BLASTX nr result

ID: Glycyrrhiza24_contig00010466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010466
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycin...   405   e-110
ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycin...   401   e-109
gb|AFK41044.1| unknown [Lotus japonicus]                              392   e-106
gb|AFK40378.1| unknown [Medicago truncatula]                          377   e-102
ref|XP_003602287.1| RNA-binding protein with multiple splicing [...   368   e-100

>ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
           gi|255640386|gb|ACU20480.1| unknown [Glycine max]
          Length = 230

 Score =  405 bits (1040), Expect = e-110
 Identities = 203/236 (86%), Positives = 217/236 (91%), Gaps = 1/236 (0%)
 Frame = +1

Query: 181 MSDAYWRYA-ESRHANAPSSIAGGGAGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRD 357
           MSDAYWRYA ESR A  PSSIAG    KRSRSDYDVSG HDLPSYFPHDDDRGGL+VIRD
Sbjct: 1   MSDAYWRYAAESRQA--PSSIAG----KRSRSDYDVSGVHDLPSYFPHDDDRGGLRVIRD 54

Query: 358 TESLDASYERYLRSAQVSSYGVGQSTRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEIL 537
           TESLDASYERYLRSAQVSSYG GQSTRT+ GR+P+ + DDSH+A+ GGVDR TNAKD++ 
Sbjct: 55  TESLDASYERYLRSAQVSSYGSGQSTRTIDGRIPNRAIDDSHVANIGGVDRGTNAKDKMP 114

Query: 538 GLSGGRSDHSLPPDATNTLFVEGLPSNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDP 717
           GLS GR+DHSLPPDAT+TLFVEGLPSNCTRREVAHIFRPFVGY+EVRLVSKESRQPGGDP
Sbjct: 115 GLSSGRADHSLPPDATSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDP 174

Query: 718 LVLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGFRGKR 885
           LVLCFVDF+SPAHAATAM+ALQGYKFDELDRNSVNLRFQFARYPGARSGG  RGKR
Sbjct: 175 LVLCFVDFMSPAHAATAMEALQGYKFDELDRNSVNLRFQFARYPGARSGGVHRGKR 230


>ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
           gi|255644702|gb|ACU22853.1| unknown [Glycine max]
          Length = 230

 Score =  401 bits (1031), Expect = e-109
 Identities = 200/236 (84%), Positives = 215/236 (91%), Gaps = 1/236 (0%)
 Frame = +1

Query: 181 MSDAYWRYA-ESRHANAPSSIAGGGAGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRD 357
           MSDAYWRYA ESR A  PSSIAG    KRSRSDYDVSG HDLP YFPHDDDRGGL+VIRD
Sbjct: 1   MSDAYWRYAAESRQA--PSSIAG----KRSRSDYDVSGVHDLPGYFPHDDDRGGLRVIRD 54

Query: 358 TESLDASYERYLRSAQVSSYGVGQSTRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEIL 537
           TESLDASYERYLRSAQVSSYG GQSTRT+ GR+P+ + DDSH+A+ GG+DR TNAKD++L
Sbjct: 55  TESLDASYERYLRSAQVSSYGSGQSTRTISGRIPNRAIDDSHVANIGGIDRGTNAKDKML 114

Query: 538 GLSGGRSDHSLPPDATNTLFVEGLPSNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDP 717
           GLS GR+DHSLPPDAT+TLFVEGLP NCTRREVAHIF PFVGY+EVRLVSKESRQPGGDP
Sbjct: 115 GLSSGRTDHSLPPDATSTLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDP 174

Query: 718 LVLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGFRGKR 885
           LVLCFVDF+SPAHAATAM+ALQGYKFDELDRNSVNLRFQFARYPGARSGG  RGKR
Sbjct: 175 LVLCFVDFLSPAHAATAMEALQGYKFDELDRNSVNLRFQFARYPGARSGGVHRGKR 230


>gb|AFK41044.1| unknown [Lotus japonicus]
          Length = 232

 Score =  392 bits (1007), Expect = e-106
 Identities = 197/238 (82%), Positives = 213/238 (89%), Gaps = 3/238 (1%)
 Frame = +1

Query: 181 MSDAYWRYA-ESRHANAPSSIAGGGAGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRD 357
           MSDAYWRYA ESRH   PS+IA     KR+RSDYDVSG HD+P Y+PHDDDRGGL+VIRD
Sbjct: 1   MSDAYWRYAAESRHN--PSAIAA----KRARSDYDVSGVHDMPGYYPHDDDRGGLRVIRD 54

Query: 358 TESLDASYERYLRSAQVSSYGVGQSTRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEIL 537
           TESLDASYERYLRSAQVSS+G GQSTRT+ GR+PS+SFDDSH+ S GGVDR  +AK++IL
Sbjct: 55  TESLDASYERYLRSAQVSSFGEGQSTRTIRGRLPSHSFDDSHVTSIGGVDRGPSAKEKIL 114

Query: 538 GLSGGRSDHSLPPDATNTLFVEGLPSNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDP 717
           GLS GR DHSLPPDAT+TLFVEGLP+NC RREVAHIFRPFVGY+EVRLVSKESRQPGGDP
Sbjct: 115 GLSSGRPDHSLPPDATSTLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDP 174

Query: 718 LVLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARS--GGGFRGKR 885
           LVLCFVDF SPAHAATA DALQGYKFDELDRNS NLRFQFARYPGARS  GGGFRGKR
Sbjct: 175 LVLCFVDFESPAHAATAKDALQGYKFDELDRNSANLRFQFARYPGARSGGGGGFRGKR 232


>gb|AFK40378.1| unknown [Medicago truncatula]
          Length = 228

 Score =  377 bits (967), Expect = e-102
 Identities = 191/235 (81%), Positives = 207/235 (88%)
 Frame = +1

Query: 181 MSDAYWRYAESRHANAPSSIAGGGAGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDT 360
           MSDAYWRYAES+  +AP +I G    KR R++YDVSG H+L +YFPHDDDRG LQVIRDT
Sbjct: 1   MSDAYWRYAESQQ-HAPPTIPG----KRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDT 55

Query: 361 ESLDASYERYLRSAQVSSYGVGQSTRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILG 540
           ESLDASYERYLR+A +SS+G GQSTRT+ G VPS+S DDSH+ S GGVDRRTN K +IL 
Sbjct: 56  ESLDASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKGQILE 114

Query: 541 LSGGRSDHSLPPDATNTLFVEGLPSNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDPL 720
           LSGGR DHSLPP ATNTLFVEGLPSNCTRREVAHIFRPFVGY+EVRLVSKESRQPGGDPL
Sbjct: 115 LSGGRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPL 174

Query: 721 VLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGFRGKR 885
           +LCFVDFVSPAHAATAMDAL GYKFDELDRNSVNLRFQFAR PG RSGGG RGKR
Sbjct: 175 LLCFVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNPG-RSGGGHRGKR 228


>ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355491335|gb|AES72538.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 258

 Score =  368 bits (945), Expect(2) = e-100
 Identities = 190/239 (79%), Positives = 206/239 (86%), Gaps = 5/239 (2%)
 Frame = +1

Query: 181 MSDAYWRYAESRHANAPSSIAGGGAGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDT 360
           MSDAYWRYAES+  +AP +I G    KR R++YDVSG H+L +YFPHDDDRG LQVIRDT
Sbjct: 1   MSDAYWRYAESQQ-HAPPTIPG----KRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDT 55

Query: 361 ESLDASYERYLRSAQVSSYGVGQSTRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILG 540
           ESLDASYERYLR+A +SS+G GQSTRT+ G VPS+S DDSH+ S GGVDRRTN KD+IL 
Sbjct: 56  ESLDASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILE 114

Query: 541 LSGGRSDHSLPPDATNTLFVEGLPSNCTRREVAHI-----FRPFVGYREVRLVSKESRQP 705
           LSGGR DHSLPP ATNTLFVEGLPSNCTRREVA I     FRPFVGY+EVRLVSKESRQP
Sbjct: 115 LSGGRPDHSLPPGATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQP 174

Query: 706 GGDPLVLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGFRGK 882
           GGDPL+LCFVDFVSPAHAATAMDAL GYKFDELDRNSVNLRFQFAR PG RSGGG RGK
Sbjct: 175 GGDPLLLCFVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNPG-RSGGGHRGK 232



 Score = 23.5 bits (49), Expect(2) = e-100
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 938 ETSDASLAVENYSCVR 985
           E    SLAVENY+C R
Sbjct: 243 ERQVTSLAVENYNCFR 258


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