BLASTX nr result

ID: Glycyrrhiza24_contig00010599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010599
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBS...   380   e-103
ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycin...   370   e-100
gb|AFK41974.1| unknown [Medicago truncatula]                          352   9e-95
ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arab...   269   1e-69
ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBS...   268   3e-69

>ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Glycine max]
          Length = 225

 Score =  380 bits (976), Expect = e-103
 Identities = 196/226 (86%), Positives = 213/226 (94%), Gaps = 2/226 (0%)
 Frame = +3

Query: 213 MSSIHLINTLGVPLRSLAP-SLFPQCHSPL-PSSAVPKRRRFSHSAGFRIVSGPTVNSVP 386
           MSSIHL+NTL VPLRS +P SLFPQCHSPL  SSAVPKRRRFS+S+GFR+ S  TVNSVP
Sbjct: 1   MSSIHLLNTLAVPLRSFSPPSLFPQCHSPLRSSSAVPKRRRFSNSSGFRLASSQTVNSVP 60

Query: 387 RGNGTYTVADFMTKKQNLHVVKTTTTVDEALEALVSNRISGLPVIDDDWNLVGVVSDYDL 566
           R NGTYTV+DFMTKKQ+LHVVKTTTTVDEALEALV+NRISGLPVID+DWNLVGVVSDYDL
Sbjct: 61  RANGTYTVSDFMTKKQDLHVVKTTTTVDEALEALVNNRISGLPVIDEDWNLVGVVSDYDL 120

Query: 567 LAIDTISGGTQRQGDANLFPDVDSSWQTFNEIQKLLSKTNGKVVGDLMTPTPLVVHESTN 746
           LAID+ISGG Q   DANLFPDVDS+W+TFNE+QKLLSKTNG+VVGDLMTPTPLVVHEST+
Sbjct: 121 LAIDSISGGPQ--SDANLFPDVDSTWKTFNELQKLLSKTNGQVVGDLMTPTPLVVHESTS 178

Query: 747 LEDAARLLLETKYRRLPVVDEDGKLVGLITRGNIVKAALLSKRAGE 884
           LE+AARLLLETKYRRLPVVD+DGKLVGLITRGNIVKAALLSKRAGE
Sbjct: 179 LEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLSKRAGE 224


>ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycine max]
           gi|255647096|gb|ACU24016.1| unknown [Glycine max]
          Length = 222

 Score =  370 bits (951), Expect = e-100
 Identities = 190/224 (84%), Positives = 208/224 (92%), Gaps = 1/224 (0%)
 Frame = +3

Query: 213 MSSIHLINTLGVPLRSLAP-SLFPQCHSPLPSSAVPKRRRFSHSAGFRIVSGPTVNSVPR 389
           M+SIHLINTL  PLRS +P SLFPQCHSPL SSA PKRRRF++S+GFR+ S  TVNSVPR
Sbjct: 1   MTSIHLINTLAAPLRSFSPPSLFPQCHSPLRSSAAPKRRRFANSSGFRLASSQTVNSVPR 60

Query: 390 GNGTYTVADFMTKKQNLHVVKTTTTVDEALEALVSNRISGLPVIDDDWNLVGVVSDYDLL 569
           GNGTYTVADF TKKQ+LHVVKTTTTVDEALEALV+ RISGLPVID+ WNLVGVVSDYDLL
Sbjct: 61  GNGTYTVADFATKKQDLHVVKTTTTVDEALEALVNYRISGLPVIDEVWNLVGVVSDYDLL 120

Query: 570 AIDTISGGTQRQGDANLFPDVDSSWQTFNEIQKLLSKTNGKVVGDLMTPTPLVVHESTNL 749
           AID+ISGG   Q DANLFP+VDS+W+TFNE+QKLLSKTNG+VVGDLMTPTPLVVHEST+L
Sbjct: 121 AIDSISGGP--QSDANLFPNVDSTWKTFNELQKLLSKTNGQVVGDLMTPTPLVVHESTSL 178

Query: 750 EDAARLLLETKYRRLPVVDEDGKLVGLITRGNIVKAALLSKRAG 881
           E+AARLLLETKYRRLPVVD+DGKLVGLITRGNIVKAALLSKRAG
Sbjct: 179 EEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLSKRAG 222


>gb|AFK41974.1| unknown [Medicago truncatula]
          Length = 221

 Score =  352 bits (904), Expect = 9e-95
 Identities = 183/225 (81%), Positives = 200/225 (88%)
 Frame = +3

Query: 213 MSSIHLINTLGVPLRSLAPSLFPQCHSPLPSSAVPKRRRFSHSAGFRIVSGPTVNSVPRG 392
           MSSIHLINTL  PL +    + P CHS LPSS +PKR RF+ SA F +VS  TVNSVPR 
Sbjct: 1   MSSIHLINTL--PLSTPHRIILPHCHSLLPSSVLPKRHRFAQSARFSVVSSQTVNSVPRA 58

Query: 393 NGTYTVADFMTKKQNLHVVKTTTTVDEALEALVSNRISGLPVIDDDWNLVGVVSDYDLLA 572
           NGTYTV+DFMTKK NLHVVKTTT+VDEALEALV NRISGLPVID++WNLVGVVSDYDLLA
Sbjct: 59  NGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGVVSDYDLLA 118

Query: 573 IDTISGGTQRQGDANLFPDVDSSWQTFNEIQKLLSKTNGKVVGDLMTPTPLVVHESTNLE 752
           IDTISG +    DA+LFPDVDS+W+TFNEIQKLLSKTNGKVVGDLMTP+PLVVHEST+LE
Sbjct: 119 IDTISGSS----DASLFPDVDSTWKTFNEIQKLLSKTNGKVVGDLMTPSPLVVHESTSLE 174

Query: 753 DAARLLLETKYRRLPVVDEDGKLVGLITRGNIVKAALLSKRAGER 887
           DAARLLLETKYRRLPVVD+DGKLVGLITRGNIVKAALLSKR+GER
Sbjct: 175 DAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRSGER 219


>ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
           lyrata] gi|297315009|gb|EFH45432.1| hypothetical protein
           ARALYDRAFT_491262 [Arabidopsis lyrata subsp. lyrata]
          Length = 237

 Score =  269 bits (687), Expect = 1e-69
 Identities = 147/238 (61%), Positives = 175/238 (73%), Gaps = 12/238 (5%)
 Frame = +3

Query: 213 MSSIHLINTLGVPLRSLAPSLFPQCHSPLPSSAVP-----KRRRFSH-------SAGFRI 356
           M SI L  +L +    L  SL  QC  P+ SS+ P      RRR S        SA F  
Sbjct: 1   MGSISLSYSLPITRLPLLTSLNHQCFLPISSSSFPLLPLSNRRRSSTFSPSIAVSAFFAA 60

Query: 357 VSGPTVNSVPRGNGTYTVADFMTKKQNLHVVKTTTTVDEALEALVSNRISGLPVIDDDWN 536
            +    NSVP  NG YTV DFMT +QNLHVVK +T+VD+ALE LV  +++GLPVIDD+W 
Sbjct: 61  PASVNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWT 120

Query: 537 LVGVVSDYDLLAIDTISGGTQRQGDANLFPDVDSSWQTFNEIQKLLSKTNGKVVGDLMTP 716
           LVGVVSDYDLLA+D+ISG  + Q D NLFPDVDS+W+TFNE+QKL+SKT GKVVGDLMTP
Sbjct: 121 LVGVVSDYDLLALDSISG--RSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTP 178

Query: 717 TPLVVHESTNLEDAARLLLETKYRRLPVVDEDGKLVGLITRGNIVKAALLSKRAGERS 890
           +PLVV +STNLEDAARLLLETK+RRLPVVD DGKL+G++TRGN+V+AAL  KR  E S
Sbjct: 179 SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETENS 236


>ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Cucumis sativus] gi|449486597|ref|XP_004157343.1|
           PREDICTED: CBS domain-containing protein CBSX1,
           chloroplastic-like [Cucumis sativus]
          Length = 239

 Score =  268 bits (684), Expect = 3e-69
 Identities = 153/243 (62%), Positives = 173/243 (71%), Gaps = 17/243 (6%)
 Frame = +3

Query: 213 MSSIHLINTLGVPLRSLAPSLFPQCHSP-------LPSSAVPKRRRFSHSAGFRI----- 356
           MSSI L N+   PL    P   P  H         L ++++ K  RF  S  F       
Sbjct: 1   MSSISLSNSH--PLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLP 58

Query: 357 -----VSGPTVNSVPRGNGTYTVADFMTKKQNLHVVKTTTTVDEALEALVSNRISGLPVI 521
                     V+S P   GTYTV DFMT+K+NL+VVK TTTVDEALE LV  RI+G PV+
Sbjct: 59  LVLASSGAGVVDSFPL-RGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVV 117

Query: 522 DDDWNLVGVVSDYDLLAIDTISGGTQRQGDANLFPDVDSSWQTFNEIQKLLSKTNGKVVG 701
           DDDWNLVGVVSDYDLLA+D+ISGGTQ   D NLFPDVDSSW+TFNEIQKLL KTNGKVVG
Sbjct: 118 DDDWNLVGVVSDYDLLALDSISGGTQ--SDTNLFPDVDSSWKTFNEIQKLLCKTNGKVVG 175

Query: 702 DLMTPTPLVVHESTNLEDAARLLLETKYRRLPVVDEDGKLVGLITRGNIVKAALLSKRAG 881
           DLMT +PL V E++NLEDAARLLLETKYRRLPVVD DGKLVG+ITRGN+V+AAL  KRA 
Sbjct: 176 DLMTSSPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 235

Query: 882 ERS 890
           ERS
Sbjct: 236 ERS 238


Top