BLASTX nr result

ID: Glycyrrhiza24_contig00010470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010470
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33945.1| unknown [Lotus japonicus]                              421   e-115
ref|XP_003593096.1| mRNA turnover protein-like protein [Medicago...   396   e-108
gb|ACJ84943.1| unknown [Medicago truncatula]                          395   e-107
gb|AFK34090.1| unknown [Lotus japonicus]                              342   e-107
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   383   e-104

>gb|AFK33945.1| unknown [Lotus japonicus]
          Length = 229

 Score =  421 bits (1083), Expect = e-115
 Identities = 206/229 (89%), Positives = 223/229 (97%)
 Frame = -1

Query: 977 MPKSKRNRQVTLSKTKKKGRDHKEVIVNSIREAAEKYSSVYVFSFENMRNQKFKEFREQL 798
           MPKSKRN+QVTLSKTKKKGR+HKEVIVN+IR+AAEKYSS+YVFSFENMRN KFKEFR++L
Sbjct: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60

Query: 797 KSSSRFFLGSNKVMQVALGRSASDEIQPGLYKVSKLLRGDAGMVFTNLPKEEIERLFNAF 618
           KSSSRFFLGSNKVMQVALGRSASDEI+P LYKVSKLLRGD+GM FTNL KEE+ERLFN +
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120

Query: 617 EEYDFARTGGIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 438
           EEYDFARTGGIATEKVDL+EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEG 180

Query: 437 KPLSPEASRILRLMGIKMATFRLNLICRWSPDDFEVYIDGPGDSDVECS 291
           KPLSPEASRILRL+GIKMATFRL+L+CRW+PDDFE+YIDGPGDSDVECS
Sbjct: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229


>ref|XP_003593096.1| mRNA turnover protein-like protein [Medicago truncatula]
           gi|124360427|gb|ABN08437.1| Ribosomal protein L10
           [Medicago truncatula] gi|355482144|gb|AES63347.1| mRNA
           turnover protein-like protein [Medicago truncatula]
           gi|388513309|gb|AFK44716.1| unknown [Medicago
           truncatula]
          Length = 228

 Score =  396 bits (1017), Expect = e-108
 Identities = 195/228 (85%), Positives = 214/228 (93%), Gaps = 1/228 (0%)
 Frame = -1

Query: 977 MPKSKRNRQVTLSKTKKKGRDHKEVIVNSIREAAEKYSSVYVFSFENMRNQKFKEFREQL 798
           MPKSKRN+QVTLSKT KKGR HKE+I+N IR+AAEKYSS+YVF+F+NMRN K KEFREQL
Sbjct: 1   MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60

Query: 797 KSSSRFFLGSNKVMQVALGRSASDEIQPGLYKVSKLLRGDAGMVFTNLPKEEIERLFNAF 618
           +SSS+FFLGSNKVMQVA+GRS+SDEI+P L+KVSKLLRGDAGM+FTNL KEE+ERLFN F
Sbjct: 61  QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120

Query: 617 EEYDFARTGGIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 438
           E YDFARTG IATEKV+LKEGPLEQFTH+MEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 437 KPLSPEASRILRLMGIKMATFRLNLICRW-SPDDFEVYIDGPGDSDVE 297
           KPLSPEASRILRLMG  MATFRLNL+CRW S DDFE+YIDGPGDSDVE
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE 228


>gb|ACJ84943.1| unknown [Medicago truncatula]
          Length = 228

 Score =  395 bits (1014), Expect = e-107
 Identities = 194/228 (85%), Positives = 214/228 (93%), Gaps = 1/228 (0%)
 Frame = -1

Query: 977 MPKSKRNRQVTLSKTKKKGRDHKEVIVNSIREAAEKYSSVYVFSFENMRNQKFKEFREQL 798
           MPKSKRN+QVTLSKT KKGR HKE+I+N IR+AAEKYSS+YVF+F+NMRN K KEFREQL
Sbjct: 1   MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60

Query: 797 KSSSRFFLGSNKVMQVALGRSASDEIQPGLYKVSKLLRGDAGMVFTNLPKEEIERLFNAF 618
           +SSS+FFLGSNKVMQVA+GRS+SDEI+P L+KVSKLLRGDAGM+FTNL KEE+ERLFN F
Sbjct: 61  QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120

Query: 617 EEYDFARTGGIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 438
           E YDFARTG IATEKV+LKEGPLEQFTH+MEPFLR+QGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRRQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 437 KPLSPEASRILRLMGIKMATFRLNLICRW-SPDDFEVYIDGPGDSDVE 297
           KPLSPEASRILRLMG  MATFRLNL+CRW S DDFE+YIDGPGDSDVE
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE 228


>gb|AFK34090.1| unknown [Lotus japonicus]
          Length = 233

 Score =  342 bits (878), Expect(2) = e-107
 Identities = 170/186 (91%), Positives = 181/186 (97%)
 Frame = -1

Query: 977 MPKSKRNRQVTLSKTKKKGRDHKEVIVNSIREAAEKYSSVYVFSFENMRNQKFKEFREQL 798
           MPKSKRN+QVTLSKTKKKGR+HKEVIVN+IR+AAEKYSS+YVFSFENMRN KFKEFR+QL
Sbjct: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60

Query: 797 KSSSRFFLGSNKVMQVALGRSASDEIQPGLYKVSKLLRGDAGMVFTNLPKEEIERLFNAF 618
           KSSSRFFLGSNKVMQVALGRSASDEI+P LYKVSKLLRGD+GM FTNL KEE+ERLFN +
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120

Query: 617 EEYDFARTGGIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 438
           EEYDFARTGGIATEKVDL+EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 437 KPLSPE 420
           KPLSPE
Sbjct: 181 KPLSPE 186



 Score = 73.6 bits (179), Expect(2) = e-107
 Identities = 35/46 (76%), Positives = 36/46 (78%)
 Frame = -2

Query: 424 PRHLAYCV*WGSRWLHFDLT*SAGGVLMISKFTLMGLVIQMLNAHS 287
           P HLAYCV W SRWLHFD T  AGG+ MI  FTLM LVIQMLNAHS
Sbjct: 185 PEHLAYCVCWESRWLHFDFTWFAGGLPMILNFTLMDLVIQMLNAHS 230


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  383 bits (984), Expect = e-104
 Identities = 187/229 (81%), Positives = 213/229 (93%)
 Frame = -1

Query: 977 MPKSKRNRQVTLSKTKKKGRDHKEVIVNSIREAAEKYSSVYVFSFENMRNQKFKEFREQL 798
           MPKSKRNR VTLSKTKKKG++HKE IVNSIRE AEKYSS YVFSFENMRN KFKEFR+QL
Sbjct: 1   MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60

Query: 797 KSSSRFFLGSNKVMQVALGRSASDEIQPGLYKVSKLLRGDAGMVFTNLPKEEIERLFNAF 618
           KSSSRFFLGSNKVMQVALGRS SDEI+PGL+K+SKL+RGD+G+ FTNL KEE++RLFN +
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120

Query: 617 EEYDFARTGGIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 438
           EE+DFARTG  ATEKV+L+EGPL+QFTHEMEPFLRKQGMPVRLN+GVVELVSDFVVCEEG
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180

Query: 437 KPLSPEASRILRLMGIKMATFRLNLICRWSPDDFEVYIDGPGDSDVECS 291
           +PLSPEA+RILRL+G KMATFRL+LICRWSPD+FE+Y +G  +SD+E S
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229


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