BLASTX nr result

ID: Glycyrrhiza24_contig00010439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010439
         (193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   109   3e-22
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    98   6e-19
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    94   1e-17
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    77   1e-12
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    77   1e-12

>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/63 (80%), Positives = 59/63 (93%)
 Frame = -3

Query: 191 AKKLPRLEELDISISNLSQDPLAAIGRCCPHLKSLKFNMEGFRRPHIEYDEEAIAIAKTM 12
           A+KLP+LEELDISISNL++DPL AIG+CCPHLK+LKFNMEG+RRPHIE DEEA AIA+TM
Sbjct: 131 AEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPHIECDEEAFAIAETM 190

Query: 11  PEL 3
           P L
Sbjct: 191 PGL 193


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/65 (73%), Positives = 57/65 (87%), Gaps = 2/65 (3%)
 Frame = -3

Query: 191 AKKLPRLEELDISIS--NLSQDPLAAIGRCCPHLKSLKFNMEGFRRPHIEYDEEAIAIAK 18
           AK+LP+LEELDISIS  N ++DPL A+GRCC HLK+LKFNM+G+RRPHIE DEEA AIA+
Sbjct: 137 AKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKGYRRPHIECDEEAFAIAE 196

Query: 17  TMPEL 3
           TMP L
Sbjct: 197 TMPTL 201


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = -3

Query: 191 AKKLPRLEELDISISNLSQDPLAAIGRCCPHLKSLKFNMEGFRRPHIEYDEEAIAIAKTM 12
           A KL  LEELDI+I +LS DPL AIGRCCP LK+ KFN+EGFRRP +E+D+EA +IAKTM
Sbjct: 143 AGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDEAFSIAKTM 202

Query: 11  PEL 3
           P L
Sbjct: 203 PGL 205


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/72 (58%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
 Frame = -3

Query: 191 AKKLPRLEELDISISNLSQDPLAAIGRCCPHLKSLKFNMEGFRRPHIEYDE--------- 39
           A+K P LEELDISISNLS      IGR CP LK+LKFN +G+R PHI+YD+         
Sbjct: 141 AEKFPCLEELDISISNLSDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDN 200

Query: 38  EAIAIAKTMPEL 3
           EA AIAK MP L
Sbjct: 201 EAFAIAKYMPGL 212


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -3

Query: 188 KKLPRLEELDISISNLSQDPLAAIGRCCPHLKSLKFNMEGFRRPHIEYDEEAIAIAKTMP 9
           K+LP L E+D+   + S++ L AIG+CCP LKS + N +GFR PHIE DEEA+AIA+ MP
Sbjct: 139 KRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAIAQNMP 198

Query: 8   EL 3
            L
Sbjct: 199 GL 200


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