BLASTX nr result

ID: Glycyrrhiza24_contig00010441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010441
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   340   3e-91
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   336   4e-90
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...   293   4e-77
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...   291   1e-76
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   279   6e-73

>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  340 bits (871), Expect = 3e-91
 Identities = 164/238 (68%), Positives = 188/238 (78%)
 Frame = +1

Query: 91  EADSGERNWLDLPRDVVSMIFLKLGVIDTMIRAQRVCSVWRNITKDPFLWRTIDMHNTGD 270
           EA + ERNWLDLPRDV+  IF KLG  + + RAQ VCSVWR I+K+P LWRTIDM N GD
Sbjct: 6   EAAAEERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRNLGD 65

Query: 271 FDRGYDNDLLEILCRRVVDYSSGNLVDVNIEYFGTDDLLHYITYSTSHIRRLRLVCCYSI 450
              G D  LL  +C R +DYSSG+L+ +N+EYFGTDDLLH+IT+STS++R LRL CCY I
Sbjct: 66  I--GLDFHLLA-MCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACCYQI 122

Query: 451 SDEGLCEVAKKLPQXXXXXXXXXXXXXXXXEAIGRCCPHLKSLKFNMEGYRRPHIECDEE 630
           SDEGLCE+A+KLPQ                EAIG+CCPHLK+LKFNMEGYRRPHIECDEE
Sbjct: 123 SDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPHIECDEE 182

Query: 631 AIAVAETMPELRHLQLFGNKMTNVGLLAILDGCPHLESLDLRQCFNVNLGGNLGRRCA 804
           A A+AETMP L HLQLFGNK+TN GLLAILDGCP LESLDLRQCFNVNL G+LG+RCA
Sbjct: 183 AFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCA 240


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  336 bits (861), Expect = 4e-90
 Identities = 163/244 (66%), Positives = 190/244 (77%), Gaps = 3/244 (1%)
 Frame = +1

Query: 82  KAVEAD-SGERNWLDLPRDVVSMIFLKLGVIDTMIRAQRVCSVWRNITKDPFLWRTIDMH 258
           +AV AD   ERNWLDLPRDVV  IF KLG I+ + RAQRVCSVWR I+K+P LWRTIDM 
Sbjct: 8   EAVVADCEEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMR 67

Query: 259 NTGDFDRGYDNDLLEILCRRVVDYSSGNLVDVNIEYFGTDDLLHYITYSTSHIRRLRLVC 438
           N+GD +  +   +   +C R +DYSSG+L+ +NIEYF TDDLL +IT+STS++R LRL C
Sbjct: 68  NSGDIETNF---VFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLAC 124

Query: 439 CYSISDEGLCEVAKKLPQXXXXXXXXXXXXXXXX--EAIGRCCPHLKSLKFNMEGYRRPH 612
           CY ISDEGLCE+AK+LPQ                  EA+GRCC HLK+LKFNM+GYRRPH
Sbjct: 125 CYQISDEGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKGYRRPH 184

Query: 613 IECDEEAIAVAETMPELRHLQLFGNKMTNVGLLAILDGCPHLESLDLRQCFNVNLGGNLG 792
           IECDEEA A+AETMP L HLQLFGNK+TN GLLAILDGCPHLESLDLRQCFNVNL G+LG
Sbjct: 185 IECDEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLG 244

Query: 793 RRCA 804
           +RCA
Sbjct: 245 KRCA 248


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score =  293 bits (749), Expect = 4e-77
 Identities = 145/244 (59%), Positives = 174/244 (71%), Gaps = 9/244 (3%)
 Frame = +1

Query: 97  DSGERNWLDLPRDVVSMIFLKLGVIDTMIRAQRVCSVWRNITKDPFLWRTIDMHNTGDFD 276
           DSGERNWLDLPRD V  IF KL  ID ++RA  VC+ WR I+KDPFL+RTI+M N G+ D
Sbjct: 18  DSGERNWLDLPRDAVLSIFRKLDAIDLLVRAHNVCTTWRKISKDPFLFRTINMPNLGEPD 77

Query: 277 RGYDNDLLEILCRRVVDYSSGNLVDVNIEYFGTDDLLHYITYSTSHIRRLRLVCCYSISD 456
              D   LE LC+R VDYS G+++D+NIEYFGTDDLLH I  S SH++RLRL  C+SISD
Sbjct: 78  YQLD---LETLCQRAVDYSCGHIIDINIEYFGTDDLLHRIANSASHLQRLRLASCWSISD 134

Query: 457 EGLCEVAKKLPQXXXXXXXXXXXXXXXXEAIGRCCPHLKSLKFNMEGYRRPHIECDE--- 627
           EGLC+ A+K P                 E IGR CP LK+LKFN +GYR PHI+ D+   
Sbjct: 135 EGLCDAAEKFPCLEELDISISNLSDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDE 194

Query: 628 ------EAIAVAETMPELRHLQLFGNKMTNVGLLAILDGCPHLESLDLRQCFNVNLGGNL 789
                 EA A+A+ MP LRHLQL GN+MTN GL+A+LDGCPHLESLD+R+CFNVNL G L
Sbjct: 195 DAYDDNEAFAIAKYMPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTL 254

Query: 790 GRRC 801
           G+RC
Sbjct: 255 GKRC 258


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score =  291 bits (745), Expect = 1e-76
 Identities = 143/236 (60%), Positives = 172/236 (72%), Gaps = 1/236 (0%)
 Frame = +1

Query: 97  DSGERNWLDLPRDVVSMIFLKLGVIDTMIRAQRVCSVWRNITKDPFLWRTIDMHNTG-DF 273
           DSGERNWLDLP DVV  IF KL  ID + RA  VC+ WR I+KDPFL+ TIDM N G D 
Sbjct: 19  DSGERNWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTDL 78

Query: 274 DRGYDNDLLEILCRRVVDYSSGNLVDVNIEYFGTDDLLHYITYSTSHIRRLRLVCCYSIS 453
              +    LEILC+R VDYSSG   D+NIEYFGTDDLL +I  S +H++RLRL+ CY+++
Sbjct: 79  SSDF---YLEILCQRAVDYSSGQATDINIEYFGTDDLLRHIADSANHLQRLRLLGCYNVT 135

Query: 454 DEGLCEVAKKLPQXXXXXXXXXXXXXXXXEAIGRCCPHLKSLKFNMEGYRRPHIECDEEA 633
           DEGLCEVA KL                  EAIGRCCP LK+ KFN+EG+RRP +E D+EA
Sbjct: 136 DEGLCEVAGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDEA 195

Query: 634 IAVAETMPELRHLQLFGNKMTNVGLLAILDGCPHLESLDLRQCFNVNLGGNLGRRC 801
            ++A+TMP LRHL L GNKM+  GL AILDGCPHLESLD+RQCFN++L G+LG+RC
Sbjct: 196 FSIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRC 251


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  279 bits (713), Expect = 6e-73
 Identities = 138/239 (57%), Positives = 166/239 (69%), Gaps = 1/239 (0%)
 Frame = +1

Query: 91  EADSGERNWLDLPRDVVSMIFLKLGVIDTMIRAQRVCSVWRNITKDPFLWRTIDMHNTGD 270
           E +  ERNW +LPRDV SMI  KL  ++ +  AQ VCS WR + ++P +WR IDMHN GD
Sbjct: 12  EEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGD 71

Query: 271 F-DRGYDNDLLEILCRRVVDYSSGNLVDVNIEYFGTDDLLHYITYSTSHIRRLRLVCCYS 447
             D GYD   LE + R  VD S G L+ + I+ F TD+LL+YI   +SHIR LRLV CY 
Sbjct: 72  LCDLGYD---LEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYG 128

Query: 448 ISDEGLCEVAKKLPQXXXXXXXXXXXXXXXXEAIGRCCPHLKSLKFNMEGYRRPHIECDE 627
           ISD+GL E  K+LP                 EAIG+CCP LKS + N +G+R PHIECDE
Sbjct: 129 ISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDE 188

Query: 628 EAIAVAETMPELRHLQLFGNKMTNVGLLAILDGCPHLESLDLRQCFNVNLGGNLGRRCA 804
           EA+A+A+ MP L+ LQLFGNK+TN GLLAILDGC HLESLDLRQCFNVNLGGNL +RCA
Sbjct: 189 EALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCA 247


Top