BLASTX nr result

ID: Glycyrrhiza24_contig00010544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010544
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   464   e-128
ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   462   e-128
ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   445   e-123
gb|ABK95213.1| unknown [Populus trichocarpa]                          444   e-122
ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121

>ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
            max]
          Length = 299

 Score =  464 bits (1195), Expect = e-128
 Identities = 220/244 (90%), Positives = 229/244 (93%)
 Frame = -1

Query: 1002 AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGQKKEKHLTKPEV 823
            AVKCGMSALWDKWGARIPITVLWVDDNIVSQ+KTPEKEGFCALQIGCG KK+KHLTKPEV
Sbjct: 56   AVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHLTKPEV 115

Query: 822  GHFRAQGVPMKRKLREFPVTEDALLPVGTELNVRHFVPGQYVDITGITKGKGFQGGMKRH 643
            GHFRAQGVPMKRKLREFPVTEDALLPVGT LNVRHFVPGQ+VDI+GITKGKGFQG MKRH
Sbjct: 116  GHFRAQGVPMKRKLREFPVTEDALLPVGTSLNVRHFVPGQFVDISGITKGKGFQGVMKRH 175

Query: 642  GFKGMPASHGASKSHRSIGSTGQRDDPGKVFKGKKMPGRMGAEQRTVKNVWVYKIDPARN 463
            GF G PASHGAS +HR++GS G     GKVFK KKMPGRMG +QRTVKNVWVYKIDPARN
Sbjct: 176  GFSGGPASHGASLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTVKNVWVYKIDPARN 235

Query: 462  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVADHGDVDPF 283
            LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVA+ GDVDPF
Sbjct: 236  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVAELGDVDPF 295

Query: 282  MVTD 271
            MVTD
Sbjct: 296  MVTD 299


>ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
            max]
          Length = 300

 Score =  462 bits (1189), Expect = e-128
 Identities = 220/244 (90%), Positives = 227/244 (93%)
 Frame = -1

Query: 1002 AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGQKKEKHLTKPEV 823
            AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCG KK+KHLTKPEV
Sbjct: 57   AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGHKKDKHLTKPEV 116

Query: 822  GHFRAQGVPMKRKLREFPVTEDALLPVGTELNVRHFVPGQYVDITGITKGKGFQGGMKRH 643
            GHFRAQGVPMKRKL+EFPVTEDALLPVGT LNVRHFVPGQYVDITGITKGKGFQG MKRH
Sbjct: 117  GHFRAQGVPMKRKLKEFPVTEDALLPVGTSLNVRHFVPGQYVDITGITKGKGFQGVMKRH 176

Query: 642  GFKGMPASHGASKSHRSIGSTGQRDDPGKVFKGKKMPGRMGAEQRTVKNVWVYKIDPARN 463
            GF G PASHG S +HR++GS G     GKVFK KKMPGRMG +QRTVKNVWVYKIDPARN
Sbjct: 177  GFSGGPASHGNSLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTVKNVWVYKIDPARN 236

Query: 462  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVADHGDVDPF 283
            LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDED DNLKPLVA+ GDVDPF
Sbjct: 237  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDIDNLKPLVAELGDVDPF 296

Query: 282  MVTD 271
            MVTD
Sbjct: 297  MVTD 300


>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis vinifera]
            gi|297736812|emb|CBI26013.3| unnamed protein product
            [Vitis vinifera]
          Length = 307

 Score =  445 bits (1144), Expect = e-123
 Identities = 210/244 (86%), Positives = 224/244 (91%)
 Frame = -1

Query: 1002 AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGQKKEKHLTKPEV 823
            AVKCGMSALWDKWGAR+PITVLW+DDNIVSQVKT EKEG  ALQ+GCGQKK KHLTKPEV
Sbjct: 64   AVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHLTKPEV 123

Query: 822  GHFRAQGVPMKRKLREFPVTEDALLPVGTELNVRHFVPGQYVDITGITKGKGFQGGMKRH 643
            GHFRAQGVP+KRKLREFPVTEDALLPVGT + VRHFVPGQYVD+TGIT+GKGFQGGMKR 
Sbjct: 124  GHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQGGMKRW 183

Query: 642  GFKGMPASHGASKSHRSIGSTGQRDDPGKVFKGKKMPGRMGAEQRTVKNVWVYKIDPARN 463
            GFKGMPASHGAS SHRSIGSTGQRD PGKVFKGKKMPGRMG +QRTVKNVWVYKIDP RN
Sbjct: 184  GFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKIDPTRN 243

Query: 462  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVADHGDVDPF 283
            LMWV+GQVPGA GNFVFIKDAVY+KPD S+LPFPTYF  EDED   L+P+VAD GD+DPF
Sbjct: 244  LMWVRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPAEDEDPTVLEPIVADLGDIDPF 303

Query: 282  MVTD 271
            MV D
Sbjct: 304  MVAD 307


>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  444 bits (1141), Expect = e-122
 Identities = 213/244 (87%), Positives = 224/244 (91%)
 Frame = -1

Query: 1002 AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGQKKEKHLTKPEV 823
            AVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKT EKEGF ALQ+GCGQKKEKHLTKPEV
Sbjct: 74   AVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHLTKPEV 133

Query: 822  GHFRAQGVPMKRKLREFPVTEDALLPVGTELNVRHFVPGQYVDITGITKGKGFQGGMKRH 643
            GHFRAQGVPMKRKLREFPVTEDALLPVGT + VRHFVPGQ+VD+ GIT GKGFQGGMKRH
Sbjct: 134  GHFRAQGVPMKRKLREFPVTEDALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQGGMKRH 193

Query: 642  GFKGMPASHGASKSHRSIGSTGQRDDPGKVFKGKKMPGRMGAEQRTVKNVWVYKIDPARN 463
            GFKG PASHGAS SHRSIGSTGQRD PGKVFKGKKMPGRMG  QRTVKNVWVYKIDPARN
Sbjct: 194  GFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYKIDPARN 253

Query: 462  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVADHGDVDPF 283
            LMWVKGQVPGA GNFVFIKD+VY+KPDI +LPFPTYF  ED+  DN +PLVAD G+VDPF
Sbjct: 254  LMWVKGQVPGAEGNFVFIKDSVYKKPDIQMLPFPTYFGAEDD--DNAEPLVADLGEVDPF 311

Query: 282  MVTD 271
            MV D
Sbjct: 312  MVAD 315


>ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  441 bits (1135), Expect = e-121
 Identities = 212/244 (86%), Positives = 224/244 (91%)
 Frame = -1

Query: 1002 AVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGQKKEKHLTKPEV 823
            AVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKT EKEGF ALQ+GCGQKKEKHLTKPEV
Sbjct: 79   AVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHLTKPEV 138

Query: 822  GHFRAQGVPMKRKLREFPVTEDALLPVGTELNVRHFVPGQYVDITGITKGKGFQGGMKRH 643
            GHFRAQGVPMKRKLREFPVTE+ALLPVGT + VRHFVPGQ+VD+ GIT GKGFQGGMKRH
Sbjct: 139  GHFRAQGVPMKRKLREFPVTENALLPVGTCIGVRHFVPGQFVDVAGITMGKGFQGGMKRH 198

Query: 642  GFKGMPASHGASKSHRSIGSTGQRDDPGKVFKGKKMPGRMGAEQRTVKNVWVYKIDPARN 463
            GFKG PASHGAS SHRSIGSTGQRD PGKVFKGKKMPGRMG  QRTVKNVWVYKIDPARN
Sbjct: 199  GFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYKIDPARN 258

Query: 462  LMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDTDNLKPLVADHGDVDPF 283
            LMWVKGQVPGA GNFVFIKD+V++KPDI +LPFPTYF  E ED DN +PLVAD G+VDPF
Sbjct: 259  LMWVKGQVPGAEGNFVFIKDSVFKKPDIQILPFPTYF--ETEDDDNSEPLVADLGEVDPF 316

Query: 282  MVTD 271
            MV D
Sbjct: 317  MVAD 320


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