +C +C TR  VLSLSNL DLND TDHDSSVGSVFFPLR C KRKAI DDD S
Sbjct: 51   FLNPYNNPSCEVCATRCSVLSLSNLTDLNDATDHDSSVGSVFFPLRTCNKRKAIDDDDSS 110

Query: 1154 AQPPYAAK-LNLT--ENNDSGNDFGSLKILSYNVWFREDLELHKRMKAIGDLVQLHSPDF 984
                +  K  N+T  EN D+G  F   KILSYNVWFREDLELHKRMKAIGDLVQLHSPDF
Sbjct: 111  EVINFKVKPSNITGDENIDTGKAF---KILSYNVWFREDLELHKRMKAIGDLVQLHSPDF 167

Query: 983  ICFQEVTPNIYDIFKQFTWWNVYHCSVSSEMAYSRPYFCMLLSKLPVKSFRSKSFSNSIM 804
            ICFQEVTPNIYDIFK   WW+VY CSVSSEMAYSRPYFCMLLSKLPVKSF +K FSNSIM
Sbjct: 168  ICFQEVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIM 227

Query: 803  GRELCIAEVEAASGKSLVVATSHLESPSPAPPKWDQMYSKERVEQAKEALNLLKKHPNVV 624
            GRELCIAEVEAASGK LV+ATSHLESP PAPPKWDQMYSKERV QA EA+NLLKK P+VV
Sbjct: 228  GRELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQMYSKERVVQANEAINLLKKQPSVV 287

Query: 623  FGGDMNWDDKLDGQYPLQDGWIDAWSVLRPNEVGWTYDTKSNQMLMGNRTLQKRLDRFVC 444
            FGGDMNW+D+ DGQYPLQDGW+DAWS LRPNE GWTYDTKSNQML GNRTLQKRLDRF+C
Sbjct: 288  FGGDMNWNDQQDGQYPLQDGWVDAWSQLRPNESGWTYDTKSNQMLTGNRTLQKRLDRFIC 347

Query: 443  HFHDLKISSIDMVGMDAIPGVLYNKEKKARKEIKQLVLPVLPSDHYGLLLTISSK 279
             F D KI+S+DM+GM+AIPGV YNKEKK RKEIKQLVLPVLPSDHYGLLLTISSK
Sbjct: 348  QFTDFKITSVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPVLPSDHYGLLLTISSK 402


>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
            max]
          Length = 401

 Score =  605 bits (1561), Expect = e-171
 Identities = 305/413 (73%), Positives = 327/413 (79%), Gaps = 3/413 (0%)
 Frame = -3

Query: 1508 WACKNCTFLNPPSQKSECQICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSCKACT 1329
            WACK CTF+N PSQK EC+IC                               KWSCKACT
Sbjct: 4    WACKKCTFVNLPSQKGECEICFSPASPLSMGPSCSSSPP-------------KWSCKACT 50

Query: 1328 LFNSYKNSTCHLCGTRSPVLSLSNLHDLND-TDHDSSVGSVFFPLRPC-KRKAIVDDDPS 1155
              N Y N +C +C TR  VLSLSNL DLND TDHDSSVGSVFFPLR C KRKAI DDD S
Sbjct: 51   FLNPYNNPSCEVCATRCSVLSLSNLTDLNDATDHDSSVGSVFFPLRTCNKRKAIDDDDSS 110

Query: 1154 AQPPYAAK-LNLTENNDSGNDFGSLKILSYNVWFREDLELHKRMKAIGDLVQLHSPDFIC 978
                +  K  N+T + +  +     KILSYNVWFREDLELHKRMKAIGDLVQLHSPDFIC
Sbjct: 111  EVINFKVKPSNITGDGERVSI--PFKILSYNVWFREDLELHKRMKAIGDLVQLHSPDFIC 168

Query: 977  FQEVTPNIYDIFKQFTWWNVYHCSVSSEMAYSRPYFCMLLSKLPVKSFRSKSFSNSIMGR 798
            FQEVTPNIYDIFK   WW+VY CSVSSEMAYSRPYFCMLLSKLPVKSF +K FSNSIMGR
Sbjct: 169  FQEVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGR 228

Query: 797  ELCIAEVEAASGKSLVVATSHLESPSPAPPKWDQMYSKERVEQAKEALNLLKKHPNVVFG 618
            ELCIAEVEAASGK LV+ATSHLESP PAPPKWDQMYSKERV QA EA+NLLKK P+VVFG
Sbjct: 229  ELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQMYSKERVVQANEAINLLKKQPSVVFG 288

Query: 617  GDMNWDDKLDGQYPLQDGWIDAWSVLRPNEVGWTYDTKSNQMLMGNRTLQKRLDRFVCHF 438
            GDMNW+D+ DGQYPLQDGW+DAWS LRPNE GWTYDTKSNQML GNRTLQKRLDRF+C F
Sbjct: 289  GDMNWNDQQDGQYPLQDGWVDAWSQLRPNESGWTYDTKSNQMLTGNRTLQKRLDRFICQF 348

Query: 437  HDLKISSIDMVGMDAIPGVLYNKEKKARKEIKQLVLPVLPSDHYGLLLTISSK 279
             D KI+S+DM+GM+AIPGV YNKEKK RKEIKQLVLPVLPSDHYGLLLTISSK
Sbjct: 349  TDFKITSVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPVLPSDHYGLLLTISSK 401


>ref|XP_003610450.1| 5'-tyrosyl-DNA phosphodiesterase [Medicago truncatula]
            gi|355511505|gb|AES92647.1| 5'-tyrosyl-DNA
            phosphodiesterase [Medicago truncatula]
          Length = 437

 Score =  604 bits (1558), Expect = e-170
 Identities = 304/447 (68%), Positives = 328/447 (73%), Gaps = 36/447 (8%)
 Frame = -3

Query: 1511 SWACKNCTFLNPPSQKSECQICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSCKAC 1332
            SW+CK CTF+NPPSQ SEC+IC                               KWSCK+C
Sbjct: 2    SWSCKKCTFVNPPSQISECEICFSSPPHPSSSSATSSSSSSP-----------KWSCKSC 50

Query: 1331 TLFNSYKNSTCHLCGTRSPVLSLSNLHDLNDTDHDSSVGSVFFPLRPCKRKAIVDDDPSA 1152
            TLFNSYKN  CHLCGTR+ VLS+S+ +D+ND D DSSVGSVF+PLR CKRKA+   + S 
Sbjct: 51   TLFNSYKNPICHLCGTRNTVLSISSFNDINDIDDDSSVGSVFWPLRSCKRKAVDSLEDSV 110

Query: 1151 QP---------------------PYAAK---------------LNLTENNDSGNDFGSLK 1080
            QP                     P  AK                   E  DSG    SLK
Sbjct: 111  QPLVAKESKKAIDFVDFSEDFDQPLKAKDSKRAVDIFDSYEHFAKPLERVDSGKGVSSLK 170

Query: 1079 ILSYNVWFREDLELHKRMKAIGDLVQLHSPDFICFQEVTPNIYDIFKQFTWWNVYHCSVS 900
            ILSYNVWFREDLEL KRMKAIGDLV +HSPDFICFQEVT +IYDIFK  TWWNVYHCSVS
Sbjct: 171  ILSYNVWFREDLELEKRMKAIGDLVLMHSPDFICFQEVTRDIYDIFKLSTWWNVYHCSVS 230

Query: 899  SEMAYSRPYFCMLLSKLPVKSFRSKSFSNSIMGRELCIAEVEAASGKSLVVATSHLESPS 720
            SE AYS+ Y+CMLLSKLPVKSF +KSFSNSIMGRELCIAEVE   GKS VVATSHLESP 
Sbjct: 231  SEKAYSKAYYCMLLSKLPVKSFSAKSFSNSIMGRELCIAEVEDVGGKSFVVATSHLESPC 290

Query: 719  PAPPKWDQMYSKERVEQAKEALNLLKKHPNVVFGGDMNWDDKLDGQYPLQDGWIDAWSVL 540
            PAPPKWDQM+SKERVEQA EALN+LK+HPNVVFGGDMNWDDK DGQYPLQDGW+DAWSVL
Sbjct: 291  PAPPKWDQMFSKERVEQANEALNILKRHPNVVFGGDMNWDDKKDGQYPLQDGWLDAWSVL 350

Query: 539  RPNEVGWTYDTKSNQMLMGNRTLQKRLDRFVCHFHDLKISSIDMVGMDAIPGVLYNKEKK 360
            RPNE GWTYDTKSNQML GNRTLQKRLDRFVC   D KIS+IDM+GMD IPGV YNKEKK
Sbjct: 351  RPNEAGWTYDTKSNQMLTGNRTLQKRLDRFVCRLRDFKISNIDMIGMDEIPGVSYNKEKK 410

Query: 359  ARKEIKQLVLPVLPSDHYGLLLTISSK 279
             R EIKQLV PVLPSDHYGLLLT+SSK
Sbjct: 411  VRGEIKQLVCPVLPSDHYGLLLTLSSK 437


>gb|AFK35048.1| unknown [Lotus japonicus]
          Length = 467

 Score =  601 bits (1550), Expect = e-169
 Identities = 308/435 (70%), Positives = 327/435 (75%), Gaps = 24/435 (5%)
 Frame = -3

Query: 1511 SWACKNCTFLNPPSQKSECQICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSCKAC 1332
            SW+C  CTFLNPPSQKS+CQIC                               KWSCKAC
Sbjct: 46   SWSCIKCTFLNPPSQKSQCQICSSSPPPSPPPSSSSSSPP-------------KWSCKAC 92

Query: 1331 TLFNSYKNSTCHLCGTRSPVLSLSNLHDL----NDTDHDSSVGSVFFPLRPCKRKAIVDD 1164
            TL N YKNSTC LCGTRSPVLSLSN + L    +D D DSSVGSVFFPLR CKRK    D
Sbjct: 93   TLLNPYKNSTCELCGTRSPVLSLSNSNLLQLSDDDDDRDSSVGSVFFPLRSCKRKFDSLD 152

Query: 1163 DPSAQPPYAAKLNLTENND-------------------SGNDFG-SLKILSYNVWFREDL 1044
                     A  N  +  D                   SG D G SLKILSYNVWFREDL
Sbjct: 153  HAQPSTVTTASSNKKKTIDFTVSVASGKDVASSMKILSSGKDVGTSLKILSYNVWFREDL 212

Query: 1043 ELHKRMKAIGDLVQLHSPDFICFQEVTPNIYDIFKQFTWWNVYHCSVSSEMAYSRPYFCM 864
            E  KRMKAIGDLV LHSPD ICFQEVTPNIYDIFK+ TWW+VY CSVS++ AYSRPYFCM
Sbjct: 213  EPQKRMKAIGDLVHLHSPDLICFQEVTPNIYDIFKKSTWWSVYQCSVSADKAYSRPYFCM 272

Query: 863  LLSKLPVKSFRSKSFSNSIMGRELCIAEVEAASGKSLVVATSHLESPSPAPPKWDQMYSK 684
            LLSKLPVKSF +KSFSNSIMGRELCIAEVEAA+GKSLV+ATSHLESP P PPKWDQMYSK
Sbjct: 273  LLSKLPVKSFSNKSFSNSIMGRELCIAEVEAANGKSLVIATSHLESPCPGPPKWDQMYSK 332

Query: 683  ERVEQAKEALNLLKKHPNVVFGGDMNWDDKLDGQYPLQDGWIDAWSVLRPNEVGWTYDTK 504
            ERVEQA EA+NLLKKHPNVVFGGDMNWDDKLDGQYP QDGWIDAWS LRP++ GWTYDTK
Sbjct: 333  ERVEQANEAVNLLKKHPNVVFGGDMNWDDKLDGQYPSQDGWIDAWSQLRPDQSGWTYDTK 392

Query: 503  SNQMLMGNRTLQKRLDRFVCHFHDLKISSIDMVGMDAIPGVLYNKEKKARKEIKQLVLPV 324
            SNQML GNRTLQKRLDRF+C   DLKISSIDM+GMDAIPG+ Y KEKK RKE KQLVLPV
Sbjct: 393  SNQMLSGNRTLQKRLDRFICRLSDLKISSIDMIGMDAIPGLSYIKEKKVRKETKQLVLPV 452

Query: 323  LPSDHYGLLLTISSK 279
            LPSDHYGLLLTI+SK
Sbjct: 453  LPSDHYGLLLTITSK 467


>ref|NP_001242502.1| uncharacterized protein LOC100776602 [Glycine max]
            gi|255637077|gb|ACU18870.1| unknown [Glycine max]
          Length = 393

 Score =  593 bits (1529), Expect = e-167
 Identities = 294/408 (72%), Positives = 318/408 (77%), Gaps = 7/408 (1%)
 Frame = -3

Query: 1511 SWACKNCTFLNPPSQKSECQICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSCKAC 1332
            SWACK CTF+NPPSQK EC+IC                               KWSCKAC
Sbjct: 2    SWACKKCTFVNPPSQKGECEICFSPASPSASGPSSSSSPP-------------KWSCKAC 48

Query: 1331 TLFNSYKNSTCHLCGTRSPVLSLSNLHDLND-TDHDSSVGSVFFPLRPCK-RKAIVDDDP 1158
            T  N Y N +C +CGTR PVLSLSNL DLND TDHDSSVGSVFFPLR CK RKAI DDD 
Sbjct: 49   TFLNPYNNPSCEVCGTRCPVLSLSNLTDLNDATDHDSSVGSVFFPLRTCKKRKAIDDDDD 108

Query: 1157 SAQPPY-----AAKLNLTENNDSGNDFGSLKILSYNVWFREDLELHKRMKAIGDLVQLHS 993
            S++        A  +   EN DSG  F   KILSYNVWFREDLELHKRMKAIGDLVQ HS
Sbjct: 109  SSEVKVKPSDKATDITGDENIDSGKAF---KILSYNVWFREDLELHKRMKAIGDLVQFHS 165

Query: 992  PDFICFQEVTPNIYDIFKQFTWWNVYHCSVSSEMAYSRPYFCMLLSKLPVKSFRSKSFSN 813
            PDFICFQEVTPNIYDIFK+ TWW+ Y CSVSSEM YSRPYFCM+LSKLPVKSF  K FSN
Sbjct: 166  PDFICFQEVTPNIYDIFKRSTWWSGYRCSVSSEMDYSRPYFCMVLSKLPVKSFSKKPFSN 225

Query: 812  SIMGRELCIAEVEAASGKSLVVATSHLESPSPAPPKWDQMYSKERVEQAKEALNLLKKHP 633
            SIMGRELCIAEVEAA G SLV+ATSHLESPSP PPKWDQM+SKERV QA EA+NLLKK P
Sbjct: 226  SIMGRELCIAEVEAARGTSLVIATSHLESPSPGPPKWDQMFSKERVVQANEAINLLKKQP 285

Query: 632  NVVFGGDMNWDDKLDGQYPLQDGWIDAWSVLRPNEVGWTYDTKSNQMLMGNRTLQKRLDR 453
            NVVFGGDMNW+D LDGQYPLQDGW+DAWS LRPN+ GWTYDTK+NQML GNRT+QKRLDR
Sbjct: 286  NVVFGGDMNWNDNLDGQYPLQDGWVDAWSQLRPNKNGWTYDTKANQMLTGNRTVQKRLDR 345

Query: 452  FVCHFHDLKISSIDMVGMDAIPGVLYNKEKKARKEIKQLVLPVLPSDH 309
            F+C   D KI+ +DM+GM+AIPGV YNKEKK RKEIKQLVLP+LPSDH
Sbjct: 346  FICRLTDFKITGVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPILPSDH 393


Top