BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010475
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   590   e-166
ref|XP_003523387.1| PREDICTED: RNA polymerase sigma factor rpoD-...   578   e-163
ref|XP_003526693.1| PREDICTED: RNA polymerase sigma factor rpoD-...   578   e-162
dbj|BAM05478.1| sigma-like factor 5B [Glycine max]                    576   e-162
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-...   516   e-144

>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
            gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
            rpoD [Medicago truncatula]
          Length = 514

 Score =  590 bits (1521), Expect = e-166
 Identities = 302/388 (77%), Positives = 339/388 (87%)
 Frame = -1

Query: 1320 RRGKKIGDGNKEEELNNDRVIRSRKTKAKRLNLDERIELQKNKEGEEVIPTRRKINVKNR 1141
            RRGKKIGD +KE+  N+DRV+R++KTKAKR+NLDERI L+ ++  E+VIPTR+K N ++R
Sbjct: 128  RRGKKIGDVSKEDS-NSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKKRNPRSR 186

Query: 1140 IGKIEELVREYSILTDFGSLDWKKMKIPPVLPASEHALLFKLMQPLKALCQLKEDLQKEL 961
            + KI+EL+REYS+  D  SLDWKKMKIPPVLP+SEHA LFKLMQP+KAL Q+K+DLQKEL
Sbjct: 187  VEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVKDDLQKEL 246

Query: 960  AREPTEDEIAEATNMRVAQVKKAIEVGQAARNKLIKHNLRLVLFVINRHFPDFANGPRFQ 781
             REPTEDEIA+ATNM   QVKKAIEVG+AARNKLIKHNLRLVLFVINR+F DFAN PRFQ
Sbjct: 247  EREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDFANSPRFQ 306

Query: 780  DLCQAGVKGLIIAIDRFEPNRRFRLSTYSLFWIRHAIIRSLTLSSFTRVPFGLESVRAEI 601
            DLCQAGVKGLI +IDRFEPNRRFRLSTYSLFWIRHAIIRS+TL+SF+RVPFGLESVRAEI
Sbjct: 307  DLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGLESVRAEI 366

Query: 600  QRAKTELTFELQRSPTMEEIIERVQISPERYHDVLKASKPLLSLHSRHMTTQEEFINXXX 421
            +RAK EL+F+LQRSPT EEIIE+V +SPERY DV+KASKPLLSLHSRH+TTQEEFIN   
Sbjct: 367  RRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQEEFINGVV 426

Query: 420  XXXXXXXDNRRQPAXXXXXXXXXXXXLKPKENLVIRQRFGLDGKGDRTLGEIAANLNISR 241
                   DNRRQPA            LKPKENLVIRQRFGLDGKGDRTLGEIA+NLNISR
Sbjct: 427  DDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIASNLNISR 486

Query: 240  EMVRKHEVKALMKLKHSARLDYLRRYVV 157
            EMVRKHEVKALMKLKHSARLDYLRRYVV
Sbjct: 487  EMVRKHEVKALMKLKHSARLDYLRRYVV 514


>ref|XP_003523387.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 509

 Score =  578 bits (1491), Expect = e-163
 Identities = 297/390 (76%), Positives = 334/390 (85%), Gaps = 2/390 (0%)
 Frame = -1

Query: 1320 RRGKKIGDGNKEEELNNDRVIR--SRKTKAKRLNLDERIELQKNKEGEEVIPTRRKINVK 1147
            RRGKK+ D ++E+EL  DRV+R  ++  KAKRL LD+RI L+ NK G+EVIPTR+K N +
Sbjct: 120  RRGKKVVDESEEKELKGDRVVRRQNKNKKAKRLTLDQRISLKNNKRGDEVIPTRKKRNFR 179

Query: 1146 NRIGKIEELVREYSILTDFGSLDWKKMKIPPVLPASEHALLFKLMQPLKALCQLKEDLQK 967
            NRI KIEEL+REYS+  DF S+DWK+M+IPPVL +SEHA LFKLMQP+KAL Q+KEDLQK
Sbjct: 180  NRIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQK 239

Query: 966  ELAREPTEDEIAEATNMRVAQVKKAIEVGQAARNKLIKHNLRLVLFVINRHFPDFANGPR 787
            ELAREP + E+A+ATNM + QVKKAI+VGQAARNKLIKHNLRLVLFVIN++F DFA+GPR
Sbjct: 240  ELAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPR 299

Query: 786  FQDLCQAGVKGLIIAIDRFEPNRRFRLSTYSLFWIRHAIIRSLTLSSFTRVPFGLESVRA 607
            FQDLCQAGVKGLI AIDRFEPNRRFRLSTYSLFWIRHAIIRS+TLSSF RVPFGLESVRA
Sbjct: 300  FQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRA 359

Query: 606  EIQRAKTELTFELQRSPTMEEIIERVQISPERYHDVLKASKPLLSLHSRHMTTQEEFINX 427
            EIQ+AKTELTF+LQRSPT EEIIERV ISPERYHD++KASK +LSL+SRH TTQEEFIN 
Sbjct: 360  EIQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFING 419

Query: 426  XXXXXXXXXDNRRQPAXXXXXXXXXXXXLKPKENLVIRQRFGLDGKGDRTLGEIAANLNI 247
                     DNR+QPA            LKPKE+LVIRQRFGLDGKGDRTLGEIA NLNI
Sbjct: 420  IVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNI 479

Query: 246  SREMVRKHEVKALMKLKHSARLDYLRRYVV 157
            SREMVRKHEVKALMKL HSARLDYLRRYVV
Sbjct: 480  SREMVRKHEVKALMKLNHSARLDYLRRYVV 509


>ref|XP_003526693.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 507

 Score =  578 bits (1490), Expect = e-162
 Identities = 297/390 (76%), Positives = 335/390 (85%), Gaps = 2/390 (0%)
 Frame = -1

Query: 1320 RRGKKIGDGNKEEELNNDRVIRS--RKTKAKRLNLDERIELQKNKEGEEVIPTRRKINVK 1147
            RRGKK+ D ++E+EL  D V+R+  +  K KRLNLD+RI L+ NK G+EVIPTR+K NV 
Sbjct: 118  RRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKRNVG 177

Query: 1146 NRIGKIEELVREYSILTDFGSLDWKKMKIPPVLPASEHALLFKLMQPLKALCQLKEDLQK 967
            N+I KIEEL+REYS+ TDF S+DWK+M+IPPVL +SEHA LFKLMQP+KAL Q+KEDLQ+
Sbjct: 178  NKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQ 237

Query: 966  ELAREPTEDEIAEATNMRVAQVKKAIEVGQAARNKLIKHNLRLVLFVINRHFPDFANGPR 787
            EL REP + E+A+ATNM + QV+KAI+VGQAARNKLIKHNLRLVLFVIN++F DFA+GPR
Sbjct: 238  ELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPR 297

Query: 786  FQDLCQAGVKGLIIAIDRFEPNRRFRLSTYSLFWIRHAIIRSLTLSSFTRVPFGLESVRA 607
            FQDLCQAGVKGLI AIDRFEPNRRFRLSTYSLFWIRHAIIRS+TLS+FTRVPFGLESVRA
Sbjct: 298  FQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRA 357

Query: 606  EIQRAKTELTFELQRSPTMEEIIERVQISPERYHDVLKASKPLLSLHSRHMTTQEEFINX 427
            EIQ+AKTELTFELQRSPT EEIIERV ISPERYHDV+KASK +LSL+SRH TTQEEFIN 
Sbjct: 358  EIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFING 417

Query: 426  XXXXXXXXXDNRRQPAXXXXXXXXXXXXLKPKENLVIRQRFGLDGKGDRTLGEIAANLNI 247
                     DNR+QPA            LKPKE+LVIRQRFGLDGKGDRTLGEIA NLNI
Sbjct: 418  IVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNI 477

Query: 246  SREMVRKHEVKALMKLKHSARLDYLRRYVV 157
            SREMVRKHEVKALMKLKHSARLDYLRRYVV
Sbjct: 478  SREMVRKHEVKALMKLKHSARLDYLRRYVV 507


>dbj|BAM05478.1| sigma-like factor 5B [Glycine max]
          Length = 507

 Score =  576 bits (1484), Expect = e-162
 Identities = 296/390 (75%), Positives = 334/390 (85%), Gaps = 2/390 (0%)
 Frame = -1

Query: 1320 RRGKKIGDGNKEEELNNDRVIRS--RKTKAKRLNLDERIELQKNKEGEEVIPTRRKINVK 1147
            RRGKK+ D ++E+EL  D V+R+  +  K KRLNLD+RI L+ NK G+EVIPTR+K NV 
Sbjct: 118  RRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKRNVG 177

Query: 1146 NRIGKIEELVREYSILTDFGSLDWKKMKIPPVLPASEHALLFKLMQPLKALCQLKEDLQK 967
            N+I KIEEL+REYS+ TDF S+DWK+M+IPPVL +SEHA LFKLMQP+KAL Q+KEDLQ+
Sbjct: 178  NKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQ 237

Query: 966  ELAREPTEDEIAEATNMRVAQVKKAIEVGQAARNKLIKHNLRLVLFVINRHFPDFANGPR 787
            EL REP + E+A+ATNM + QV+KAI+VGQAARNKLIKHNLRLVLFVIN++F DFA+GPR
Sbjct: 238  ELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPR 297

Query: 786  FQDLCQAGVKGLIIAIDRFEPNRRFRLSTYSLFWIRHAIIRSLTLSSFTRVPFGLESVRA 607
            FQDLCQAGVKGLI AIDRFEPNRRFRLSTYSLFWIRHAIIRS+TLS+FTRVPFGLESVRA
Sbjct: 298  FQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRA 357

Query: 606  EIQRAKTELTFELQRSPTMEEIIERVQISPERYHDVLKASKPLLSLHSRHMTTQEEFINX 427
            EIQ+AKTELTFELQRSPT EEIIERV ISPERYHDV+KASK +LSL+SRH TTQEEFIN 
Sbjct: 358  EIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFING 417

Query: 426  XXXXXXXXXDNRRQPAXXXXXXXXXXXXLKPKENLVIRQRFGLDGKGDRTLGEIAANLNI 247
                     DNR+QPA            LKPKE+LVIR RFGLDGKGDRTLGEIA NLNI
Sbjct: 418  IVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRTLGEIAGNLNI 477

Query: 246  SREMVRKHEVKALMKLKHSARLDYLRRYVV 157
            SREMVRKHEVKALMKLKHSARLDYLRRYVV
Sbjct: 478  SREMVRKHEVKALMKLKHSARLDYLRRYVV 507


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 512

 Score =  516 bits (1329), Expect = e-144
 Identities = 268/388 (69%), Positives = 317/388 (81%)
 Frame = -1

Query: 1320 RRGKKIGDGNKEEELNNDRVIRSRKTKAKRLNLDERIELQKNKEGEEVIPTRRKINVKNR 1141
            RR KK+ +  + ++ N D V+R++  KAKRL+LD+RI L+ N + E +  T++K NVKNR
Sbjct: 128  RRRKKVSE--ERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNR 185

Query: 1140 IGKIEELVREYSILTDFGSLDWKKMKIPPVLPASEHALLFKLMQPLKALCQLKEDLQKEL 961
            +  I+ L+R+YS  TD  S+DWKKMKIPPVLP+SEHA LFKLMQP+KAL Q KEDL KE+
Sbjct: 186  VQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEV 244

Query: 960  AREPTEDEIAEATNMRVAQVKKAIEVGQAARNKLIKHNLRLVLFVINRHFPDFANGPRFQ 781
             +E T  E+A+ATNM + QV+KAIEVG+AARNKLIKHNLRLVLFVIN++F DFA+GPRFQ
Sbjct: 245  DKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQ 304

Query: 780  DLCQAGVKGLIIAIDRFEPNRRFRLSTYSLFWIRHAIIRSLTLSSFTRVPFGLESVRAEI 601
            DLCQAGVKGLI AIDRFEP RR +LSTYSLFWIRH+I+RS+TLSSFTRVPFGLE VR +I
Sbjct: 305  DLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDI 364

Query: 600  QRAKTELTFELQRSPTMEEIIERVQISPERYHDVLKASKPLLSLHSRHMTTQEEFINXXX 421
            QR K +LTFELQRSPT EE++ER+ IS ERYH+V+KASKP+LSLHSRH+TTQEE+IN   
Sbjct: 365  QRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGIT 424

Query: 420  XXXXXXXDNRRQPAXXXXXXXXXXXXLKPKENLVIRQRFGLDGKGDRTLGEIAANLNISR 241
                   DNRRQ A            LKPKE+LVIRQR+GLDGKGDRTLGEIA NLNISR
Sbjct: 425  DVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 484

Query: 240  EMVRKHEVKALMKLKHSARLDYLRRYVV 157
            E+VRKHEVKALMKLKH ARLDYLRRYVV
Sbjct: 485  EIVRKHEVKALMKLKHPARLDYLRRYVV 512