BLASTX nr result
ID: Glycyrrhiza24_contig00010539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00010539
(1547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi... 660 0.0
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi... 636 e-180
ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containi... 477 e-132
ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containi... 477 e-132
ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|2... 463 e-128
>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 629
Score = 660 bits (1704), Expect = 0.0
Identities = 339/464 (73%), Positives = 376/464 (81%), Gaps = 4/464 (0%)
Frame = -3
Query: 1380 PNHSHHLQVLRSFSSIPPRFTTNSTFPINPSFRRFSSEPVLAHAGSDSDHAVIADLFSKP 1201
P ++H QVL SSIP RF NSTFP+NPSFRRFSSEPVLA A D+DH ++AD+FSKP
Sbjct: 16 PRITYHSQVLPYSSSIPRRFAANSTFPLNPSFRRFSSEPVLAQA--DTDHLLVADIFSKP 73
Query: 1200 VDSDDVKKHFDS----INHDAIVAVLWKLDSNPDVARRFFQWVSETHPERLSSKSYNAML 1033
VDS+D K S I HDA++AVL K DSN D ARRFFQWVSE HPERLSSK YN+ML
Sbjct: 74 VDSEDFKTLLGSNRVSITHDAVLAVLGKFDSNVDAARRFFQWVSENHPERLSSKCYNSML 133
Query: 1032 RVLGTNGFVDEFWDLVCTMKRKGYGISRYVRERVLECFEKGGMDGDAVKLKALFDSDNNN 853
VLGTNGFVDEFWDLV MK+KGYG+S+ V+ERVLE FEKGGMDGD KLK LFD
Sbjct: 134 CVLGTNGFVDEFWDLVNVMKKKGYGVSKGVKERVLESFEKGGMDGDVAKLKGLFD----- 188
Query: 852 NTVERNCSRVCRIVRNNVWSDDVERQIRDLNVGFXXXXXXXXXXXXXXEPSKALIFFRWV 673
N+ E+N + VCRIVRNNVW DDVE+QI DLNVGF EP KALIFFRW+
Sbjct: 189 NSKEKNIAIVCRIVRNNVWGDDVEKQIEDLNVGFSSEVVKTVLESLVLEPVKALIFFRWL 248
Query: 672 EESGMFKHDGCTYNAMARVLGREDSIDRFWKLVGDTRSAGCEMEVETFVKVLGRFCKRKM 493
EESG+FKHDG TYNAMARVLGRED IDRFWKLVGD RSAG EME ETFVKVLGRFCKR+M
Sbjct: 249 EESGLFKHDGRTYNAMARVLGREDLIDRFWKLVGDMRSAGFEMEAETFVKVLGRFCKRRM 308
Query: 492 IKDAVELYEFAMAGANKPYSQQCCTFLLRKVVASKELDMDLFSRVLKVFTGSGNALTDSM 313
+KDAVELYEFAMAGANKP + QCC FLLRKV A KELD DLFSRVLKVFTG+GN LTDS+
Sbjct: 309 VKDAVELYEFAMAGANKP-TVQCCVFLLRKVAAGKELDTDLFSRVLKVFTGNGNVLTDSV 367
Query: 312 ADAVLKSLTSVGRIGEWNKVLNEMEACGFVASGNLQRKIAFRLGATGNKEQANEFVKRID 133
A+AVLKSLTSVGR GEWNKVL EME CGFVA G+LQ KIA+RLGA GNKEQA+EF+ RI+
Sbjct: 368 ANAVLKSLTSVGRTGEWNKVLKEMEDCGFVAGGSLQSKIAYRLGAAGNKEQAHEFMNRIE 427
Query: 132 ASGSIPDHKMWESLVEGHCVAGNLDKALDSFKEMVEKEGVESAG 1
SGS P K WESL++G+CVAGNLDKA +SFKE+VEKEGV SAG
Sbjct: 428 VSGSNPYRKTWESLIQGYCVAGNLDKAFESFKEIVEKEGVASAG 471
>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 628
Score = 636 bits (1640), Expect = e-180
Identities = 334/468 (71%), Positives = 370/468 (79%), Gaps = 4/468 (0%)
Frame = -3
Query: 1392 RNGIPNHSHHLQVLRSFSSIPPRFTTNSTFPINPSFRRFSSEPVLAHAGSDSDHAVIADL 1213
R+ I NHS QVL S SSIP RFT NSTF +NPSFR FSSEPVLA A D+D+ ++ D+
Sbjct: 15 RDRILNHS---QVLPSSSSIPCRFTANSTFQLNPSFRHFSSEPVLAQA--DTDNLLVVDI 69
Query: 1212 FSKPVDSDDVKKHFDS----INHDAIVAVLWKLDSNPDVARRFFQWVSETHPERLSSKSY 1045
FSKP DS+D K DS I HDA++AVLWKLDSN + ARRFF WVSE HPERLSSK Y
Sbjct: 70 FSKPADSEDFKTLLDSNRVMITHDAVLAVLWKLDSNVEAARRFFLWVSENHPERLSSKCY 129
Query: 1044 NAMLRVLGTNGFVDEFWDLVCTMKRKGYGISRYVRERVLECFEKGGMDGDAVKLKALFDS 865
N+MLRVLGTNG V EFWDLV MK+KGYG+S+ V+E VLE FEKGGM D KLK L+D+
Sbjct: 130 NSMLRVLGTNGVVHEFWDLVDVMKKKGYGVSKGVKEIVLESFEKGGMVADVAKLKGLYDN 189
Query: 864 DNNNNTVERNCSRVCRIVRNNVWSDDVERQIRDLNVGFXXXXXXXXXXXXXXEPSKALIF 685
N E+N + VCRIVRNNVW DDVERQI+DLNVGF EP+KALIF
Sbjct: 190 LN-----EKNIAIVCRIVRNNVWDDDVERQIKDLNVGFSGDVVKMVLESLASEPAKALIF 244
Query: 684 FRWVEESGMFKHDGCTYNAMARVLGREDSIDRFWKLVGDTRSAGCEMEVETFVKVLGRFC 505
FRW+EESGMFK DG TYNAMARVLGREDSIDRFWKLVGD R+AG EME ETFVKVLGRFC
Sbjct: 245 FRWLEESGMFKQDGATYNAMARVLGREDSIDRFWKLVGDMRNAGFEMEFETFVKVLGRFC 304
Query: 504 KRKMIKDAVELYEFAMAGANKPYSQQCCTFLLRKVVASKELDMDLFSRVLKVFTGSGNAL 325
KR+M+KDAVELYEFAM G NKP + QCC FLLRKV A KELDMDLF RVLKVFTGSGN L
Sbjct: 305 KRRMVKDAVELYEFAMTGVNKP-TVQCCVFLLRKVAAGKELDMDLFLRVLKVFTGSGNLL 363
Query: 324 TDSMADAVLKSLTSVGRIGEWNKVLNEMEACGFVASGNLQRKIAFRLGATGNKEQANEFV 145
TDSMADAVLK+LTSVGR GEWNKVL EME G NLQ KIA+RLGA GNKEQA+EF+
Sbjct: 364 TDSMADAVLKTLTSVGRTGEWNKVLKEMEIVG-CCRCNLQSKIAYRLGAAGNKEQAHEFM 422
Query: 144 KRIDASGSIPDHKMWESLVEGHCVAGNLDKALDSFKEMVEKEGVESAG 1
RI+AS S PD K W+SL+EGHCVAGNLDKA +SFKE+VEKEGV SAG
Sbjct: 423 NRIEASRSSPDRKTWDSLIEGHCVAGNLDKAFESFKEIVEKEGVASAG 470
>ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Cucumis sativus]
Length = 656
Score = 477 bits (1228), Expect = e-132
Identities = 246/472 (52%), Positives = 330/472 (69%), Gaps = 18/472 (3%)
Frame = -3
Query: 1365 HLQVLRSFSSIPPR--------------FTTNSTFPINPSFRRFSSEPVLAHAGSDSDHA 1228
+LQ LRS SS+ P+ + T+ PI + R FSSEP A +SDHA
Sbjct: 30 NLQSLRSLSSLFPKHPLHHTPSPPISDFYFTSIVRPIYGTLRTFSSEPA---AEQESDHA 86
Query: 1227 VIADLFSKPVDSDDVKKHFDS----INHDAIVAVLWKLDSNPDVARRFFQWVSETHPERL 1060
VI D+ SK D D+++K +S I+HD ++ VL +L+SNPD A RFF WVS + E+L
Sbjct: 87 VIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKL 146
Query: 1059 SSKSYNAMLRVLGTNGFVDEFWDLVCTMKRKGYGISRYVRERVLECFEKGGMDGDAVKLK 880
SSKS+N ML +LG NG V +FWDL C MK+KGYG+S+ VR++VLE F+K G+ +A KL+
Sbjct: 147 SSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLR 206
Query: 879 ALFDSDNNNNTVERNCSRVCRIVRNNVWSDDVERQIRDLNVGFXXXXXXXXXXXXXXEPS 700
+F S + + + + S V R++R N+W +DVE+Q+RD++V F +P+
Sbjct: 207 DMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPA 266
Query: 699 KALIFFRWVEESGMFKHDGCTYNAMARVLGREDSIDRFWKLVGDTRSAGCEMEVETFVKV 520
KA IFF W++ESGMFKHD TYNAMA VLGRED IDRFWK+V + RS G +ME+ETF KV
Sbjct: 267 KAYIFFLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKV 326
Query: 519 LGRFCKRKMIKDAVELYEFAMAGANKPYSQQCCTFLLRKVVASKELDMDLFSRVLKVFTG 340
LGRFCKR+MI++AV LY FAM+ +KP S+ C TFLL+K+ S++ D+DLFSR LK+F+
Sbjct: 327 LGRFCKRRMIEEAVNLYVFAMSVGDKP-SEDCLTFLLKKIAVSEQFDLDLFSRALKIFSE 385
Query: 339 SGNALTDSMADAVLKSLTSVGRIGEWNKVLNEMEACGFVASGNLQRKIAFRLGATGNKEQ 160
SGN L DSM AVL+SL+SVGR GE+N+VLN M+ G+V SG L+RK+A+RL TG ++
Sbjct: 386 SGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDE 445
Query: 159 ANEFVKRIDASGSIPDHKMWESLVEGHCVAGNLDKALDSFKEMVEKEGVESA 4
AN+F+ ++ASG PD+K W SL+EGHC AG+LDKA D +MVEK GV SA
Sbjct: 446 ANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSA 497
>ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Cucumis sativus]
Length = 656
Score = 477 bits (1227), Expect = e-132
Identities = 246/472 (52%), Positives = 330/472 (69%), Gaps = 18/472 (3%)
Frame = -3
Query: 1365 HLQVLRSFSSIPPR--------------FTTNSTFPINPSFRRFSSEPVLAHAGSDSDHA 1228
+LQ LRS SS+ P+ + T+ PI + R FSSEP A +SDHA
Sbjct: 30 NLQSLRSLSSLFPKHPLHHTPSPPISDFYFTSIVRPIYGTLRTFSSEPA---AVQESDHA 86
Query: 1227 VIADLFSKPVDSDDVKKHFDS----INHDAIVAVLWKLDSNPDVARRFFQWVSETHPERL 1060
VI D+ SK D D+++K +S I+HD ++ VL +L+SNPD A RFF WVS + E+L
Sbjct: 87 VIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKL 146
Query: 1059 SSKSYNAMLRVLGTNGFVDEFWDLVCTMKRKGYGISRYVRERVLECFEKGGMDGDAVKLK 880
SSKS+N ML +LG NG V +FWDL C MK+KGYG+S+ VR++VLE F+K G+ +A KL+
Sbjct: 147 SSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLR 206
Query: 879 ALFDSDNNNNTVERNCSRVCRIVRNNVWSDDVERQIRDLNVGFXXXXXXXXXXXXXXEPS 700
+F S + + + + S V R++R N+W +DVE+Q+RD++V F +P+
Sbjct: 207 DMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPA 266
Query: 699 KALIFFRWVEESGMFKHDGCTYNAMARVLGREDSIDRFWKLVGDTRSAGCEMEVETFVKV 520
KA IFF W++ESGMFKHD TYNAMA VLGRED IDRFWK+V + RS G +ME+ETF KV
Sbjct: 267 KAYIFFLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKV 326
Query: 519 LGRFCKRKMIKDAVELYEFAMAGANKPYSQQCCTFLLRKVVASKELDMDLFSRVLKVFTG 340
LGRFCKR+MI++AV LY FAM+ +KP S+ C TFLL+K+ S++ D+DLFSR LK+F+
Sbjct: 327 LGRFCKRRMIEEAVNLYVFAMSVGDKP-SEDCLTFLLKKIAVSEQFDLDLFSRALKIFSE 385
Query: 339 SGNALTDSMADAVLKSLTSVGRIGEWNKVLNEMEACGFVASGNLQRKIAFRLGATGNKEQ 160
SGN L DSM AVL+SL+SVGR GE+N+VLN M+ G+V SG L+RK+A+RL TG ++
Sbjct: 386 SGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDE 445
Query: 159 ANEFVKRIDASGSIPDHKMWESLVEGHCVAGNLDKALDSFKEMVEKEGVESA 4
AN+F+ ++ASG PD+K W SL+EGHC AG+LDKA D +MVEK GV SA
Sbjct: 446 ANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSA 497
>ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|222848266|gb|EEE85813.1|
predicted protein [Populus trichocarpa]
Length = 616
Score = 463 bits (1191), Expect = e-128
Identities = 244/433 (56%), Positives = 303/433 (69%), Gaps = 5/433 (1%)
Frame = -3
Query: 1284 RRFSSEPVLAHAGSDSDHAV-IADLFSKPVDSDDVKKHFDS----INHDAIVAVLWKLDS 1120
R FSSE L D DH + + D F+K + DD+ K + I+HD ++ VL L+S
Sbjct: 39 RNFSSEASLVEPTKDPDHVLLVCDAFTKFDEFDDISKELELNSVVISHDLVLKVLKSLES 98
Query: 1119 NPDVARRFFQWVSETHPERLSSKSYNAMLRVLGTNGFVDEFWDLVCTMKRKGYGISRYVR 940
P+VA+RFF WV E RLSSKSYN ML +LG NG V EFWDLV MK KG+G+S R
Sbjct: 99 KPEVAKRFFDWVLEKDSGRLSSKSYNWMLGILGVNGLVVEFWDLVDKMKIKGHGVSGVTR 158
Query: 939 ERVLECFEKGGMDGDAVKLKALFDSDNNNNTVERNCSRVCRIVRNNVWSDDVERQIRDLN 760
+RV E FEK G++ D KLK +F + +N+VE+ RV RIVRN VW +DVE +I+ L
Sbjct: 159 DRVQEKFEKEGLNDDLEKLKGVFAKGSVDNSVEKIGLRVSRIVRNKVWGEDVEGEIKHLC 218
Query: 759 VGFXXXXXXXXXXXXXXEPSKALIFFRWVEESGMFKHDGCTYNAMARVLGREDSIDRFWK 580
F EP KALIFFRWVE+S + KHDG +YNAMARVLGRED IDRFWK
Sbjct: 219 AEFSSDLVKIVLEHLVMEPVKALIFFRWVEDSELCKHDGRSYNAMARVLGREDCIDRFWK 278
Query: 579 LVGDTRSAGCEMEVETFVKVLGRFCKRKMIKDAVELYEFAMAGANKPYSQQCCTFLLRKV 400
++ + RS G EME TF VL RF RKMIK+A++LYEFAM GANKP S +CCT+LLRK+
Sbjct: 279 VIDEMRSNGFEMETGTFDTVLARFMSRKMIKEAIDLYEFAMTGANKP-SAKCCTYLLRKI 337
Query: 399 VASKELDMDLFSRVLKVFTGSGNALTDSMADAVLKSLTSVGRIGEWNKVLNEMEACGFVA 220
V K+LDM LFSRV+++FTG GN LTD+M DAVLK+LT+VG+ GE NKVL EM+ GFVA
Sbjct: 338 VVGKQLDMGLFSRVVEIFTGHGNVLTDAMLDAVLKALTNVGKFGECNKVLREMKVAGFVA 397
Query: 219 SGNLQRKIAFRLGATGNKEQANEFVKRIDASGSIPDHKMWESLVEGHCVAGNLDKALDSF 40
SGNLQRKIAF L + G ++ANEFV +++SG +K W SL+EGHCV+G+L+KA D F
Sbjct: 398 SGNLQRKIAFGLTSAGKNDEANEFVNHMESSGRDLSYKAWASLIEGHCVSGDLEKASDCF 457
Query: 39 KEMVEKEGVESAG 1
K MVEK+GV AG
Sbjct: 458 KIMVEKKGVSGAG 470