BLASTX nr result

ID: Glycyrrhiza24_contig00010525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010525
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2...    81   6e-13
ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm...    59   4e-12
gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indi...    60   3e-09
ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...    60   9e-07

>ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 42/81 (51%), Positives = 52/81 (64%)
 Frame = -1

Query: 755 LNGHGYPGLRSGKSGLLEMKERASTLVFQPHYHYTMNSCGALCTYSLYDKQVNGAGAWRT 576
           ++GHGYPGL SGK      K RA +      ++ T+     +CTYSLYDKQVNG  AWRT
Sbjct: 8   IHGHGYPGLCSGKKWPTRKKGRALSC-----FNSTILLIVVVCTYSLYDKQVNGVSAWRT 62

Query: 575 ERFIKPFIASTP*KGRGFLYK 513
           ++FIKPF+  TP  GR  LYK
Sbjct: 63  KQFIKPFLVVTPKIGREVLYK 83


>ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis]
           gi|223523943|gb|EEF27244.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 57

 Score = 59.3 bits (142), Expect(2) = 4e-12
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -1

Query: 620 SLYDKQVNGAGAWRTERFIKPFIASTP 540
           SLYDKQVNGAGAWRTERFIKPF+ASTP
Sbjct: 31  SLYDKQVNGAGAWRTERFIKPFLASTP 57



 Score = 39.3 bits (90), Expect(2) = 4e-12
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = -2

Query: 751 TVTVIPDCVPEKVAYLK*KKGRALLCFNPTI 659
           TV VIPDCVPEKVAYL   KGRAL  ++  +
Sbjct: 10  TVMVIPDCVPEKVAYL---KGRALSLYDKQV 37


>gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indica Group]
          Length = 985

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -2

Query: 853 ICARQANFAFWEVKLRLKRTFRNDSIEDLYIY 758
           ICARQAN AFWEVK  LKRTFRNDSIED+YI+
Sbjct: 772 ICARQANLAFWEVKEGLKRTFRNDSIEDIYIH 803



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 761 ILLNGHGYPGLRSGKSGLLEMKER 690
           I ++ + Y GLRSGKS LL++ +R
Sbjct: 800 IYIHRNAYSGLRSGKSSLLDLHDR 823


>ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like
            [Cucumis sativus] gi|449471067|ref|XP_004153199.1|
            PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
            protein 2-like [Cucumis sativus]
            gi|449471614|ref|XP_004153361.1| PREDICTED: NADH
            dehydrogenase [ubiquinone] iron-sulfur protein 2-like
            [Cucumis sativus] gi|449472439|ref|XP_004153594.1|
            PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
            protein 2-like [Cucumis sativus]
            gi|449472462|ref|XP_004153601.1| PREDICTED: NADH
            dehydrogenase [ubiquinone] iron-sulfur protein 2-like
            [Cucumis sativus] gi|449532418|ref|XP_004173178.1|
            PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
            protein 2-like [Cucumis sativus]
          Length = 137

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 30/44 (68%), Positives = 30/44 (68%)
 Frame = +3

Query: 1044 MCYNAEPRTLRLIYXXXXXXXXXXXXXVMAQSIDRKPYDGKLSR 1175
            MCYNAEPRTLRLIY             VMAQSIDRKPYDGKL R
Sbjct: 1    MCYNAEPRTLRLIYISSQLSSSRISSLVMAQSIDRKPYDGKLPR 44


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