BLASTX nr result

ID: Glycyrrhiza24_contig00010440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010440
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    98   8e-19
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    97   1e-18
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    97   1e-18
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    91   1e-16
ref|XP_002874852.1| hypothetical protein ARALYDRAFT_911821 [Arab...    84   2e-14

>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +3

Query: 3   TVWRNITKDPFLWRTIDMRYTGCFDRGYDNDLEILCRRIVDYSAGNLLDINIEYFGTDDL 182
           T WR I+KDPFL+RTI+M   G  +  Y  DLE LC+R VDYS G+++DINIEYFGTDDL
Sbjct: 53  TTWRKISKDPFLFRTINMPNLG--EPDYQLDLETLCQRAVDYSCGHIIDINIEYFGTDDL 110

Query: 183 LNYITDSTSHLRRLRL 230
           L+ I +S SHL+RLRL
Sbjct: 111 LHRIANSASHLQRLRL 126


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +3

Query: 3   TVWRNITKDPFLWRTIDMRYTGCFDRGYDNDLEILCRRIVDYSAGNLLDINIEYFGTDDL 182
           +VWR I+K+P LWRTIDMR  G  D G D  L  +C R +DYS+G+LL IN+EYFGTDDL
Sbjct: 43  SVWRAISKEPLLWRTIDMRNLG--DIGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDL 100

Query: 183 LNYITDSTSHLRRLRL 230
           L++IT STS+LR LRL
Sbjct: 101 LHHITHSTSNLRSLRL 116


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/76 (64%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   TVWRNITKDPFLWRTIDMRYTGCFDRGYDNDLEILCRRIVDYSAGNLLDINIEYFGTDDL 182
           T WR I+KDPFL+ TIDM   G  D   D  LEILC+R VDYS+G   DINIEYFGTDDL
Sbjct: 54  TTWRKISKDPFLYHTIDMPNIGT-DLSSDFYLEILCQRAVDYSSGQATDINIEYFGTDDL 112

Query: 183 LNYITDSTSHLRRLRL 230
           L +I DS +HL+RLRL
Sbjct: 113 LRHIADSANHLQRLRL 128


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   TVWRNITKDPFLWRTIDMRYTGCFDRGYDNDLEILCRRIVDYSAGNLLDINIEYFGTDDL 182
           +VWR I+K+P LWRTIDMR +G  +  +      +C R +DYS+G+LL INIEYF TDDL
Sbjct: 49  SVWRGISKEPLLWRTIDMRNSGDIETNFV--FLAMCHRAIDYSSGHLLHINIEYFATDDL 106

Query: 183 LNYITDSTSHLRRLRL 230
           L +IT STS+LR LRL
Sbjct: 107 LRHITHSTSNLRSLRL 122


>ref|XP_002874852.1| hypothetical protein ARALYDRAFT_911821 [Arabidopsis lyrata subsp.
           lyrata] gi|297320689|gb|EFH51111.1| hypothetical protein
           ARALYDRAFT_911821 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/75 (54%), Positives = 54/75 (72%)
 Frame = +3

Query: 6   VWRNITKDPFLWRTIDMRYTGCFDRGYDNDLEILCRRIVDYSAGNLLDINIEYFGTDDLL 185
           +WR + KDP++WR IDMR     + G   D+EI+CR  VD S G L++I+I YFGTD LL
Sbjct: 39  LWRRVCKDPWMWRRIDMRNPK--NLGGMIDMEIICRHAVDRSQGGLVEIDIGYFGTDSLL 96

Query: 186 NYITDSTSHLRRLRL 230
           NY+ DS+S+LR LRL
Sbjct: 97  NYMADSSSNLRSLRL 111