BLASTX nr result
ID: Glycyrrhiza24_contig00010668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00010668
(3566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 1872 0.0
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein... 1867 0.0
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 1681 0.0
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein... 1595 0.0
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 1549 0.0
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 1872 bits (4850), Expect = 0.0
Identities = 955/1089 (87%), Positives = 985/1089 (90%), Gaps = 1/1089 (0%)
Frame = +1
Query: 46 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 225
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQ+R
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60
Query: 226 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 405
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 406 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 585
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGD DNVPALLGQACVEFNRGR+SD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180
Query: 586 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 765
SLELYKR LQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVE+L+ALAIM
Sbjct: 181 SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240
Query: 766 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 945
DLRTNEA+GI GMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
Query: 946 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1125
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKE++KPHEFVFPYYGLGQVQIKLGDF+S
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360
Query: 1126 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1305
ALSNFEKVLEVYPDNCETLKALG+IYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
Sbjct: 361 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420
Query: 1306 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1485
ILSDTGAALDAFKTA TLFKKGGQEVPIELLNNIGVLQFERGEFELA+QTFKEALGDG+W
Sbjct: 421 ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480
Query: 1486 LSFINEENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNKS 1665
LSFINEENKSS DA+TSTLQFKDMQLFH LESNGHHVEVPWDKVTVLFNLARLLEQL S
Sbjct: 481 LSFINEENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDS 540
Query: 1666 GTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLGE 1845
GTASI YRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVN+KCPNALSMLGE
Sbjct: 541 GTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 600
Query: 1846 LELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 2025
LELKNDDWVKAKE+LR ASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK
Sbjct: 601 LELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 660
Query: 2026 ELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 2205
EL TRVLIQHS+NLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
Sbjct: 661 ELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 720
Query: 2206 HVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLAP 2385
HVYFAQGNF+LAVKMYQNCLRKFY+NTDSQILLY ARTHYEAEQWQDCIKTLLRAIHLAP
Sbjct: 721 HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 780
Query: 2386 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGFD 2565
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVR+FSQLSAASNLHIHGFD
Sbjct: 781 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 840
Query: 2566 EKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQM 2745
EKKIDTHVGYCNHLLSAAKVH KFQM
Sbjct: 841 EKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQM 900
Query: 2746 ERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERSXXXXXXXXXXXXXXXXXXXXXX 2925
ERRKQEDE+KRVQ+QEEHF+RVKEQWKSS+HSKRRERS
Sbjct: 901 ERRKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRERSDDEEGGTGEKKRKKGGKRRKKD 960
Query: 2926 XHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVNDDVEENAQGLLAAVGLEDSD 3105
HSK Y INY+EE QT +NDD EENAQGLLAA GLEDSD
Sbjct: 961 KHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDSD 1020
Query: 3106 VDDETAAPSSTIARRRQALSESDDDEP-LQRQSSPIRENSADMQESDGEIRDGGDKTNGG 3282
D+ETAAPSS+IARRRQALSESDDDEP LQRQSSP+R+NSADMQ SDGEIRD GDKTNG
Sbjct: 1021 ADEETAAPSSSIARRRQALSESDDDEPLLQRQSSPVRQNSADMQLSDGEIRD-GDKTNGD 1079
Query: 3283 DTSDEEKQY 3309
D +DEEKQY
Sbjct: 1080 DGNDEEKQY 1088
>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1086
Score = 1867 bits (4835), Expect = 0.0
Identities = 958/1090 (87%), Positives = 985/1090 (90%), Gaps = 2/1090 (0%)
Frame = +1
Query: 46 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 225
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIDQFR
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60
Query: 226 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 405
QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 406 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 585
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180
Query: 586 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 765
SLELYKRAL VYP+CPAAVRLGIGLCRYKLGQFEKAQQAFER LDPENVEALVALAIM
Sbjct: 181 SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237
Query: 766 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 945
DLRTNEA+GI GMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297
Query: 946 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1125
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKE++KPHEFVFPYYGLGQVQIKLGDF+S
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357
Query: 1126 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1305
ALSNFEKVLEVYPDNCETLKALG+IYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417
Query: 1306 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1485
ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDG+W
Sbjct: 418 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477
Query: 1486 LSFINEENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNKS 1665
LSFINEE KSS DA+TSTLQFKDM+LFH LESNGHHVEVPWDKVTVLFNLARLLEQLN S
Sbjct: 478 LSFINEEKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDS 537
Query: 1666 GTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLGE 1845
GTASILYRL+LFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVN+KCPNALSMLGE
Sbjct: 538 GTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 597
Query: 1846 LELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 2025
LELKNDDWVKAKE+LRAASDAT+GKDSYA+LSLGNWNYFAAVRNEKRNPKLEATHLEKAK
Sbjct: 598 LELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 657
Query: 2026 ELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 2205
ELYTRVLIQHS+NLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
Sbjct: 658 ELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 717
Query: 2206 HVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLAP 2385
HVYFAQGNF+LAVKMYQNCLRKFY+NTDSQILLY ARTHYEAEQWQDCIKTLLRAIHLAP
Sbjct: 718 HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 777
Query: 2386 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGFD 2565
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVR+FSQLSAASNLHIHGFD
Sbjct: 778 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 837
Query: 2566 EKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQM 2745
EKKIDTHVGYCNHLLSAAKVH KFQM
Sbjct: 838 EKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQM 897
Query: 2746 ERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERS-XXXXXXXXXXXXXXXXXXXXX 2922
ERRKQEDE+KRVQQQEEHF+RVKEQWKSS+HSKRRERS
Sbjct: 898 ERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRERSDDEEGGGTGEKKRKKGGKRRKK 957
Query: 2923 XXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVNDDVEENAQGLLAAVGLEDS 3102
HSKS Y INY+EE QT +NDD EENAQGLLAA GLEDS
Sbjct: 958 DKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDS 1017
Query: 3103 DVDDETAAPSSTIARRRQALSESDDDEPL-QRQSSPIRENSADMQESDGEIRDGGDKTNG 3279
D D+E APSS+IARRRQALSESDDDEPL QRQSSP RENSADMQ SDGEIRD GDKTNG
Sbjct: 1018 DADEEAPAPSSSIARRRQALSESDDDEPLIQRQSSPARENSADMQLSDGEIRD-GDKTNG 1076
Query: 3280 GDTSDEEKQY 3309
D S+EEKQY
Sbjct: 1077 DDGSEEEKQY 1086
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 1681 bits (4353), Expect = 0.0
Identities = 862/1091 (79%), Positives = 935/1091 (85%), Gaps = 6/1091 (0%)
Frame = +1
Query: 46 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 225
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60
Query: 226 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 405
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 406 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 585
SRIDMHE STWVGKGQLLLAKG+VEQA AAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180
Query: 586 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 765
SL+LYKRALQVYP+CPAAVR+GIGLC YKLGQFEKA++AF+RVLQLDPENVEALVAL IM
Sbjct: 181 SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240
Query: 766 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 945
DL TN+ASGI KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
Query: 946 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1125
GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE +KPH+FV PYYGLGQVQ+KLGDFRS
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360
Query: 1126 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1305
+LSNFEKVLEVYP+NCE LKALG+IYVQLGQT+K Q+++RKATKIDPRDAQAFL+LGELL
Sbjct: 361 SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420
Query: 1306 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1485
I SDTGAALDAFKTAR L KKGG+EVPIELLNNIGVL FERGEFELA+QTFKEA+GDGIW
Sbjct: 421 ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480
Query: 1486 LSFINEENKS-SFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1662
LSFI+++ S + DA TS FKDMQLFH LE +GH VE+PW+KVTVLFNLARLLEQLN
Sbjct: 481 LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540
Query: 1663 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 1842
+ TASILYRLILFK+PDYIDAYLRLAAIAKARNNI LSIELV DALKVNDK PN+L MLG
Sbjct: 541 TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600
Query: 1843 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2022
+LELKNDDWVKAKE+ R+ASDATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601 DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660
Query: 2023 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2202
KELYTRVL+QH+ANLYAANGA VVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL
Sbjct: 661 KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720
Query: 2203 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2382
AHVYFAQGNF+LAVKMYQNCLRKFYYNTDSQ+LLY ARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 721 AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780
Query: 2383 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2562
PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRIFSQLSAASNLH HGF
Sbjct: 781 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840
Query: 2563 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2742
DEKKI+THVGYC HLL AAKVH KFQ
Sbjct: 841 DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900
Query: 2743 MERRKQEDEIKRVQQQEEHFKRVKEQWKSST-HSKRRERSXXXXXXXXXXXXXXXXXXXX 2919
+ERRKQEDE+KRV QQE+HF+RVKEQWKS+ +SKR+ERS
Sbjct: 901 LERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKR 960
Query: 2920 XXXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEA--QTNVNDDVEENAQGLLAAVGL 3093
+ +N++E N +DD E++AQ LLAA GL
Sbjct: 961 RKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAAGL 1020
Query: 3094 EDSDVDDETAAPSSTIARRRQALSESDDDEPLQR--QSSPIRENSADMQESDGEIRDGGD 3267
EDSD +D+ A PSS RR++A SESD+DEP + +SSP+RENSA++QESDGEI+D D
Sbjct: 1021 EDSDAEDDMAGPSSG-NRRKRAWSESDEDEPQDQRPESSPVRENSAEVQESDGEIKDDND 1079
Query: 3268 KTNGGDTSDEE 3300
K NG D+E
Sbjct: 1080 KPNGDAAEDDE 1090
>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
sativus]
Length = 1074
Score = 1595 bits (4131), Expect = 0.0
Identities = 821/1078 (76%), Positives = 896/1078 (83%), Gaps = 8/1078 (0%)
Frame = +1
Query: 46 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 225
MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1 MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60
Query: 226 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 405
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 406 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 585
SRIDMHEPSTWVGKGQLLL KGEVEQA AAFKIVLDGDRDNVPALLGQACVEFNRG YS+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180
Query: 586 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 765
SLELYKRALQVYP+CPAAVRLGIGLCRY+L Q+ KAQQAFER LDPENVEALV LAI+
Sbjct: 181 SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237
Query: 766 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 945
DL TNEA I GM KMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 238 DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297
Query: 946 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1125
GPTKSHS+YNLARSYHSKGDY+KAG+YYMAS KE +KP EFVFPYYGLGQVQ+K+GD RS
Sbjct: 298 GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357
Query: 1126 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1305
ALSNFEKVLEVYPDNCETLK LG+IYVQLGQ +K Q+ +RKATKIDPRDAQAFL+LGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417
Query: 1306 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1485
I +D AALDAFKTA L KKGGQEVPIE+LNN+GVL FER EFELA++ FKEALGDGIW
Sbjct: 418 ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477
Query: 1486 LSFINEENKS-SFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1662
L FI+ + + + +AS S LQ+KD++LF+ LE G + +PW KVT LFNLARLLEQL++
Sbjct: 478 LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537
Query: 1663 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 1842
+S+LYRLILFKYPDY+DAYLRLA+IAKARN + LSIELVNDALKVNDKC NALSMLG
Sbjct: 538 IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597
Query: 1843 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2022
ELELKNDDWV+AKE+ RAA +ATDGKDSYATLSLGNWNYFAA+RNEKRNPKLEATHLEK+
Sbjct: 598 ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 657
Query: 2023 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2202
KELYTRVL+QH ANLYAANGA V+LAEKG FDVSKDIFTQVQEAASG++FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 717
Query: 2203 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2382
AHVYFAQGNFSLAVKMYQNCLRKFYYNTD QILLY ART+YEAEQWQDC KTLLRAIHLA
Sbjct: 718 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 777
Query: 2383 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2562
PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVR+FSQLSAASNLH HGF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 837
Query: 2563 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2742
DEKKIDTHVGYC HLL AA VH KFQ
Sbjct: 838 DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 897
Query: 2743 MERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERS--XXXXXXXXXXXXXXXXXXX 2916
+ERRK EDE KR+ QQE+HFKRVKEQWKS T +KRRERS
Sbjct: 898 LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRR 957
Query: 2917 XXXXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVN---DDVEENAQGLLAAV 3087
KSHY I+Y+ E+++ VN DD E N Q LA
Sbjct: 958 KKDRKGKSHYETEEADNDMMDDQELYNEDNNISYR-ESRSQVNDQGDDFEGNDQDALAEA 1016
Query: 3088 GLEDSDVDDETAAPSSTIARRRQALSESDDDEPL--QRQSSPIRENSADMQESDGEIR 3255
GLEDSD +DE APSS ARRR S+S++DEP+ QR+S RENSA +++SDGEIR
Sbjct: 1017 GLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1074
>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
gi|222833309|gb|EEE71786.1| PAF1 complex component
[Populus trichocarpa]
Length = 1056
Score = 1549 bits (4011), Expect = 0.0
Identities = 800/1057 (75%), Positives = 883/1057 (83%), Gaps = 6/1057 (0%)
Frame = +1
Query: 46 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 225
MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+DQFR
Sbjct: 1 MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60
Query: 226 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 405
QILEEGSS EID+YYADVRYERIAILNALGAYYSYLGK+ETKQREKEE+FI AT++YNKA
Sbjct: 61 QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120
Query: 406 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 585
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAF+IVL+GDRDNV ALLGQACVE++RG Y +
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180
Query: 586 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 765
SL L+KRALQVYP+CP AVRLGIG C YKLG KA AF+R LDPENVEALV+LAI+
Sbjct: 181 SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237
Query: 766 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 945
DL+TNEA+ I KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297
Query: 946 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1125
GPTKSHSYYNLARSYHSKGDY+ A YY ASVKEI+KP EFVFPYYGLGQVQ+KLG+ ++
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357
Query: 1126 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1305
ALSNFEKVLEVYPDNCETLK LG+IYVQLGQT+K Q+F+RKA KIDPRDAQAFL+LGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417
Query: 1306 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1485
I +DTGAALDAFKTAR+L KKGG+EVPIE+LNNI V+ FER E ELA Q FKEALGDGIW
Sbjct: 418 ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477
Query: 1486 LSFIN-EENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1662
L+F+ + N DA++S LQ+KDMQ+F LE GH VE+ W+KVT LFNLARLLEQL+
Sbjct: 478 LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537
Query: 1663 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 1842
+ TAS LYRLILFKYPDY+DAYLRLAAIAKARNN+ LSIELVN+AL VNDKCPNALSMLG
Sbjct: 538 TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597
Query: 1843 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2022
+LELKNDDWVKAKE+ RAAS+ATDGKDSYATLSLGNWNYFAA+RNEKRNPKLEATHLEKA
Sbjct: 598 DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 657
Query: 2023 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2202
KELYTRVL+QH+ANLYAANGA VVLAEKGHFDVSKD+FTQVQEAASGS+FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 717
Query: 2203 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2382
AHVYFAQGNF+LAVKMYQNCL+KF+YNTDSQILLY ARTHYEAEQWQDC +TLLRAIHL
Sbjct: 718 AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 777
Query: 2383 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2562
PSNYTLRFDAGVAMQKFSASTLQK KRT DEVR+TV EL+NAVR+FSQLSAASNL+ +GF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 837
Query: 2563 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2742
DEKKI+THV YC HLL AA VH KFQ
Sbjct: 838 DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 897
Query: 2743 MERRKQEDEIKRVQQQEEHFKRVKEQWKSSTH-SKRRERSXXXXXXXXXXXXXXXXXXXX 2919
+ERRKQEDE+KRV+QQEEHF+RVKEQWKSST SKRR+R+
Sbjct: 898 LERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKR 957
Query: 2920 XXXH--SKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEA-QTNVNDD-VEENAQGLLAAV 3087
S+S Y +N++E Q N DD EENAQ +LAA
Sbjct: 958 RKKEKSSRSRY-EMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEENAQDVLAAA 1016
Query: 3088 GLEDSDVDDETAAPSSTIARRRQALSESDDDEPLQRQ 3198
GLEDSD DD+ AAPSS RR++A SESD+DE +R+
Sbjct: 1017 GLEDSDADDDAAAPSSA-GRRKRAWSESDEDEISERK 1052